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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 10-24503786-C-G (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=10&pos=24503786&ref=C&alt=G&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "10",
"pos": 24503786,
"ref": "C",
"alt": "G",
"effect": "intron_variant",
"transcript": "ENST00000376454.8",
"consequences": [
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 21,
"intron_rank": 9,
"intron_rank_end": null,
"gene_symbol": "KIAA1217",
"gene_hgnc_id": 25428,
"hgvs_c": "c.2001+2241C>G",
"hgvs_p": null,
"transcript": "NM_019590.5",
"protein_id": "NP_062536.2",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1943,
"cds_start": -4,
"cds_end": null,
"cds_length": 5832,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 7407,
"mane_select": "ENST00000376454.8",
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": true,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 21,
"intron_rank": 9,
"intron_rank_end": null,
"gene_symbol": "KIAA1217",
"gene_hgnc_id": 25428,
"hgvs_c": "c.2001+2241C>G",
"hgvs_p": null,
"transcript": "ENST00000376454.8",
"protein_id": "ENSP00000365637.3",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 1943,
"cds_start": -4,
"cds_end": null,
"cds_length": 5832,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 7407,
"mane_select": "NM_019590.5",
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 15,
"intron_rank": 4,
"intron_rank_end": null,
"gene_symbol": "KIAA1217",
"gene_hgnc_id": 25428,
"hgvs_c": "c.1050+2241C>G",
"hgvs_p": null,
"transcript": "ENST00000376451.4",
"protein_id": "ENSP00000365634.2",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 1465,
"cds_start": -4,
"cds_end": null,
"cds_length": 4398,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 7383,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 19,
"intron_rank": 8,
"intron_rank_end": null,
"gene_symbol": "KIAA1217",
"gene_hgnc_id": 25428,
"hgvs_c": "c.1896+2241C>G",
"hgvs_p": null,
"transcript": "ENST00000376452.7",
"protein_id": "ENSP00000365635.3",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 1374,
"cds_start": -4,
"cds_end": null,
"cds_length": 4125,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 6052,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 18,
"intron_rank": 8,
"intron_rank_end": null,
"gene_symbol": "KIAA1217",
"gene_hgnc_id": 25428,
"hgvs_c": "c.1896+2241C>G",
"hgvs_p": null,
"transcript": "ENST00000458595.5",
"protein_id": "ENSP00000392625.1",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 1349,
"cds_start": -4,
"cds_end": null,
"cds_length": 4050,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 5977,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 19,
"intron_rank": 10,
"intron_rank_end": null,
"gene_symbol": "KIAA1217",
"gene_hgnc_id": 25428,
"hgvs_c": "c.1761+2241C>G",
"hgvs_p": null,
"transcript": "ENST00000376462.5",
"protein_id": "ENSP00000365645.1",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 1264,
"cds_start": -4,
"cds_end": null,
"cds_length": 3795,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 6123,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": 4,
"intron_rank_end": null,
"gene_symbol": "KIAA1217",
"gene_hgnc_id": 25428,
"hgvs_c": "c.1050+2241C>G",
"hgvs_p": null,
"transcript": "ENST00000307544.10",
"protein_id": "ENSP00000302343.6",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 932,
"cds_start": -4,
"cds_end": null,
"cds_length": 2799,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 3281,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": 4,
"intron_rank_end": null,
"gene_symbol": "KIAA1217",
"gene_hgnc_id": 25428,
"hgvs_c": "c.1050+2241C>G",
"hgvs_p": null,
"transcript": "ENST00000396445.5",
"protein_id": "ENSP00000379722.1",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 906,
"cds_start": -4,
"cds_end": null,
"cds_length": 2721,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 5706,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": 4,
"intron_rank_end": null,
"gene_symbol": "KIAA1217",
"gene_hgnc_id": 25428,
"hgvs_c": "c.1050+2241C>G",
"hgvs_p": null,
"transcript": "ENST00000396446.5",
"protein_id": "ENSP00000379723.1",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 866,
"cds_start": -4,
"cds_end": null,
"cds_length": 2601,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 3059,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 20,
"intron_rank": 8,
"intron_rank_end": null,
"gene_symbol": "KIAA1217",
"gene_hgnc_id": 25428,
"hgvs_c": "c.1764+2241C>G",
"hgvs_p": null,
"transcript": "ENST00000696626.1",
"protein_id": "ENSP00000512763.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1864,
"cds_start": -4,
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"cdna_start": null,
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"cdna_length": 8471,
"mane_select": null,
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"biotype": null,
"feature": null
},
{
"aa_ref": null,
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 19,
"intron_rank": 8,
"intron_rank_end": null,
"gene_symbol": "KIAA1217",
"gene_hgnc_id": 25428,
"hgvs_c": "c.1896+2241C>G",
"hgvs_p": null,
"transcript": "NM_001282767.2",
"protein_id": "NP_001269696.1",
"transcript_support_level": null,
"aa_start": null,
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"cds_start": -4,
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"cdna_start": null,
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"feature": null
