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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 1-231626881-G-A (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=1&pos=231626881&ref=G&alt=A&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "1",
"pos": 231626881,
"ref": "G",
"alt": "A",
"effect": "missense_variant",
"transcript": "ENST00000439617.8",
"consequences": [
{
"aa_ref": "G",
"aa_alt": "D",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 1,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DISC1",
"gene_hgnc_id": 2888,
"hgvs_c": "c.14G>A",
"hgvs_p": "p.Gly5Asp",
"transcript": "NM_018662.3",
"protein_id": "NP_061132.2",
"transcript_support_level": null,
"aa_start": 5,
"aa_end": null,
"aa_length": 854,
"cds_start": 14,
"cds_end": null,
"cds_length": 2565,
"cdna_start": 92,
"cdna_end": null,
"cdna_length": 7084,
"mane_select": "ENST00000439617.8",
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "G",
"aa_alt": "D",
"canonical": true,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 1,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DISC1",
"gene_hgnc_id": 2888,
"hgvs_c": "c.14G>A",
"hgvs_p": "p.Gly5Asp",
"transcript": "ENST00000439617.8",
"protein_id": "ENSP00000403888.4",
"transcript_support_level": 5,
"aa_start": 5,
"aa_end": null,
"aa_length": 854,
"cds_start": 14,
"cds_end": null,
"cds_length": 2565,
"cdna_start": 92,
"cdna_end": null,
"cdna_length": 7084,
"mane_select": "NM_018662.3",
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "G",
"aa_alt": "D",
"canonical": true,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 1,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DISC1",
"gene_hgnc_id": 2888,
"hgvs_c": "c.14G>A",
"hgvs_p": "p.Gly5Asp",
"transcript": "ENST00000366637.8",
"protein_id": "ENSP00000355597.6",
"transcript_support_level": 5,
"aa_start": 5,
"aa_end": null,
"aa_length": 832,
"cds_start": 14,
"cds_end": null,
"cds_length": 2499,
"cdna_start": 67,
"cdna_end": null,
"cdna_length": 6848,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "G",
"aa_alt": "D",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 1,
"exon_rank_end": null,
"exon_count": 10,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DISC1",
"gene_hgnc_id": 2888,
"hgvs_c": "c.14G>A",
"hgvs_p": "p.Gly5Asp",
"transcript": "ENST00000366633.7",
"protein_id": "ENSP00000355593.3",
"transcript_support_level": 1,
"aa_start": 5,
"aa_end": null,
"aa_length": 755,
"cds_start": 14,
"cds_end": null,
"cds_length": 2268,
"cdna_start": 67,
"cdna_end": null,
"cdna_length": 2676,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "G",
"aa_alt": "D",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 1,
"exon_rank_end": null,
"exon_count": 10,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DISC1",
"gene_hgnc_id": 2888,
"hgvs_c": "c.14G>A",
"hgvs_p": "p.Gly5Asp",
"transcript": "ENST00000535983.5",
"protein_id": "ENSP00000443996.1",
"transcript_support_level": 1,
"aa_start": 5,
"aa_end": null,
"aa_length": 695,
"cds_start": 14,
"cds_end": null,
"cds_length": 2088,
"cdna_start": 67,
"cdna_end": null,
"cdna_length": 2505,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "G",
"aa_alt": "D",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 1,
"exon_rank_end": null,
"exon_count": 10,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DISC1",
"gene_hgnc_id": 2888,
"hgvs_c": "c.14G>A",
"hgvs_p": "p.Gly5Asp",
"transcript": "ENST00000366636.8",
"protein_id": "ENSP00000355596.4",
"transcript_support_level": 1,
"aa_start": 5,
"aa_end": null,
"aa_length": 678,
"cds_start": 14,
"cds_end": null,
"cds_length": 2037,
"cdna_start": 67,
"cdna_end": null,
"cdna_length": 2224,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "G",
"aa_alt": "D",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 1,
"exon_rank_end": null,
"exon_count": 9,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DISC1",
"gene_hgnc_id": 2888,
"hgvs_c": "c.14G>A",
"hgvs_p": "p.Gly5Asp",
"transcript": "ENST00000602281.5",
"protein_id": "ENSP00000473425.1",
"transcript_support_level": 1,
"aa_start": 5,
"aa_end": null,
"aa_length": 662,
"cds_start": 14,
"cds_end": null,
"cds_length": 1989,
"cdna_start": 67,
"cdna_end": null,
