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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 10-52650442-C-T (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=10&pos=52650442&ref=C&alt=T&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "10",
"pos": 52650442,
"ref": "C",
"alt": "T",
"effect": "intron_variant",
"transcript": "ENST00000443523.3",
"consequences": [
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 3,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "LNCAROD",
"gene_hgnc_id": 50913,
"hgvs_c": "n.124-89327G>A",
"hgvs_p": null,
"transcript": "ENST00000443523.3",
"protein_id": null,
"transcript_support_level": 2,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": -4,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 395,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 3,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "LNCAROD",
"gene_hgnc_id": 50913,
"hgvs_c": "n.222-89327G>A",
"hgvs_p": null,
"transcript": "ENST00000448017.3",
"protein_id": null,
"transcript_support_level": 2,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": -4,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 771,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 7,
"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "LNCAROD",
"gene_hgnc_id": 50913,
"hgvs_c": "n.248+73428G>A",
"hgvs_p": null,
"transcript": "ENST00000647908.1",
"protein_id": null,
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": -4,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 815,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 4,
"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "LNCAROD",
"gene_hgnc_id": 50913,
"hgvs_c": "n.345+73454G>A",
"hgvs_p": null,
"transcript": "ENST00000687752.3",
"protein_id": null,
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": -4,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 617,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 4,
"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "LNCAROD",
"gene_hgnc_id": 50913,
"hgvs_c": "n.388+73454G>A",
"hgvs_p": null,
"transcript": "ENST00000691475.3",
"protein_id": null,
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": -4,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 660,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 5,
"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "LNCAROD",
"gene_hgnc_id": 50913,
"hgvs_c": "n.184+73454G>A",
"hgvs_p": null,
"transcript": "ENST00000736176.1",
"protein_id": null,
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": -4,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 571,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 5,
"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "LNCAROD",
"gene_hgnc_id": 50913,
"hgvs_c": "n.246+73454G>A",
"hgvs_p": null,
"transcript": "ENST00000736177.1",
"protein_id": null,
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": -4,
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"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 487,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 4,
"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "LNCAROD",
"gene_hgnc_id": 50913,
"hgvs_c": "n.229+73454G>A",
"hgvs_p": null,
"transcript": "ENST00000736178.1",
"protein_id": null,
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": -4,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 640,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 5,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "LNCAROD",
"gene_hgnc_id": 50913,
"hgvs_c": "n.205-36299G>A",
"hgvs_p": null,
"transcript": "ENST00000736179.1",
"protein_id": null,
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": -4,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 620,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 4,
"intron_rank": 1,
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"gene_symbol": "LNCAROD",
"gene_hgnc_id": 50913,
"hgvs_c": "n.203-36299G>A",
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"transcript": "ENST00000736180.1",
"protein_id": null,
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"mane_select": null,
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"feature": null
},
{
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"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 3,
"intron_rank": 1,
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"gene_symbol": "LNCAROD",
"gene_hgnc_id": 50913,
"hgvs_c": "n.158-89327G>A",
"hgvs_p": null,
"transcript": "ENST00000736181.1",
"protein_id": null,
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"aa_start": null,
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},
{
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"consequences": [
"intron_variant"
],
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"exon_count": 6,
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"gene_symbol": "LNCAROD",
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"hgvs_c": "n.258-36299G>A",
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"transcript": "ENST00000736182.1",
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},
{
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],
"exon_rank": null,
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"exon_count": 5,
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"gene_symbol": "LNCAROD",
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"hgvs_c": "n.248-36299G>A",
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},
{
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],
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"gene_symbol": "LNCAROD",
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},
{
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],
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},
{
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"strand": false,
"consequences": [
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],
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"gene_symbol": "LNCAROD",
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"hgvs_c": "n.251-36299G>A",
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"transcript": "ENST00000736186.1",
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},
{
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],
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},
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],
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"gene_symbol": "LNCAROD",
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"hgvs_c": "n.276+73428G>A",
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},
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],
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"exon_count": 6,
"intron_rank": 2,
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"gene_symbol": "LNCAROD",
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"hgvs_c": "n.246-36299G>A",
"hgvs_p": null,
"transcript": "ENST00000736189.1",
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},
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],
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"gene_symbol": "LNCAROD",
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],
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},
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],
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},
{
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],
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"exon_count": 3,
"intron_rank": 1,
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"gene_symbol": "LNCAROD",
"gene_hgnc_id": 50913,
"hgvs_c": "n.127-47406G>A",
"hgvs_p": null,
"transcript": "ENST00000736193.1",
"protein_id": null,
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},
{
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"consequences": [
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],
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"exon_count": 3,
"intron_rank": 2,
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"gene_symbol": "LNCAROD",
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}
],
"message": null
}