},
{
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"protein_coding": true,
"strand": true,
"consequences": [
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],
"exon_rank": null,
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"exon_count": 18,
"intron_rank": 8,
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"gene_symbol": "KIAA1217",
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"hgvs_c": "c.1896+2241C>G",
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"transcript": "NM_001282768.2",
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},
{
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"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 19,
"intron_rank": 10,
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"gene_symbol": "KIAA1217",
"gene_hgnc_id": 25428,
"hgvs_c": "c.1761+2241C>G",
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"transcript": "NM_001098500.3",
"protein_id": "NP_001091970.1",
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},
{
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"strand": true,
"consequences": [
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],
"exon_rank": null,
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"exon_count": 18,
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"gene_symbol": "KIAA1217",
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"hgvs_c": "c.1761+2241C>G",
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"transcript": "ENST00000430453.6",
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},
{
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],
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"intron_rank": 5,
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"gene_symbol": "KIAA1217",
"gene_hgnc_id": 25428,
"hgvs_c": "c.1155+2241C>G",
"hgvs_p": null,
"transcript": "NM_001321681.2",
"protein_id": "NP_001308610.1",
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},
{
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"strand": true,
"consequences": [
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],
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"intron_rank": 8,
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"gene_symbol": "KIAA1217",
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"hgvs_c": "c.1896+2241C>G",
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"transcript": "ENST00000376456.8",
"protein_id": "ENSP00000365639.4",
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},
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],
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"intron_rank": 4,
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"gene_symbol": "KIAA1217",
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"hgvs_c": "c.1050+2241C>G",
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"transcript": "NM_001282769.2",
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},
{
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"consequences": [
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],
"exon_rank": null,
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"exon_count": 12,
"intron_rank": 4,
"intron_rank_end": null,
"gene_symbol": "KIAA1217",
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"hgvs_c": "c.1050+2241C>G",
"hgvs_p": null,
"transcript": "NM_001282770.2",
"protein_id": "NP_001269699.1",
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},
{
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"strand": true,
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],
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"intron_rank": 7,
"intron_rank_end": null,
"gene_symbol": "KIAA1217",
"gene_hgnc_id": 25428,
"hgvs_c": "c.1446+2241C>G",
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"transcript": "ENST00000438429.5",
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},
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],
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"intron_rank": 2,
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"gene_symbol": "KIAA1217",
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"transcript": "ENST00000460373.1",
"protein_id": null,
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},
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],
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"intron_rank": 9,
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"feature": null
},
{
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"protein_coding": true,
"strand": true,
"consequences": [
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],
"exon_rank": null,
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"intron_rank": 9,
"intron_rank_end": null,
"gene_symbol": "KIAA1217",
"gene_hgnc_id": 25428,
"hgvs_c": "c.2001+2241C>G",
"hgvs_p": null,
"transcript": "XM_047425495.1",
"protein_id": "XP_047281451.1",
"transcript_support_level": null,
"aa_start": null,
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"cds_start": -4,
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"biotype": null,
"feature": null
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 20,
"intron_rank": 8,
"intron_rank_end": null,
"gene_symbol": "KIAA1217",
"gene_hgnc_id": 25428,
"hgvs_c": "c.1896+2241C>G",
"hgvs_p": null,
"transcript": "XM_017016417.2",
"protein_id": "XP_016871906.1",
"transcript_support_level": null,
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