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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 14-23387652-C-T (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=14&pos=23387652&ref=C&alt=T&genome=hg38&allGenes=true"API Response
json
{
"message": null,
"variants": [
{
"acmg_by_gene": [
{
"benign_score": 18,
"criteria": [
"BP4_Moderate",
"BP6_Very_Strong",
"BA1"
],
"effects": [
"splice_region_variant",
"synonymous_variant"
],
"gene_symbol": "MYH6",
"hgnc_id": 7576,
"hgvs_c": "c.4527G>A",
"hgvs_p": "p.Glu1509Glu",
"inheritance_mode": "AD",
"pathogenic_score": 0,
"score": -18,
"transcript": "NM_002471.4",
"verdict": "Benign"
}
],
"acmg_classification": "Benign",
"acmg_criteria": "BP4_Moderate,BP6_Very_Strong,BA1",
"acmg_score": -18,
"allele_count_reference_population": 14084,
"alphamissense_prediction": null,
"alphamissense_score": null,
"alt": "T",
"apogee2_prediction": null,
"apogee2_score": null,
"bayesdelnoaf_prediction": "Benign",
"bayesdelnoaf_score": -0.19,
"chr": "14",
"clinvar_classification": "Benign",
"clinvar_disease": "Cardiovascular phenotype,Hypertrophic cardiomyopathy 14,not provided,not specified",
"clinvar_review_status": "criteria provided, multiple submitters, no conflicts",
"clinvar_submissions_summary": "B:8",
"computational_prediction_selected": "Benign",
"computational_score_selected": -0.1899999976158142,
"computational_source_selected": "BayesDel_noAF",
"consequences": [
{
"aa_alt": "E",
"aa_end": null,
"aa_length": 1939,
"aa_ref": "E",
"aa_start": 1509,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 5940,
"cdna_start": 4594,
"cds_end": null,
"cds_length": 5820,
"cds_start": 4527,
"consequences": [
"splice_region_variant",
"synonymous_variant"
],
"exon_count": 39,
"exon_rank": 32,
"exon_rank_end": null,
"feature": "NM_002471.4",
"gene_hgnc_id": 7576,
"gene_symbol": "MYH6",
"hgvs_c": "c.4527G>A",
"hgvs_p": "p.Glu1509Glu",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": "ENST00000405093.9",
"protein_coding": true,
"protein_id": "NP_002462.2",
"strand": false,
"transcript": "NM_002471.4",
"transcript_support_level": null
},
{
"aa_alt": "E",
"aa_end": null,
"aa_length": 1939,
"aa_ref": "E",
"aa_start": 1509,
"biotype": "protein_coding",
"canonical": true,
"cdna_end": null,
"cdna_length": 5940,
"cdna_start": 4594,
"cds_end": null,
"cds_length": 5820,
"cds_start": 4527,
"consequences": [
"splice_region_variant",
"synonymous_variant"
],
"exon_count": 39,
"exon_rank": 32,
"exon_rank_end": null,
"feature": "ENST00000405093.9",
"gene_hgnc_id": 7576,
"gene_symbol": "MYH6",
"hgvs_c": "c.4527G>A",
"hgvs_p": "p.Glu1509Glu",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": "NM_002471.4",
"protein_coding": true,
"protein_id": "ENSP00000386041.3",
"strand": false,
"transcript": "ENST00000405093.9",
"transcript_support_level": 5
},
{
"aa_alt": "E",
"aa_end": null,
"aa_length": 1950,
"aa_ref": "E",
"aa_start": 1520,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 6363,
"cdna_start": 4631,
"cds_end": null,
"cds_length": 5853,
"cds_start": 4560,
"consequences": [
"splice_region_variant",
"synonymous_variant"
],
"exon_count": 39,
"exon_rank": 32,
"exon_rank_end": null,
"feature": "ENST00000968262.1",
"gene_hgnc_id": 7576,
"gene_symbol": "MYH6",
"hgvs_c": "c.4560G>A",
"hgvs_p": "p.Glu1520Glu",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000638321.1",
"strand": false,
"transcript": "ENST00000968262.1",
"transcript_support_level": null
},
{
"aa_alt": "E",
"aa_end": null,
"aa_length": 1947,
"aa_ref": "E",
"aa_start": 1509,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 6407,
"cdna_start": 4626,
"cds_end": null,
"cds_length": 5844,
"cds_start": 4527,
"consequences": [
"splice_region_variant",
"synonymous_variant"
],
"exon_count": 39,
"exon_rank": 32,
"exon_rank_end": null,
"feature": "ENST00000968257.1",
"gene_hgnc_id": 7576,
"gene_symbol": "MYH6",
"hgvs_c": "c.4527G>A",
"hgvs_p": "p.Glu1509Glu",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000638316.1",
"strand": false,
"transcript": "ENST00000968257.1",
"transcript_support_level": null
},
{
"aa_alt": "E",
"aa_end": null,
"aa_length": 1946,
"aa_ref": "E",
"aa_start": 1509,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 5970,
"cdna_start": 4599,
"cds_end": null,
"cds_length": 5841,
"cds_start": 4527,
"consequences": [
"splice_region_variant",
"synonymous_variant"
],
"exon_count": 39,
"exon_rank": 32,
"exon_rank_end": null,
"feature": "ENST00000968271.1",
"gene_hgnc_id": 7576,
"gene_symbol": "MYH6",
"hgvs_c": "c.4527G>A",
"hgvs_p": "p.Glu1509Glu",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000638330.1",
