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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 12-110914290-C-G (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=12&pos=110914290&ref=C&alt=G&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "12",
"pos": 110914290,
"ref": "C",
"alt": "G",
"effect": "missense_variant,splice_region_variant",
"transcript": "NM_000432.4",
"consequences": [
{
"aa_ref": "G",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant",
"splice_region_variant"
],
"exon_rank": 4,
"exon_rank_end": null,
"exon_count": 7,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MYL2",
"gene_hgnc_id": 7583,
"hgvs_c": "c.170G>C",
"hgvs_p": "p.Gly57Ala",
"transcript": "NM_000432.4",
"protein_id": "NP_000423.2",
"transcript_support_level": null,
"aa_start": 57,
"aa_end": null,
"aa_length": 166,
"cds_start": 170,
"cds_end": null,
"cds_length": 501,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "ENST00000228841.15",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_000432.4"
},
{
"aa_ref": "G",
"aa_alt": "A",
"canonical": true,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant",
"splice_region_variant"
],
"exon_rank": 4,
"exon_rank_end": null,
"exon_count": 7,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MYL2",
"gene_hgnc_id": 7583,
"hgvs_c": "c.170G>C",
"hgvs_p": "p.Gly57Ala",
"transcript": "ENST00000228841.15",
"protein_id": "ENSP00000228841.8",
"transcript_support_level": 1,
"aa_start": 57,
"aa_end": null,
"aa_length": 166,
"cds_start": 170,
"cds_end": null,
"cds_length": 501,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "NM_000432.4",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000228841.15"
},
{
"aa_ref": "G",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 3,
"exon_rank_end": null,
"exon_count": 6,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MYL2",
"gene_hgnc_id": 7583,
"hgvs_c": "c.128G>C",
"hgvs_p": "p.Gly43Ala",
"transcript": "NM_001406745.1",
"protein_id": "NP_001393674.1",
"transcript_support_level": null,
"aa_start": 43,
"aa_end": null,
"aa_length": 152,
"cds_start": 128,
"cds_end": null,
"cds_length": 459,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001406745.1"
},
{
"aa_ref": "G",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 3,
"exon_rank_end": null,
"exon_count": 6,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MYL2",
"gene_hgnc_id": 7583,
"hgvs_c": "c.128G>C",
"hgvs_p": "p.Gly43Ala",
"transcript": "ENST00000548438.1",
"protein_id": "ENSP00000447154.1",
"transcript_support_level": 3,
"aa_start": 43,
"aa_end": null,
"aa_length": 152,
"cds_start": 128,
"cds_end": null,
"cds_length": 459,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000548438.1"
},
{
"aa_ref": "G",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant",
"splice_region_variant"
],
"exon_rank": 5,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MYL2",
"gene_hgnc_id": 7583,
"hgvs_c": "c.170G>C",
"hgvs_p": "p.Gly57Ala",
"transcript": "ENST00000713800.1",
"protein_id": "ENSP00000519106.1",
"transcript_support_level": null,
"aa_start": 57,
"aa_end": null,
"aa_length": 166,
"cds_start": 170,
"cds_end": null,
"cds_length": 501,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000713800.1"
},
{
"aa_ref": "G",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant",
"splice_region_variant"
],
"exon_rank": 5,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MYL2",
"gene_hgnc_id": 7583,
"hgvs_c": "c.170G>C",
"hgvs_p": "p.Gly57Ala",
"transcript": "ENST00000713803.1",
"protein_id": "ENSP00000519109.1",
"transcript_support_level": null,
"aa_start": 57,
"aa_end": null,
"aa_length": 166,
"cds_start": 170,
"cds_end": null,
"cds_length": 501,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000713803.1"
},
{
"aa_ref": "G",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant",
"splice_region_variant"
],
"exon_rank": 5,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MYL2",
"gene_hgnc_id": 7583,
"hgvs_c": "c.170G>C",
"hgvs_p": "p.Gly57Ala",
"transcript": "ENST00000713804.1",
"protein_id": "ENSP00000519110.1",
"transcript_support_level": null,
"aa_start": 57,
"aa_end": null,
"aa_length": 166,
"cds_start": 170,
"cds_end": null,
"cds_length": 501,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000713804.1"