"cdna_length": 2761,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "G",
"aa_alt": "D",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 1,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DISC1",
"gene_hgnc_id": 2888,
"hgvs_c": "c.14G>A",
"hgvs_p": "p.Gly5Asp",
"transcript": "ENST00000539444.5",
"protein_id": "ENSP00000440953.1",
"transcript_support_level": 1,
"aa_start": 5,
"aa_end": null,
"aa_length": 579,
"cds_start": 14,
"cds_end": null,
"cds_length": 1740,
"cdna_start": 67,
"cdna_end": null,
"cdna_length": 2658,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "G",
"aa_alt": "D",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 1,
"exon_rank_end": null,
"exon_count": 7,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DISC1",
"gene_hgnc_id": 2888,
"hgvs_c": "c.14G>A",
"hgvs_p": "p.Gly5Asp",
"transcript": "ENST00000628350.2",
"protein_id": "ENSP00000487190.1",
"transcript_support_level": 1,
"aa_start": 5,
"aa_end": null,
"aa_length": 559,
"cds_start": 14,
"cds_end": null,
"cds_length": 1680,
"cdna_start": 67,
"cdna_end": null,
"cdna_length": 2363,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "G",
"aa_alt": "D",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 1,
"exon_rank_end": null,
"exon_count": 3,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DISC1",
"gene_hgnc_id": 2888,
"hgvs_c": "c.14G>A",
"hgvs_p": "p.Gly5Asp",
"transcript": "ENST00000317586.8",
"protein_id": "ENSP00000320784.4",
"transcript_support_level": 1,
"aa_start": 5,
"aa_end": null,
"aa_length": 369,
"cds_start": 14,
"cds_end": null,
"cds_length": 1110,
"cdna_start": 67,
"cdna_end": null,
"cdna_length": 2636,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "G",
"aa_alt": "D",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 1,
"exon_rank_end": null,
"exon_count": 5,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DISC1",
"gene_hgnc_id": 2888,
"hgvs_c": "c.14G>A",
"hgvs_p": "p.Gly5Asp",
"transcript": "ENST00000602873.5",
"protein_id": "ENSP00000473386.1",
"transcript_support_level": 1,
"aa_start": 5,
"aa_end": null,
"aa_length": 201,
"cds_start": 14,
"cds_end": null,
"cds_length": 606,
"cdna_start": 67,
"cdna_end": null,
"cdna_length": 1553,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": true,
"consequences": [
"non_coding_transcript_exon_variant"
],
"exon_rank": 1,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DISC1",
"gene_hgnc_id": 2888,
"hgvs_c": "n.14G>A",
"hgvs_p": null,
"transcript": "ENST00000422590.6",
"protein_id": "ENSP00000415147.2",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": -4,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 2939,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": true,
"protein_coding": false,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": 5,
"intron_rank_end": null,
"gene_symbol": "TSNAX-DISC1",
"gene_hgnc_id": 49177,
"hgvs_c": "n.495+65626G>A",
"hgvs_p": null,
"transcript": "ENST00000602956.5",
"protein_id": "ENSP00000473532.1",
"transcript_support_level": 2,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": -4,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 3294,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "G",
"aa_alt": "D",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 1,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DISC1",
"gene_hgnc_id": 2888,
"hgvs_c": "c.14G>A",
"hgvs_p": "p.Gly5Asp",
"transcript": "NM_001164537.2",
"protein_id": "NP_001158009.1",
"transcript_support_level": null,
"aa_start": 5,
"aa_end": null,
"aa_length": 886,
"cds_start": 14,
"cds_end": null,
"cds_length": 2661,
"cdna_start": 92,
"cdna_end": null,
"cdna_length": 7180,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "G",
"aa_alt": "D",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 1,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DISC1",
"gene_hgnc_id": 2888,
"hgvs_c": "c.14G>A",
"hgvs_p": "p.Gly5Asp",
"transcript": "NM_001012957.2",
"protein_id": "NP_001012975.1",
"transcript_support_level": null,
"aa_start": 5,
"aa_end": null,
"aa_length": 832,
"cds_start": 14,
"cds_end": null,
"cds_length": 2499,
"cdna_start": 92,
"cdna_end": null,
"cdna_length": 7018,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "G",
