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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 14-23384597-G-T (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=14&pos=23384597&ref=G&alt=T&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "14",
"pos": 23384597,
"ref": "G",
"alt": "T",
"effect": "missense_variant",
"transcript": "NM_002471.4",
"consequences": [
{
"aa_ref": "Q",
"aa_alt": "K",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 36,
"exon_rank_end": null,
"exon_count": 39,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MYH6",
"gene_hgnc_id": 7576,
"hgvs_c": "c.5410C>A",
"hgvs_p": "p.Gln1804Lys",
"transcript": "NM_002471.4",
"protein_id": "NP_002462.2",
"transcript_support_level": null,
"aa_start": 1804,
"aa_end": null,
"aa_length": 1939,
"cds_start": 5410,
"cds_end": null,
"cds_length": 5820,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "ENST00000405093.9",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_002471.4"
},
{
"aa_ref": "Q",
"aa_alt": "K",
"canonical": true,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 36,
"exon_rank_end": null,
"exon_count": 39,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MYH6",
"gene_hgnc_id": 7576,
"hgvs_c": "c.5410C>A",
"hgvs_p": "p.Gln1804Lys",
"transcript": "ENST00000405093.9",
"protein_id": "ENSP00000386041.3",
"transcript_support_level": 5,
"aa_start": 1804,
"aa_end": null,
"aa_length": 1939,
"cds_start": 5410,
"cds_end": null,
"cds_length": 5820,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "NM_002471.4",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000405093.9"
},
{
"aa_ref": "Q",
"aa_alt": "K",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 36,
"exon_rank_end": null,
"exon_count": 39,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MYH6",
"gene_hgnc_id": 7576,
"hgvs_c": "c.5443C>A",
"hgvs_p": "p.Gln1815Lys",
"transcript": "ENST00000968262.1",
"protein_id": "ENSP00000638321.1",
"transcript_support_level": null,
"aa_start": 1815,
"aa_end": null,
"aa_length": 1950,
"cds_start": 5443,
"cds_end": null,
"cds_length": 5853,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000968262.1"
},
{
"aa_ref": "Q",
"aa_alt": "K",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 36,
"exon_rank_end": null,
"exon_count": 39,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MYH6",
"gene_hgnc_id": 7576,
"hgvs_c": "c.5410C>A",
"hgvs_p": "p.Gln1804Lys",
"transcript": "ENST00000968257.1",
"protein_id": "ENSP00000638316.1",
"transcript_support_level": null,
"aa_start": 1804,
"aa_end": null,
"aa_length": 1947,
"cds_start": 5410,
"cds_end": null,
"cds_length": 5844,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000968257.1"
},
{
"aa_ref": "Q",
"aa_alt": "K",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 36,
"exon_rank_end": null,
"exon_count": 39,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MYH6",
"gene_hgnc_id": 7576,
"hgvs_c": "c.5410C>A",
"hgvs_p": "p.Gln1804Lys",
"transcript": "ENST00000968271.1",
"protein_id": "ENSP00000638330.1",
"transcript_support_level": null,
"aa_start": 1804,
"aa_end": null,
"aa_length": 1946,
"cds_start": 5410,
"cds_end": null,
"cds_length": 5841,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000968271.1"
},
{
"aa_ref": "Q",
"aa_alt": "K",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 36,
"exon_rank_end": null,
"exon_count": 39,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MYH6",
"gene_hgnc_id": 7576,
"hgvs_c": "c.5428C>A",
"hgvs_p": "p.Gln1810Lys",
"transcript": "ENST00000968258.1",
"protein_id": "ENSP00000638317.1",
"transcript_support_level": null,
"aa_start": 1810,
"aa_end": null,
"aa_length": 1945,
"cds_start": 5428,
"cds_end": null,
"cds_length": 5838,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000968258.1"
},
{
"aa_ref": "Q",
"aa_alt": "K",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 36,
"exon_rank_end": null,
"exon_count": 39,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MYH6",
"gene_hgnc_id": 7576,
"hgvs_c": "c.5428C>A",
"hgvs_p": "p.Gln1810Lys",
"transcript": "ENST00000968274.1",
"protein_id": "ENSP00000638333.1",
"transcript_support_level": null,
"aa_start": 1810,
"aa_end": null,
"aa_length": 1945,
"cds_start": 5428,
"cds_end": null,
"cds_length": 5838,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000968274.1"
},
{
"aa_ref": "Q",
"aa_alt": "K",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 35,
"exon_rank_end": null,
"exon_count": 38,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MYH6",