},
{
"aa_ref": "G",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant",
"splice_region_variant"
],
"exon_rank": 5,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MYL2",
"gene_hgnc_id": 7583,
"hgvs_c": "c.170G>C",
"hgvs_p": "p.Gly57Ala",
"transcript": "ENST00000713805.1",
"protein_id": "ENSP00000519111.1",
"transcript_support_level": null,
"aa_start": 57,
"aa_end": null,
"aa_length": 166,
"cds_start": 170,
"cds_end": null,
"cds_length": 501,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000713805.1"
},
{
"aa_ref": "G",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant",
"splice_region_variant"
],
"exon_rank": 6,
"exon_rank_end": null,
"exon_count": 9,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MYL2",
"gene_hgnc_id": 7583,
"hgvs_c": "c.170G>C",
"hgvs_p": "p.Gly57Ala",
"transcript": "ENST00000713806.1",
"protein_id": "ENSP00000519112.1",
"transcript_support_level": null,
"aa_start": 57,
"aa_end": null,
"aa_length": 166,
"cds_start": 170,
"cds_end": null,
"cds_length": 501,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000713806.1"
},
{
"aa_ref": "G",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant",
"splice_region_variant"
],
"exon_rank": 5,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MYL2",
"gene_hgnc_id": 7583,
"hgvs_c": "c.170G>C",
"hgvs_p": "p.Gly57Ala",
"transcript": "ENST00000713826.1",
"protein_id": "ENSP00000519130.1",
"transcript_support_level": null,
"aa_start": 57,
"aa_end": null,
"aa_length": 166,
"cds_start": 170,
"cds_end": null,
"cds_length": 501,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000713826.1"
},
{
"aa_ref": "G",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant",
"splice_region_variant"
],
"exon_rank": 5,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MYL2",
"gene_hgnc_id": 7583,
"hgvs_c": "c.170G>C",
"hgvs_p": "p.Gly57Ala",
"transcript": "ENST00000713828.1",
"protein_id": "ENSP00000519132.1",
"transcript_support_level": null,
"aa_start": 57,
"aa_end": null,
"aa_length": 166,
"cds_start": 170,
"cds_end": null,
"cds_length": 501,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000713828.1"
},
{
"aa_ref": "G",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant",
"splice_region_variant"
],
"exon_rank": 5,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MYL2",
"gene_hgnc_id": 7583,
"hgvs_c": "c.170G>C",
"hgvs_p": "p.Gly57Ala",
"transcript": "ENST00000713829.1",
"protein_id": "ENSP00000519133.1",
"transcript_support_level": null,
"aa_start": 57,
"aa_end": null,
"aa_length": 166,
"cds_start": 170,
"cds_end": null,
"cds_length": 501,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000713829.1"
},
{
"aa_ref": "G",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant",
"splice_region_variant"
],
"exon_rank": 5,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MYL2",
"gene_hgnc_id": 7583,
"hgvs_c": "c.170G>C",
"hgvs_p": "p.Gly57Ala",
"transcript": "ENST00000713830.1",
"protein_id": "ENSP00000519134.1",
"transcript_support_level": null,
"aa_start": 57,
"aa_end": null,
"aa_length": 166,
"cds_start": 170,
"cds_end": null,
"cds_length": 501,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000713830.1"
},
{
"aa_ref": "G",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant",
"splice_region_variant"
],
"exon_rank": 5,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MYL2",
"gene_hgnc_id": 7583,
"hgvs_c": "c.170G>C",
"hgvs_p": "p.Gly57Ala",
"transcript": "ENST00000713831.1",
"protein_id": "ENSP00000519135.1",
"transcript_support_level": null,
"aa_start": 57,
"aa_end": null,
"aa_length": 166,
"cds_start": 170,
"cds_end": null,
"cds_length": 501,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000713831.1"
},
{
"aa_ref": "G",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant",
"splice_region_variant"
],
"exon_rank": 4,
"exon_rank_end": null,
"exon_count": 7,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MYL2",
"gene_hgnc_id": 7583,
"hgvs_c": "c.170G>C",
"hgvs_p": "p.Gly57Ala",
"transcript": "ENST00000966752.1",
"protein_id": "ENSP00000636811.1",
"transcript_support_level": null,
"aa_start": 57,
"aa_end": null,
"aa_length": 165,
"cds_start": 170,
"cds_end": null,
"cds_length": 498,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000966752.1"