"aa_alt": "D",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 1,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DISC1",
"gene_hgnc_id": 2888,
"hgvs_c": "c.14G>A",
"hgvs_p": "p.Gly5Asp",
"transcript": "NM_001164538.2",
"protein_id": "NP_001158010.1",
"transcript_support_level": null,
"aa_start": 5,
"aa_end": null,
"aa_length": 803,
"cds_start": 14,
"cds_end": null,
"cds_length": 2412,
"cdna_start": 92,
"cdna_end": null,
"cdna_length": 2990,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "G",
"aa_alt": "D",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 1,
"exon_rank_end": null,
"exon_count": 10,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DISC1",
"gene_hgnc_id": 2888,
"hgvs_c": "c.14G>A",
"hgvs_p": "p.Gly5Asp",
"transcript": "NM_001164539.2",
"protein_id": "NP_001158011.1",
"transcript_support_level": null,
"aa_start": 5,
"aa_end": null,
"aa_length": 755,
"cds_start": 14,
"cds_end": null,
"cds_length": 2268,
"cdna_start": 92,
"cdna_end": null,
"cdna_length": 2701,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "G",
"aa_alt": "D",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 1,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DISC1",
"gene_hgnc_id": 2888,
"hgvs_c": "c.14G>A",
"hgvs_p": "p.Gly5Asp",
"transcript": "NM_001164540.2",
"protein_id": "NP_001158012.1",
"transcript_support_level": null,
"aa_start": 5,
"aa_end": null,
"aa_length": 732,
"cds_start": 14,
"cds_end": null,
"cds_length": 2199,
"cdna_start": 92,
"cdna_end": null,
"cdna_length": 6718,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "G",
"aa_alt": "D",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 1,
"exon_rank_end": null,
"exon_count": 10,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DISC1",
"gene_hgnc_id": 2888,
"hgvs_c": "c.14G>A",
"hgvs_p": "p.Gly5Asp",
"transcript": "NM_001164541.2",
"protein_id": "NP_001158013.1",
"transcript_support_level": null,
"aa_start": 5,
"aa_end": null,
"aa_length": 695,
"cds_start": 14,
"cds_end": null,
"cds_length": 2088,
"cdna_start": 92,
"cdna_end": null,
"cdna_length": 2929,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "G",
"aa_alt": "D",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 1,
"exon_rank_end": null,
"exon_count": 10,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DISC1",
"gene_hgnc_id": 2888,
"hgvs_c": "c.14G>A",
"hgvs_p": "p.Gly5Asp",
"transcript": "NM_001164542.2",
"protein_id": "NP_001158014.1",
"transcript_support_level": null,
"aa_start": 5,
"aa_end": null,
"aa_length": 681,
"cds_start": 14,
"cds_end": null,
"cds_length": 2046,
"cdna_start": 92,
"cdna_end": null,
"cdna_length": 2735,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "G",
"aa_alt": "D",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 1,
"exon_rank_end": null,
"exon_count": 10,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DISC1",
"gene_hgnc_id": 2888,
"hgvs_c": "c.14G>A",
"hgvs_p": "p.Gly5Asp",
"transcript": "NM_001012959.2",
"protein_id": "NP_001012977.1",
"transcript_support_level": null,
"aa_start": 5,
"aa_end": null,
"aa_length": 678,
"cds_start": 14,
"cds_end": null,
"cds_length": 2037,
"cdna_start": 92,
"cdna_end": null,
"cdna_length": 2245,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "G",
"aa_alt": "D",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 1,
"exon_rank_end": null,
"exon_count": 9,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DISC1",
"gene_hgnc_id": 2888,
"hgvs_c": "c.14G>A",
"hgvs_p": "p.Gly5Asp",
"transcript": "NM_001164544.2",
"protein_id": "NP_001158016.1",
"transcript_support_level": null,
"aa_start": 5,
"aa_end": null,
"aa_length": 662,
"cds_start": 14,
"cds_end": null,
"cds_length": 1989,
"cdna_start": 92,
"cdna_end": null,
"cdna_length": 2749,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "G",
"aa_alt": "D",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 1,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DISC1",
"gene_hgnc_id": 2888,
"hgvs_c": "c.14G>A",
"hgvs_p": "p.Gly5Asp",
"transcript": "ENST00000537876.5",
"protein_id": "ENSP00000440909.2",
"transcript_support_level": 2,
"aa_start": 5,
"aa_end": null,
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}