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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 1-62648117-A-G (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=1&pos=62648117&ref=A&alt=G&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "1",
"pos": 62648117,
"ref": "A",
"alt": "G",
"effect": "missense_variant",
"transcript": "NM_001367561.1",
"consequences": [
{
"aa_ref": "S",
"aa_alt": "P",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 6,
"exon_rank_end": null,
"exon_count": 50,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DOCK7",
"gene_hgnc_id": 19190,
"hgvs_c": "c.721T>C",
"hgvs_p": "p.Ser241Pro",
"transcript": "NM_001367561.1",
"protein_id": "NP_001354490.1",
"transcript_support_level": null,
"aa_start": 241,
"aa_end": null,
"aa_length": 2140,
"cds_start": 721,
"cds_end": null,
"cds_length": 6423,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "ENST00000635253.2",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001367561.1"
},
{
"aa_ref": "S",
"aa_alt": "P",
"canonical": true,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 6,
"exon_rank_end": null,
"exon_count": 50,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DOCK7",
"gene_hgnc_id": 19190,
"hgvs_c": "c.721T>C",
"hgvs_p": "p.Ser241Pro",
"transcript": "ENST00000635253.2",
"protein_id": "ENSP00000489124.1",
"transcript_support_level": 5,
"aa_start": 241,
"aa_end": null,
"aa_length": 2140,
"cds_start": 721,
"cds_end": null,
"cds_length": 6423,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "NM_001367561.1",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000635253.2"
},
{
"aa_ref": "S",
"aa_alt": "P",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 6,
"exon_rank_end": null,
"exon_count": 49,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DOCK7",
"gene_hgnc_id": 19190,
"hgvs_c": "c.721T>C",
"hgvs_p": "p.Ser241Pro",
"transcript": "ENST00000454575.6",
"protein_id": "ENSP00000413583.2",
"transcript_support_level": 1,
"aa_start": 241,
"aa_end": null,
"aa_length": 2129,
"cds_start": 721,
"cds_end": null,
"cds_length": 6390,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000454575.6"
},
{
"aa_ref": "S",
"aa_alt": "P",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 6,
"exon_rank_end": null,
"exon_count": 49,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DOCK7",
"gene_hgnc_id": 19190,
"hgvs_c": "c.721T>C",
"hgvs_p": "p.Ser241Pro",
"transcript": "ENST00000912940.1",
"protein_id": "ENSP00000582999.1",
"transcript_support_level": null,
"aa_start": 241,
"aa_end": null,
"aa_length": 2138,
"cds_start": 721,
"cds_end": null,
"cds_length": 6417,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000912940.1"
},
{
"aa_ref": "S",
"aa_alt": "P",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 6,
"exon_rank_end": null,
"exon_count": 50,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DOCK7",
"gene_hgnc_id": 19190,
"hgvs_c": "c.721T>C",
"hgvs_p": "p.Ser241Pro",
"transcript": "NM_001330614.2",
"protein_id": "NP_001317543.1",
"transcript_support_level": null,
"aa_start": 241,
"aa_end": null,
"aa_length": 2131,
"cds_start": 721,
"cds_end": null,
"cds_length": 6396,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001330614.2"
},
{
"aa_ref": "S",
"aa_alt": "P",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 6,
"exon_rank_end": null,
"exon_count": 50,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DOCK7",
"gene_hgnc_id": 19190,
"hgvs_c": "c.721T>C",
"hgvs_p": "p.Ser241Pro",
"transcript": "ENST00000251157.10",
"protein_id": "ENSP00000251157.6",
"transcript_support_level": 5,
"aa_start": 241,
"aa_end": null,
"aa_length": 2131,
"cds_start": 721,
"cds_end": null,
"cds_length": 6396,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000251157.10"
},
{
"aa_ref": "S",
"aa_alt": "P",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 6,
"exon_rank_end": null,
"exon_count": 49,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DOCK7",
"gene_hgnc_id": 19190,
"hgvs_c": "c.721T>C",
"hgvs_p": "p.Ser241Pro",
"transcript": "NM_001271999.2",
"protein_id": "NP_001258928.1",
"transcript_support_level": null,
"aa_start": 241,
"aa_end": null,
"aa_length": 2129,
"cds_start": 721,
"cds_end": null,
"cds_length": 6390,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001271999.2"
},
{
"aa_ref": "S",
"aa_alt": "P",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 6,
