← Back to variant description

GeneBe API Showcase

This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.

API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.

Documentation & Advanced Usage

Complete API documentation:docs.genebe.net/docs/api/overview/

Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/

Python client for pandas:pypi.org/project/genebe/

Java CLI for VCF files:github.com/pstawinski/genebe-cli

All tools documented at:docs.genebe.net

API Request Examples for Variant: 1-11796340-CCTT-C (hg38)

Bash / cURL Example

bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=1&pos=11796340&ref=CCTT&alt=C&genome=hg38&allGenes=true"

API Response

json
{
  "variants": [
    {
      "chr": "1",
      "pos": 11796340,
      "ref": "CCTT",
      "alt": "C",
      "effect": "conservative_inframe_deletion",
      "transcript": "ENST00000376590.9",
      "consequences": [
        {
          "aa_ref": "K",
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "conservative_inframe_deletion"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 12,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "MTHFR",
          "gene_hgnc_id": 7436,
          "hgvs_c": "c.643_645delAAG",
          "hgvs_p": "p.Lys215del",
          "transcript": "NM_005957.5",
          "protein_id": "NP_005948.3",
          "transcript_support_level": null,
          "aa_start": 215,
          "aa_end": null,
          "aa_length": 656,
          "cds_start": 643,
          "cds_end": null,
          "cds_length": 1971,
          "cdna_start": 735,
          "cdna_end": null,
          "cdna_length": 7018,
          "mane_select": "ENST00000376590.9",
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "K",
          "aa_alt": null,
          "canonical": true,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "conservative_inframe_deletion"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 12,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "MTHFR",
          "gene_hgnc_id": 7436,
          "hgvs_c": "c.643_645delAAG",
          "hgvs_p": "p.Lys215del",
          "transcript": "ENST00000376590.9",
          "protein_id": "ENSP00000365775.3",
          "transcript_support_level": 1,
          "aa_start": 215,
          "aa_end": null,
          "aa_length": 656,
          "cds_start": 643,
          "cds_end": null,
          "cds_length": 1971,
          "cdna_start": 735,
          "cdna_end": null,
          "cdna_length": 7018,
          "mane_select": "NM_005957.5",
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "K",
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "conservative_inframe_deletion"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 12,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "MTHFR",
          "gene_hgnc_id": 7436,
          "hgvs_c": "c.763_765delAAG",
          "hgvs_p": "p.Lys255del",
          "transcript": "ENST00000423400.7",
          "protein_id": "ENSP00000398908.3",
          "transcript_support_level": 1,
          "aa_start": 255,
          "aa_end": null,
          "aa_length": 696,
          "cds_start": 763,
          "cds_end": null,
          "cds_length": 2091,
          "cdna_start": 777,
          "cdna_end": null,
          "cdna_length": 2715,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "K",
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "conservative_inframe_deletion"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 12,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "MTHFR",
          "gene_hgnc_id": 7436,
          "hgvs_c": "c.643_645delAAG",
          "hgvs_p": "p.Lys215del",
          "transcript": "ENST00000376592.6",
          "protein_id": "ENSP00000365777.1",
          "transcript_support_level": 1,
          "aa_start": 215,
          "aa_end": null,
          "aa_length": 656,
          "cds_start": 643,
          "cds_end": null,
          "cds_length": 1971,
          "cdna_start": 2095,
          "cdna_end": null,
          "cdna_length": 8378,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "K",
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "conservative_inframe_deletion"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 5,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "MTHFR",
          "gene_hgnc_id": 7436,
          "hgvs_c": "c.643_645delAAG",
          "hgvs_p": "p.Lys215del",
          "transcript": "ENST00000376486.3",
          "protein_id": "ENSP00000365669.3",
          "transcript_support_level": 1,
          "aa_start": 215,
          "aa_end": null,
          "aa_length": 228,
          "cds_start": 643,
          "cds_end": null,
          "cds_length": 689,
          "cdna_start": 831,
          "cdna_end": null,
          "cdna_length": 875,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "K",
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "conservative_inframe_deletion"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 12,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "MTHFR",
          "gene_hgnc_id": 7436,
          "hgvs_c": "c.766_768delAAG",
          "hgvs_p": "p.Lys256del",
          "transcript": "NM_001330358.2",