"gene_hgnc_id": 7576,
"hgvs_c": "c.5428C>A",
"hgvs_p": "p.Gln1810Lys",
"transcript": "ENST00000968289.1",
"protein_id": "ENSP00000638348.1",
"transcript_support_level": null,
"aa_start": 1810,
"aa_end": null,
"aa_length": 1945,
"cds_start": 5428,
"cds_end": null,
"cds_length": 5838,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000968289.1"
},
{
"aa_ref": "Q",
"aa_alt": "K",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 36,
"exon_rank_end": null,
"exon_count": 39,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MYH6",
"gene_hgnc_id": 7576,
"hgvs_c": "c.5410C>A",
"hgvs_p": "p.Gln1804Lys",
"transcript": "ENST00000968250.1",
"protein_id": "ENSP00000638309.1",
"transcript_support_level": null,
"aa_start": 1804,
"aa_end": null,
"aa_length": 1939,
"cds_start": 5410,
"cds_end": null,
"cds_length": 5820,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000968250.1"
},
{
"aa_ref": "Q",
"aa_alt": "K",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 35,
"exon_rank_end": null,
"exon_count": 38,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MYH6",
"gene_hgnc_id": 7576,
"hgvs_c": "c.5410C>A",
"hgvs_p": "p.Gln1804Lys",
"transcript": "ENST00000968253.1",
"protein_id": "ENSP00000638312.1",
"transcript_support_level": null,
"aa_start": 1804,
"aa_end": null,
"aa_length": 1939,
"cds_start": 5410,
"cds_end": null,
"cds_length": 5820,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000968253.1"
},
{
"aa_ref": "Q",
"aa_alt": "K",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 36,
"exon_rank_end": null,
"exon_count": 39,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MYH6",
"gene_hgnc_id": 7576,
"hgvs_c": "c.5410C>A",
"hgvs_p": "p.Gln1804Lys",
"transcript": "ENST00000968255.1",
"protein_id": "ENSP00000638314.1",
"transcript_support_level": null,
"aa_start": 1804,
"aa_end": null,
"aa_length": 1939,
"cds_start": 5410,
"cds_end": null,
"cds_length": 5820,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000968255.1"
},
{
"aa_ref": "Q",
"aa_alt": "K",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 36,
"exon_rank_end": null,
"exon_count": 39,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MYH6",
"gene_hgnc_id": 7576,
"hgvs_c": "c.5410C>A",
"hgvs_p": "p.Gln1804Lys",
"transcript": "ENST00000968256.1",
"protein_id": "ENSP00000638315.1",
"transcript_support_level": null,
"aa_start": 1804,
"aa_end": null,
"aa_length": 1939,
"cds_start": 5410,
"cds_end": null,
"cds_length": 5820,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000968256.1"
},
{
"aa_ref": "Q",
"aa_alt": "K",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 36,
"exon_rank_end": null,
"exon_count": 39,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MYH6",
"gene_hgnc_id": 7576,
"hgvs_c": "c.5410C>A",
"hgvs_p": "p.Gln1804Lys",
"transcript": "ENST00000968259.1",
"protein_id": "ENSP00000638318.1",
"transcript_support_level": null,
"aa_start": 1804,
"aa_end": null,
"aa_length": 1939,
"cds_start": 5410,
"cds_end": null,
"cds_length": 5820,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000968259.1"
},
{
"aa_ref": "Q",
"aa_alt": "K",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 35,
"exon_rank_end": null,
"exon_count": 38,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MYH6",
"gene_hgnc_id": 7576,
"hgvs_c": "c.5410C>A",
"hgvs_p": "p.Gln1804Lys",
"transcript": "ENST00000968261.1",
"protein_id": "ENSP00000638320.1",
"transcript_support_level": null,
"aa_start": 1804,
"aa_end": null,
"aa_length": 1939,
"cds_start": 5410,
"cds_end": null,
"cds_length": 5820,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000968261.1"
},
{
"aa_ref": "Q",
"aa_alt": "K",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 36,
"exon_rank_end": null,
"exon_count": 39,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MYH6",
"gene_hgnc_id": 7576,
"hgvs_c": "c.5410C>A",
"hgvs_p": "p.Gln1804Lys",
"transcript": "ENST00000968281.1",
"protein_id": "ENSP00000638340.1",
"transcript_support_level": null,
"aa_start": 1804,
"aa_end": null,
"aa_length": 1939,
"cds_start": 5410,
"cds_end": null,
"cds_length": 5820,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000968281.1"
},
{
"aa_ref": "Q",
"aa_alt": "K",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 35,
"exon_rank_end": null,
"exon_count": 38,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MYH6",
"gene_hgnc_id": 7576,
"hgvs_c": "c.5410C>A",
"hgvs_p": "p.Gln1804Lys",
"transcript": "ENST00000968282.1",
