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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 10-5959733-C-G (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=10&pos=5959733&ref=C&alt=G&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "10",
"pos": 5959733,
"ref": "C",
"alt": "G",
"effect": "intron_variant",
"transcript": "ENST00000379977.8",
"consequences": [
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 7,
"intron_rank": 5,
"intron_rank_end": null,
"gene_symbol": "IL15RA",
"gene_hgnc_id": 5978,
"hgvs_c": "c.616+21G>C",
"hgvs_p": null,
"transcript": "NM_002189.4",
"protein_id": "NP_002180.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 267,
"cds_start": -4,
"cds_end": null,
"cds_length": 804,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 1566,
"mane_select": "ENST00000379977.8",
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": true,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 7,
"intron_rank": 5,
"intron_rank_end": null,
"gene_symbol": "IL15RA",
"gene_hgnc_id": 5978,
"hgvs_c": "c.616+21G>C",
"hgvs_p": null,
"transcript": "ENST00000379977.8",
"protein_id": "ENSP00000369312.3",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 267,
"cds_start": -4,
"cds_end": null,
"cds_length": 804,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 1566,
"mane_select": "NM_002189.4",
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": 6,
"intron_rank_end": null,
"gene_symbol": "IL15RA",
"gene_hgnc_id": 5978,
"hgvs_c": "c.874+21G>C",
"hgvs_p": null,
"transcript": "ENST00000397248.6",
"protein_id": "ENSP00000380421.3",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 353,
"cds_start": -4,
"cds_end": null,
"cds_length": 1062,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 1799,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": 6,
"intron_rank_end": null,
"gene_symbol": "IL15RA",
"gene_hgnc_id": 5978,
"hgvs_c": "c.769+21G>C",
"hgvs_p": null,
"transcript": "ENST00000622442.4",
"protein_id": "ENSP00000480949.1",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 346,
"cds_start": -4,
"cds_end": null,
"cds_length": 1041,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 1160,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": 6,
"intron_rank_end": null,
"gene_symbol": "IL15RA",
"gene_hgnc_id": 5978,
"hgvs_c": "c.769+21G>C",
"hgvs_p": null,
"transcript": "ENST00000620345.4",
"protein_id": "ENSP00000479839.1",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 331,
"cds_start": -4,
"cds_end": null,
"cds_length": 996,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 1115,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": 6,
"intron_rank_end": null,
"gene_symbol": "IL15RA",
"gene_hgnc_id": 5978,
"hgvs_c": "c.769+21G>C",
"hgvs_p": null,
"transcript": "ENST00000397251.7",
"protein_id": "ENSP00000380423.3",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 308,
"cds_start": -4,
"cds_end": null,
"cds_length": 927,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 1046,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 7,
"intron_rank": 6,
"intron_rank_end": null,
"gene_symbol": "IL15RA",
"gene_hgnc_id": 5978,
"hgvs_c": "c.769+21G>C",
"hgvs_p": null,
"transcript": "ENST00000620865.4",
"protein_id": "ENSP00000478525.1",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 305,
"cds_start": -4,
"cds_end": null,
"cds_length": 918,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 1037,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 7,
"intron_rank": 5,
"intron_rank_end": null,
"gene_symbol": "IL15RA",
"gene_hgnc_id": 5978,
"hgvs_c": "c.508+21G>C",
"hgvs_p": null,
"transcript": "ENST00000525219.6",
"protein_id": "ENSP00000431529.2",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 231,
"cds_start": -4,
"cds_end": null,
"cds_length": 696,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 1850,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 5,
"intron_rank": 3,
"intron_rank_end": null,
"gene_symbol": "IL15RA",
"gene_hgnc_id": 5978,
"hgvs_c": "n.637+21G>C",
"hgvs_p": null,
"transcript": "ENST00000379974.1",
"protein_id": null,
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": -4,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 1022,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 7,
"intron_rank": 5,
"intron_rank_end": null,
"gene_symbol": "IL15RA",
"gene_hgnc_id": 5978,
"hgvs_c": "n.797+21G>C",
"hgvs_p": null,
"transcript": "ENST00000534292.5",
"protein_id": null,
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": -4,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 1694,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": 6,
"intron_rank_end": null,
"gene_symbol": "IL15RA",
"gene_hgnc_id": 5978,
"hgvs_c": "c.874+21G>C",
"hgvs_p": null,
"transcript": "NM_001256765.1",
"protein_id": "NP_001243694.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 353,
"cds_start": -4,
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"cdna_start": null,
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"cdna_length": 1800,
"mane_select": null,
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"biotype": null,
"feature": null
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 7,
"intron_rank": 5,
"intron_rank_end": null,
"gene_symbol": "IL15RA",
"gene_hgnc_id": 5978,
"hgvs_c": "c.691+21G>C",
"hgvs_p": null,
"transcript": "NM_001351095.2",
"protein_id": "NP_001338024.1",
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"aa_start": null,