          "protein_id": "NP_001317287.1",
          "transcript_support_level": null,
          "aa_start": 256,
          "aa_end": null,
          "aa_length": 697,
          "cds_start": 766,
          "cds_end": null,
          "cds_length": 2094,
          "cdna_start": 791,
          "cdna_end": null,
          "cdna_length": 7074,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "K",
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "conservative_inframe_deletion"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 12,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "MTHFR",
          "gene_hgnc_id": 7436,
          "hgvs_c": "c.766_768delAAG",
          "hgvs_p": "p.Lys256del",
          "transcript": "ENST00000376583.7",
          "protein_id": "ENSP00000365767.3",
          "transcript_support_level": 5,
          "aa_start": 256,
          "aa_end": null,
          "aa_length": 697,
          "cds_start": 766,
          "cds_end": null,
          "cds_length": 2094,
          "cdna_start": 768,
          "cdna_end": null,
          "cdna_length": 7044,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "K",
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "conservative_inframe_deletion"
          ],
          "exon_rank": 6,
          "exon_rank_end": null,
          "exon_count": 13,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "MTHFR",
          "gene_hgnc_id": 7436,
          "hgvs_c": "c.766_768delAAG",
          "hgvs_p": "p.Lys256del",
          "transcript": "ENST00000376585.6",
          "protein_id": "ENSP00000365770.1",
          "transcript_support_level": 5,
          "aa_start": 256,
          "aa_end": null,
          "aa_length": 697,
          "cds_start": 766,
          "cds_end": null,
          "cds_length": 2094,
          "cdna_start": 1820,
          "cdna_end": null,
          "cdna_length": 8094,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "K",
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "conservative_inframe_deletion"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 12,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "MTHFR",
          "gene_hgnc_id": 7436,
          "hgvs_c": "c.763_765delAAG",
          "hgvs_p": "p.Lys255del",
          "transcript": "NM_001410750.1",
          "protein_id": "NP_001397679.1",
          "transcript_support_level": null,
          "aa_start": 255,
          "aa_end": null,
          "aa_length": 696,
          "cds_start": 763,
          "cds_end": null,
          "cds_length": 2091,
          "cdna_start": 788,
          "cdna_end": null,
          "cdna_length": 7071,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "K",
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "conservative_inframe_deletion"
          ],
          "exon_rank": 4,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "MTHFR",
          "gene_hgnc_id": 7436,
          "hgvs_c": "c.643_645delAAG",
          "hgvs_p": "p.Lys215del",
          "transcript": "ENST00000641407.1",
          "protein_id": "ENSP00000493098.1",
          "transcript_support_level": null,
          "aa_start": 215,
          "aa_end": null,
          "aa_length": 642,
          "cds_start": 643,
          "cds_end": null,
          "cds_length": 1929,
          "cdna_start": 912,
          "cdna_end": null,
          "cdna_length": 2387,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "K",
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "conservative_inframe_deletion"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 12,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "MTHFR",
          "gene_hgnc_id": 7436,
          "hgvs_c": "c.766_768delAAG",
          "hgvs_p": "p.Lys256del",
          "transcript": "XM_011541496.4",
          "protein_id": "XP_011539798.1",
          "transcript_support_level": null,
          "aa_start": 256,
          "aa_end": null,
          "aa_length": 683,
          "cds_start": 766,
          "cds_end": null,
          "cds_length": 2052,
          "cdna_start": 791,
          "cdna_end": null,
          "cdna_length": 6892,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "K",
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "conservative_inframe_deletion"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 12,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "MTHFR",
          "gene_hgnc_id": 7436,
          "hgvs_c": "c.763_765delAAG",
          "hgvs_p": "p.Lys255del",
          "transcript": "XM_047421174.1",
          "protein_id": "XP_047277130.1",
          "transcript_support_level": null,
          "aa_start": 255,
          "aa_end": null,
          "aa_length": 682,
          "cds_start": 763,
          "cds_end": null,
          "cds_length": 2049,
          "cdna_start": 788,
          "cdna_end": null,
          "cdna_length": 6889,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "K",
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "conservative_inframe_deletion"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 12,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "MTHFR",
          "gene_hgnc_id": 7436,