"exon_rank_end": null,
"exon_count": 49,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DOCK7",
"gene_hgnc_id": 19190,
"hgvs_c": "c.721T>C",
"hgvs_p": "p.Ser241Pro",
"transcript": "ENST00000912941.1",
"protein_id": "ENSP00000583000.1",
"transcript_support_level": null,
"aa_start": 241,
"aa_end": null,
"aa_length": 2126,
"cds_start": 721,
"cds_end": null,
"cds_length": 6381,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000912941.1"
},
{
"aa_ref": "S",
"aa_alt": "P",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 6,
"exon_rank_end": null,
"exon_count": 49,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DOCK7",
"gene_hgnc_id": 19190,
"hgvs_c": "c.721T>C",
"hgvs_p": "p.Ser241Pro",
"transcript": "NM_033407.4",
"protein_id": "NP_212132.2",
"transcript_support_level": null,
"aa_start": 241,
"aa_end": null,
"aa_length": 2109,
"cds_start": 721,
"cds_end": null,
"cds_length": 6330,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_033407.4"
},
{
"aa_ref": "S",
"aa_alt": "P",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 6,
"exon_rank_end": null,
"exon_count": 49,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DOCK7",
"gene_hgnc_id": 19190,
"hgvs_c": "c.721T>C",
"hgvs_p": "p.Ser241Pro",
"transcript": "ENST00000340370.10",
"protein_id": "ENSP00000340742.5",
"transcript_support_level": 2,
"aa_start": 241,
"aa_end": null,
"aa_length": 2109,
"cds_start": 721,
"cds_end": null,
"cds_length": 6330,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000340370.10"
},
{
"aa_ref": "S",
"aa_alt": "P",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 6,
"exon_rank_end": null,
"exon_count": 48,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DOCK7",
"gene_hgnc_id": 19190,
"hgvs_c": "c.721T>C",
"hgvs_p": "p.Ser241Pro",
"transcript": "ENST00000895032.1",
"protein_id": "ENSP00000565091.1",
"transcript_support_level": null,
"aa_start": 241,
"aa_end": null,
"aa_length": 2107,
"cds_start": 721,
"cds_end": null,
"cds_length": 6324,
"cdna_start": null,
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"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000895032.1"
},
{
"aa_ref": "S",
"aa_alt": "P",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 6,
"exon_rank_end": null,
"exon_count": 48,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DOCK7",
"gene_hgnc_id": 19190,
"hgvs_c": "c.721T>C",
"hgvs_p": "p.Ser241Pro",
"transcript": "ENST00000912939.1",
"protein_id": "ENSP00000582998.1",
"transcript_support_level": null,
"aa_start": 241,
"aa_end": null,
"aa_length": 2104,
"cds_start": 721,
"cds_end": null,
"cds_length": 6315,
"cdna_start": null,
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"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000912939.1"
},
{
"aa_ref": "S",
"aa_alt": "P",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 6,
"exon_rank_end": null,
"exon_count": 49,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DOCK7",
"gene_hgnc_id": 19190,
"hgvs_c": "c.721T>C",
"hgvs_p": "p.Ser241Pro",
"transcript": "ENST00000941402.1",
"protein_id": "ENSP00000611461.1",
"transcript_support_level": null,
"aa_start": 241,
"aa_end": null,
"aa_length": 2103,
"cds_start": 721,
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"cds_length": 6312,
"cdna_start": null,
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"mane_select": null,
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"biotype": "protein_coding",
"feature": "ENST00000941402.1"
},
{
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"strand": false,
"consequences": [
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],
"exon_rank": 6,
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"intron_rank": null,
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"gene_symbol": "DOCK7",
"gene_hgnc_id": 19190,
"hgvs_c": "c.721T>C",
"hgvs_p": "p.Ser241Pro",
"transcript": "NM_001272000.2",
"protein_id": "NP_001258929.1",
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"mane_select": null,
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"biotype": "protein_coding",
"feature": "NM_001272000.2"
},
{
"aa_ref": "S",
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 6,
"exon_rank_end": null,
"exon_count": 49,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DOCK7",
"gene_hgnc_id": 19190,
"hgvs_c": "c.721T>C",
"hgvs_p": "p.Ser241Pro",
"transcript": "ENST00000634264.1",
"protein_id": "ENSP00000489284.1",