"protein_id": "ENSP00000638341.1",
"transcript_support_level": null,
"aa_start": 1804,
"aa_end": null,
"aa_length": 1939,
"cds_start": 5410,
"cds_end": null,
"cds_length": 5820,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000968282.1"
},
{
"aa_ref": "Q",
"aa_alt": "K",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 36,
"exon_rank_end": null,
"exon_count": 39,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MYH6",
"gene_hgnc_id": 7576,
"hgvs_c": "c.5410C>A",
"hgvs_p": "p.Gln1804Lys",
"transcript": "ENST00000968283.1",
"protein_id": "ENSP00000638342.1",
"transcript_support_level": null,
"aa_start": 1804,
"aa_end": null,
"aa_length": 1939,
"cds_start": 5410,
"cds_end": null,
"cds_length": 5820,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000968283.1"
},
{
"aa_ref": "Q",
"aa_alt": "K",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 36,
"exon_rank_end": null,
"exon_count": 39,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MYH6",
"gene_hgnc_id": 7576,
"hgvs_c": "c.5410C>A",
"hgvs_p": "p.Gln1804Lys",
"transcript": "ENST00000968287.1",
"protein_id": "ENSP00000638346.1",
"transcript_support_level": null,
"aa_start": 1804,
"aa_end": null,
"aa_length": 1939,
"cds_start": 5410,
"cds_end": null,
"cds_length": 5820,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000968287.1"
},
{
"aa_ref": "Q",
"aa_alt": "K",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 35,
"exon_rank_end": null,
"exon_count": 38,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MYH6",
"gene_hgnc_id": 7576,
"hgvs_c": "c.5410C>A",
"hgvs_p": "p.Gln1804Lys",
"transcript": "ENST00000968288.1",
"protein_id": "ENSP00000638347.1",
"transcript_support_level": null,
"aa_start": 1804,
"aa_end": null,
"aa_length": 1939,
"cds_start": 5410,
"cds_end": null,
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"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000968288.1"
},
{
"aa_ref": "Q",
"aa_alt": "K",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 34,
"exon_rank_end": null,
"exon_count": 37,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MYH6",
"gene_hgnc_id": 7576,
"hgvs_c": "c.5410C>A",
"hgvs_p": "p.Gln1804Lys",
"transcript": "ENST00000968290.1",
"protein_id": "ENSP00000638349.1",
"transcript_support_level": null,
"aa_start": 1804,
"aa_end": null,
"aa_length": 1939,
"cds_start": 5410,
"cds_end": null,
"cds_length": 5820,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000968290.1"
},
{
"aa_ref": "Q",
"aa_alt": "K",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 36,
"exon_rank_end": null,
"exon_count": 39,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MYH6",
"gene_hgnc_id": 7576,
"hgvs_c": "c.5410C>A",
"hgvs_p": "p.Gln1804Lys",
"transcript": "ENST00000968252.1",
"protein_id": "ENSP00000638311.1",
"transcript_support_level": null,
"aa_start": 1804,
"aa_end": null,
"aa_length": 1938,
"cds_start": 5410,
"cds_end": null,
"cds_length": 5817,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000968252.1"
},
{
"aa_ref": "Q",
"aa_alt": "K",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 36,
"exon_rank_end": null,
"exon_count": 39,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MYH6",
"gene_hgnc_id": 7576,
"hgvs_c": "c.5407C>A",
"hgvs_p": "p.Gln1803Lys",
"transcript": "ENST00000968254.1",
"protein_id": "ENSP00000638313.1",
"transcript_support_level": null,
"aa_start": 1803,
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"mitotip_prediction": null,
"acmg_score": -20,
"acmg_classification": "Benign",
"acmg_criteria": "BP4_Strong,BP6_Very_Strong,BS1,BS2",
"acmg_by_gene": [
{
"score": -20,
"benign_score": 20,
"pathogenic_score": 0,
"criteria": [
"BP4_Strong",
"BP6_Very_Strong",
"BS1",
"BS2"
],
"verdict": "Benign",
"transcript": "NM_002471.4",
"gene_symbol": "MYH6",
"hgnc_id": 7576,
"effects": [
"missense_variant"
],
"inheritance_mode": "AD",
"hgvs_c": "c.5410C>A",
"hgvs_p": "p.Gln1804Lys"
}
],
"clinvar_disease": "Cardiomyopathy,Cardiovascular phenotype,Hypertrophic cardiomyopathy 14,MYH6-related disorder,not provided,not specified",
"clinvar_classification": "Benign/Likely benign",
"clinvar_review_status": "criteria provided, multiple submitters, no conflicts",
"clinvar_submissions_summary": "US:1 LB:4 B:1",
"phenotype_combined": "Hypertrophic cardiomyopathy 14|not specified|Cardiovascular phenotype|not provided|MYH6-related disorder|Cardiomyopathy",
"pathogenicity_classification_combined": "Benign/Likely benign",
"custom_annotations": null
}
],
"message": null
}