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"cds_start": -4,
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"cdna_start": null,
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"mane_select": null,
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"biotype": null,
"feature": null
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 7,
"intron_rank": 5,
"intron_rank_end": null,
"gene_symbol": "IL15RA",
"gene_hgnc_id": 5978,
"hgvs_c": "c.616+21G>C",
"hgvs_p": null,
"transcript": "ENST00000397255.7",
"protein_id": "ENSP00000380426.3",
"transcript_support_level": 5,
"aa_start": null,
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"cds_start": -4,
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"cds_length": 759,
"cdna_start": null,
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"mane_select": null,
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},
{
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"protein_coding": true,
"strand": false,
"consequences": [
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],
"exon_rank": null,
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"exon_count": 6,
"intron_rank": 4,
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"gene_symbol": "IL15RA",
"gene_hgnc_id": 5978,
"hgvs_c": "c.517+21G>C",
"hgvs_p": null,
"transcript": "NM_172200.3",
"protein_id": "NP_751950.2",
"transcript_support_level": null,
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},
{
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"strand": false,
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],
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"intron_rank": 4,
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"gene_symbol": "IL15RA",
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"hgvs_c": "c.517+21G>C",
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"transcript": "ENST00000528354.5",
"protein_id": "ENSP00000435454.1",
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"feature": null
},
{
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"strand": false,
"consequences": [
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],
"exon_rank": null,
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"exon_count": 7,
"intron_rank": 5,
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"gene_symbol": "IL15RA",
"gene_hgnc_id": 5978,
"hgvs_c": "c.508+21G>C",
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"transcript": "NM_001243539.2",
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},
{
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],
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"gene_symbol": "IL15RA",
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"hgvs_c": "c.517+21G>C",
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"transcript": "ENST00000530685.5",
"protein_id": "ENSP00000435995.1",
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"mane_select": null,
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},
{
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"strand": false,
"consequences": [
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],
"exon_rank": null,
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"exon_count": 8,
"intron_rank": 6,
"intron_rank_end": null,
"gene_symbol": "IL15RA",
"gene_hgnc_id": 5978,
"hgvs_c": "c.508+21G>C",
"hgvs_p": null,
"transcript": "NM_001351096.1",
"protein_id": "NP_001338025.1",
"transcript_support_level": null,
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},
{
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"protein_coding": true,
"strand": false,
"consequences": [
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],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 6,
"intron_rank": 3,
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"gene_symbol": "IL15RA",
"gene_hgnc_id": 5978,
"hgvs_c": "c.328+21G>C",
"hgvs_p": null,
"transcript": "ENST00000532039.5",
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},
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],
"exon_rank": null,
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"gene_symbol": "IL15RA",
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"transcript": "NM_001351097.2",
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},
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],
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"intron_rank": 2,
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"gene_symbol": "IL15RA",
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},
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"consequences": [
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],
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"exon_count": 8,
"intron_rank": 6,
"intron_rank_end": null,
"gene_symbol": "IL15RA",
"gene_hgnc_id": 5978,
"hgvs_c": "c.409+21G>C",
"hgvs_p": null,
"transcript": "ENST00000397246.7",
"protein_id": "ENSP00000380420.4",
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"mane_plus": null,
"biotype": null,
"feature": null
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 5,
"intron_rank": 3,
"intron_rank_end": null,
"gene_symbol": "IL15RA",
"gene_hgnc_id": 5978,
"hgvs_c": "c.322+21G>C",
"hgvs_p": null,
"transcript": "ENST00000397250.6",
"protein_id": "ENSP00000380422.2",
"transcript_support_level": 2,
"aa_start": null,
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},
{
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}