"transcript_support_level": 5,
"aa_start": 241,
"aa_end": null,
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"cds_start": 721,
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"mane_select": null,
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"biotype": "protein_coding",
"feature": "ENST00000634264.1"
},
{
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"protein_coding": true,
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],
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"gene_symbol": "DOCK7",
"gene_hgnc_id": 19190,
"hgvs_c": "c.721T>C",
"hgvs_p": "p.Ser241Pro",
"transcript": "NM_001272001.2",
"protein_id": "NP_001258930.1",
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"cds_start": 721,
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"mane_select": null,
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"biotype": "protein_coding",
"feature": "NM_001272001.2"
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 6,
"exon_rank_end": null,
"exon_count": 48,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DOCK7",
"gene_hgnc_id": 19190,
"hgvs_c": "c.721T>C",
"hgvs_p": "p.Ser241Pro",
"transcript": "ENST00000635123.1",
"protein_id": "ENSP00000489499.1",
"transcript_support_level": 5,
"aa_start": 241,
"aa_end": null,
"aa_length": 2098,
"cds_start": 721,
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"cdna_start": null,
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"biotype": "protein_coding",
"feature": "ENST00000635123.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 6,
"exon_rank_end": null,
"exon_count": 48,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DOCK7",
"gene_hgnc_id": 19190,
"hgvs_c": "c.721T>C",
"hgvs_p": "p.Ser241Pro",
"transcript": "ENST00000912938.1",
"protein_id": "ENSP00000582997.1",
"transcript_support_level": null,
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},
{
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"protein_coding": true,
"strand": false,
"consequences": [
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],
"exon_rank": 6,
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"exon_count": 48,
"intron_rank": null,
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"gene_symbol": "DOCK7",
"gene_hgnc_id": 19190,
"hgvs_c": "c.721T>C",
"hgvs_p": "p.Ser241Pro",
"transcript": "ENST00000895031.1",
"protein_id": "ENSP00000565090.1",
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"feature": "ENST00000895031.1"
},
{
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"strand": false,
"consequences": [
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],
"exon_rank": 6,
"exon_rank_end": null,
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"intron_rank": null,
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"gene_symbol": "DOCK7",
"gene_hgnc_id": 19190,
"hgvs_c": "c.721T>C",
"hgvs_p": "p.Ser241Pro",
"transcript": "ENST00000895033.1",
"protein_id": "ENSP00000565092.1",
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"biotype": "protein_coding",
"feature": "ENST00000895033.1"
},
{
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"aa_alt": "P",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 6,
"exon_rank_end": null,
"exon_count": 46,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DOCK7",
"gene_hgnc_id": 19190,
"hgvs_c": "c.721T>C",
"hgvs_p": "p.Ser241Pro",
"transcript": "ENST00000941404.1",
"protein_id": "ENSP00000611463.1",
"transcript_support_level": null,
"aa_start": 241,
"aa_end": null,
"aa_length": 2021,
"cds_start": 721,
"cds_end": null,
"cds_length": 6066,
"cdna_start": null,
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"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000941404.1"
},
{
"aa_ref": "S",
"aa_alt": "P",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 6,
"exon_rank_end": null,
"exon_count": 43,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DOCK7",
"gene_hgnc_id": 19190,
"hgvs_c": "c.721T>C",
"hgvs_p": "p.Ser241Pro",
"transcript": "ENST00000941403.1",
"protein_id": "ENSP00000611462.1",
"transcript_support_level": null,
"aa_start": 241,
"aa_end": null,
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"cds_end": null,
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"cdna_start": null,
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}
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}