},
{
"aa_ref": "G",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant",
"splice_region_variant"
],
"exon_rank": 4,
"exon_rank_end": null,
"exon_count": 7,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MYL2",
"gene_hgnc_id": 7583,
"hgvs_c": "c.170G>C",
"hgvs_p": "p.Gly57Ala",
"transcript": "ENST00000880460.1",
"protein_id": "ENSP00000550519.1",
"transcript_support_level": null,
"aa_start": 57,
"aa_end": null,
"aa_length": 163,
"cds_start": 170,
"cds_end": null,
"cds_length": 492,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000880460.1"
},
{
"aa_ref": "G",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant",
"splice_region_variant"
],
"exon_rank": 4,
"exon_rank_end": null,
"exon_count": 7,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MYL2",
"gene_hgnc_id": 7583,
"hgvs_c": "c.149G>C",
"hgvs_p": "p.Gly50Ala",
"transcript": "ENST00000880461.1",
"protein_id": "ENSP00000550520.1",
"transcript_support_level": null,
"aa_start": 50,
"aa_end": null,
"aa_length": 159,
"cds_start": 149,
"cds_end": null,
"cds_length": 480,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000880461.1"
},
{
"aa_ref": "G",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant",
"splice_region_variant"
],
"exon_rank": 4,
"exon_rank_end": null,
"exon_count": 7,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MYL2",
"gene_hgnc_id": 7583,
"hgvs_c": "c.113G>C",
"hgvs_p": "p.Gly38Ala",
"transcript": "NM_001406916.1",
"protein_id": "NP_001393845.1",
"transcript_support_level": null,
"aa_start": 38,
"aa_end": null,
"aa_length": 147,
"cds_start": 113,
"cds_end": null,
"cds_length": 444,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001406916.1"
},
{
"aa_ref": "G",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant",
"splice_region_variant"
],
"exon_rank": 4,
"exon_rank_end": null,
"exon_count": 7,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MYL2",
"gene_hgnc_id": 7583,
"hgvs_c": "c.113G>C",
"hgvs_p": "p.Gly38Ala",
"transcript": "ENST00000663220.1",
"protein_id": "ENSP00000499568.1",
"transcript_support_level": null,
"aa_start": 38,
"aa_end": null,
"aa_length": 147,
"cds_start": 113,
"cds_end": null,
"cds_length": 444,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000663220.1"
},
{
"aa_ref": "G",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant",
"splice_region_variant"
],
"exon_rank": 4,
"exon_rank_end": null,
"exon_count": 7,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MYL2",
"gene_hgnc_id": 7583,
"hgvs_c": "c.170G>C",
"hgvs_p": "p.Gly57Ala",
"transcript": "ENST00000880458.1",
"protein_id": "ENSP00000550517.1",
"transcript_support_level": null,
"aa_start": 57,
"aa_end": null,
"aa_length": 147,
"cds_start": 170,
"cds_end": null,
"cds_length": 444,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000880458.1"
},
{
"aa_ref": "G",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant",
"splice_region_variant"
],
"exon_rank": 4,
"exon_rank_end": null,
"exon_count": 7,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MYL2",
"gene_hgnc_id": 7583,
"hgvs_c": "c.65G>C",
"hgvs_p": "p.Gly22Ala",
"transcript": "ENST00000713801.1",
"protein_id": "ENSP00000519107.1",
"transcript_support_level": null,
"aa_start": 22,
"aa_end": null,
"aa_length": 131,
"cds_start": 65,
"cds_end": null,
"cds_length": 396,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000713801.1"
},
{
"aa_ref": "G",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant",
"splice_region_variant"
],
"exon_rank": 4,
"exon_rank_end": null,
"exon_count": 7,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MYL2",
"gene_hgnc_id": 7583,
"hgvs_c": "c.65G>C",
"hgvs_p": "p.Gly22Ala",
"transcript": "ENST00000713827.1",
"protein_id": "ENSP00000519131.1",
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"dbscsnv_ada_prediction": "Pathogenic",
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{
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"verdict": "Likely_pathogenic",
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"clinvar_disease": "",
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"clinvar_review_status": "",
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"custom_annotations": null
}
],
"message": null
}