          "hgvs_c": "c.643_645delAAG",
          "hgvs_p": "p.Lys215del",
          "transcript": "XM_005263462.5",
          "protein_id": "XP_005263519.1",
          "transcript_support_level": null,
          "aa_start": 215,
          "aa_end": null,
          "aa_length": 656,
          "cds_start": 643,
          "cds_end": null,
          "cds_length": 1971,
          "cdna_start": 732,
          "cdna_end": null,
          "cdna_length": 7015,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "K",
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "conservative_inframe_deletion"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 12,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "MTHFR",
          "gene_hgnc_id": 7436,
          "hgvs_c": "c.643_645delAAG",
          "hgvs_p": "p.Lys215del",
          "transcript": "XM_047421178.1",
          "protein_id": "XP_047277134.1",
          "transcript_support_level": null,
          "aa_start": 215,
          "aa_end": null,
          "aa_length": 656,
          "cds_start": 643,
          "cds_end": null,
          "cds_length": 1971,
          "cdna_start": 1273,
          "cdna_end": null,
          "cdna_length": 7556,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "K",
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "conservative_inframe_deletion"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 12,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "MTHFR",
          "gene_hgnc_id": 7436,
          "hgvs_c": "c.766_768delAAG",
          "hgvs_p": "p.Lys256del",
          "transcript": "XM_017001328.3",
          "protein_id": "XP_016856817.1",
          "transcript_support_level": null,
          "aa_start": 256,
          "aa_end": null,
          "aa_length": 647,
          "cds_start": 766,
          "cds_end": null,
          "cds_length": 1944,
          "cdna_start": 791,
          "cdna_end": null,
          "cdna_length": 6924,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "K",
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "conservative_inframe_deletion"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 12,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "MTHFR",
          "gene_hgnc_id": 7436,
          "hgvs_c": "c.643_645delAAG",
          "hgvs_p": "p.Lys215del",
          "transcript": "XM_047421179.1",
          "protein_id": "XP_047277135.1",
          "transcript_support_level": null,
          "aa_start": 215,
          "aa_end": null,
          "aa_length": 642,
          "cds_start": 643,
          "cds_end": null,
          "cds_length": 1929,
          "cdna_start": 735,
          "cdna_end": null,
          "cdna_length": 6836,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "K",
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "conservative_inframe_deletion"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 12,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "MTHFR",
          "gene_hgnc_id": 7436,
          "hgvs_c": "c.643_645delAAG",
          "hgvs_p": "p.Lys215del",
          "transcript": "XM_047421180.1",
          "protein_id": "XP_047277136.1",
          "transcript_support_level": null,
          "aa_start": 215,
          "aa_end": null,
          "aa_length": 606,
          "cds_start": 643,
          "cds_end": null,
          "cds_length": 1821,
          "cdna_start": 735,
          "cdna_end": null,
          "cdna_length": 6868,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "K",
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "conservative_inframe_deletion"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 12,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "MTHFR",
          "gene_hgnc_id": 7436,
          "hgvs_c": "c.643_645delAAG",
          "hgvs_p": "p.Lys215del",
          "transcript": "XM_047421181.1",
          "protein_id": "XP_047277137.1",
          "transcript_support_level": null,
          "aa_start": 215,
          "aa_end": null,
          "aa_length": 606,
          "cds_start": 643,
          "cds_end": null,
          "cds_length": 1821,
          "cdna_start": 732,
          "cdna_end": null,
          "cdna_length": 6865,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "K",
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "conservative_inframe_deletion"
          ],
          "exon_rank": 4,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "MTHFR",
          "gene_hgnc_id": 7436,
          "hgvs_c": "c.397_399delAAG",
          "hgvs_p": "p.Lys133del",
          "transcript": "XM_005263463.5",
          "protein_id": "XP_005263520.1",
          "transcript_support_level": null,
          "aa_start": 133,
          "aa_end": null,
          "aa_length": 574,
          "cds_start": 397,
          "cds_end": null,
          "cds_length": 1725,
          "cdna_start": 515,
          "cdna_end": null,
          "cdna_length": 6798,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 13,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "MTHFR",
          "gene_hgnc_id": 7436,
          "hgvs_c": "n.643_645delAAG",
          "hgvs_p": null,
          "transcript": "ENST00000641446.1",
          "protein_id": "ENSP00000493262.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 2820,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 4,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "MTHFR",
          "gene_hgnc_id": 7436,
          "hgvs_c": "n.*155_*157delAAG",
          "hgvs_p": null,
          "transcript": "ENST00000641747.1",
          "protein_id": "ENSP00000493116.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 3227,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "MTHFR",
          "gene_hgnc_id": 7436,
          "hgvs_c": "n.778_780delAAG",
          "hgvs_p": null,
          "transcript": "ENST00000641759.1",
          "protein_id": null,
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 2454,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "MTHFR",
          "gene_hgnc_id": 7436,
          "hgvs_c": "n.926_928delAAG",
          "hgvs_p": null,
          "transcript": "ENST00000641805.1",
          "protein_id": null,
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 2945,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "5_prime_UTR_variant"
          ],
          "exon_rank": 1,
          "exon_rank_end": null,
          "exon_count": 8,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "MTHFR",
          "gene_hgnc_id": 7436,
          "hgvs_c": "c.-93_-91delAAG",
          "hgvs_p": null,
          "transcript": "ENST00000641820.1",
          "protein_id": "ENSP00000492937.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 411,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": 1236,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 1569,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "3_prime_UTR_variant"
          ],
          "exon_rank": 4,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "MTHFR",
          "gene_hgnc_id": 7436,
          "hgvs_c": "n.*155_*157delAAG",
          "hgvs_p": null,
          "transcript": "ENST00000641747.1",
          "protein_id": "ENSP00000493116.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 3227,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 5,
          "intron_rank": 4,
          "intron_rank_end": null,
          "gene_symbol": "MTHFR",
          "gene_hgnc_id": 7436,
          "hgvs_c": "n.644-995_644-993delAAG",
          "hgvs_p": null,
          "transcript": "ENST00000641721.1",
          "protein_id": null,
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 891,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        }
      ],
      "gene_symbol": "MTHFR",
      "gene_hgnc_id": 7436,
      "dbsnp": "rs746353274",
      "frequency_reference_population": 0.000001239735,
      "hom_count_reference_population": 0,
      "allele_count_reference_population": 2,
      "gnomad_exomes_af": 6.84444e-7,
      "gnomad_genomes_af": 0.00000656996,
      "gnomad_exomes_ac": 1,
      "gnomad_genomes_ac": 1,
      "gnomad_exomes_homalt": 0,
      "gnomad_genomes_homalt": 0,
      "gnomad_mito_homoplasmic": null,
      "gnomad_mito_heteroplasmic": null,
      "computational_score_selected": null,
      "computational_prediction_selected": null,
      "computational_source_selected": null,
      "splice_score_selected": 0,
      "splice_prediction_selected": "Benign",
      "splice_source_selected": "max_spliceai",
      "revel_score": null,
      "revel_prediction": null,
      "alphamissense_score": null,
      "alphamissense_prediction": null,
      "bayesdelnoaf_score": null,
      "bayesdelnoaf_prediction": null,
      "phylop100way_score": 7.305,
      "phylop100way_prediction": "Uncertain_significance",
      "spliceai_max_score": 0,
      "spliceai_max_prediction": "Benign",
      "dbscsnv_ada_score": null,
      "dbscsnv_ada_prediction": null,
      "apogee2_score": null,
      "apogee2_prediction": null,
      "mitotip_score": null,
      "mitotip_prediction": null,
      "acmg_score": 3,
      "acmg_classification": "Uncertain_significance",
      "acmg_criteria": "PM2,PM4_Supporting",
      "acmg_by_gene": [
        {
          "score": 3,
          "benign_score": 0,
          "pathogenic_score": 3,
          "criteria": [
            "PM2",
            "PM4_Supporting"
          ],
          "verdict": "Uncertain_significance",
          "transcript": "ENST00000376590.9",
          "gene_symbol": "MTHFR",
          "hgnc_id": 7436,
          "effects": [
            "conservative_inframe_deletion"
          ],
          "inheritance_mode": "AR",
          "hgvs_c": "c.643_645delAAG",
          "hgvs_p": "p.Lys215del"
        }
      ],
      "clinvar_disease": "Homocystinuria due to methylene tetrahydrofolate reductase deficiency,not specified",
      "clinvar_classification": "Uncertain significance",
      "clinvar_review_status": "criteria provided, multiple submitters, no conflicts",
      "clinvar_submissions_summary": "US:2",
      "phenotype_combined": "Homocystinuria due to methylene tetrahydrofolate reductase deficiency|not specified",
      "pathogenicity_classification_combined": "Uncertain significance",
      "custom_annotations": null
    }
  ],
  "message": null
}