"strand": false,
"transcript": "ENST00000968271.1",
"transcript_support_level": null
},
{
"aa_alt": "E",
"aa_end": null,
"aa_length": 1945,
"aa_ref": "E",
"aa_start": 1515,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 6380,
"cdna_start": 4647,
"cds_end": null,
"cds_length": 5838,
"cds_start": 4545,
"consequences": [
"splice_region_variant",
"synonymous_variant"
],
"exon_count": 39,
"exon_rank": 32,
"exon_rank_end": null,
"feature": "ENST00000968258.1",
"gene_hgnc_id": 7576,
"gene_symbol": "MYH6",
"hgvs_c": "c.4545G>A",
"hgvs_p": "p.Glu1515Glu",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000638317.1",
"strand": false,
"transcript": "ENST00000968258.1",
"transcript_support_level": null
},
{
"aa_alt": "E",
"aa_end": null,
"aa_length": 1945,
"aa_ref": "E",
"aa_start": 1515,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 6054,
"cdna_start": 4704,
"cds_end": null,
"cds_length": 5838,
"cds_start": 4545,
"consequences": [
"splice_region_variant",
"synonymous_variant"
],
"exon_count": 39,
"exon_rank": 32,
"exon_rank_end": null,
"feature": "ENST00000968274.1",
"gene_hgnc_id": 7576,
"gene_symbol": "MYH6",
"hgvs_c": "c.4545G>A",
"hgvs_p": "p.Glu1515Glu",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000638333.1",
"strand": false,
"transcript": "ENST00000968274.1",
"transcript_support_level": null
},
{
"aa_alt": "E",
"aa_end": null,
"aa_length": 1945,
"aa_ref": "E",
"aa_start": 1515,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 6107,
"cdna_start": 4758,
"cds_end": null,
"cds_length": 5838,
"cds_start": 4545,
"consequences": [
"splice_region_variant",
"synonymous_variant"
],
"exon_count": 38,
"exon_rank": 31,
"exon_rank_end": null,
"feature": "ENST00000968289.1",
"gene_hgnc_id": 7576,
"gene_symbol": "MYH6",
"hgvs_c": "c.4545G>A",
"hgvs_p": "p.Glu1515Glu",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000638348.1",
"strand": false,
"transcript": "ENST00000968289.1",
"transcript_support_level": null
},
{
"aa_alt": "E",
"aa_end": null,
"aa_length": 1939,
"aa_ref": "E",
"aa_start": 1509,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 6520,
"cdna_start": 4787,
"cds_end": null,
"cds_length": 5820,
"cds_start": 4527,
"consequences": [
"splice_region_variant",
"synonymous_variant"
],
"exon_count": 39,
"exon_rank": 32,
"exon_rank_end": null,
"feature": "ENST00000968250.1",
"gene_hgnc_id": 7576,
"gene_symbol": "MYH6",
"hgvs_c": "c.4527G>A",
"hgvs_p": "p.Glu1509Glu",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000638309.1",
"strand": false,
"transcript": "ENST00000968250.1",
"transcript_support_level": null
},
{
"aa_alt": "E",
"aa_end": null,
"aa_length": 1939,
"aa_ref": "E",
"aa_start": 1509,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 6410,
"cdna_start": 4655,
"cds_end": null,
"cds_length": 5820,
"cds_start": 4527,
"consequences": [
"splice_region_variant",
"synonymous_variant"
],
"exon_count": 38,
"exon_rank": 31,
"exon_rank_end": null,
"feature": "ENST00000968253.1",
"gene_hgnc_id": 7576,
"gene_symbol": "MYH6",
"hgvs_c": "c.4527G>A",
"hgvs_p": "p.Glu1509Glu",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000638312.1",
"strand": false,
"transcript": "ENST00000968253.1",
"transcript_support_level": null
},
{
"aa_alt": "E",
"aa_end": null,
"aa_length": 1939,
"aa_ref": "E",
"aa_start": 1509,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 6410,
"cdna_start": 4679,
"cds_end": null,
"cds_length": 5820,
"cds_start": 4527,
"consequences": [
"splice_region_variant",
"synonymous_variant"
],
"exon_count": 39,
"exon_rank": 32,
"exon_rank_end": null,
"feature": "ENST00000968255.1",
"gene_hgnc_id": 7576,
"gene_symbol": "MYH6",
"hgvs_c": "c.4527G>A",
"hgvs_p": "p.Glu1509Glu",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000638314.1",
"strand": false,
"transcript": "ENST00000968255.1",
"transcript_support_level": null
},
{
"aa_alt": "E",
"aa_end": null,
"aa_length": 1939,
"aa_ref": "E",
"aa_start": 1509,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 6050,
"cdna_start": 4708,
"cds_end": null,
"cds_length": 5820,
"cds_start": 4527,
"consequences": [
"splice_region_variant",
"synonymous_variant"
],
"exon_count": 39,
"exon_rank": 32,
"exon_rank_end": null,
"feature": "ENST00000968256.1",
"gene_hgnc_id": 7576,
"gene_symbol": "MYH6",
"hgvs_c": "c.4527G>A",
"hgvs_p": "p.Glu1509Glu",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000638315.1",
"strand": false,
"transcript": "ENST00000968256.1",
"transcript_support_level": null
},
{
"aa_alt": "E",
"aa_end": null,
"aa_length": 1939,
"aa_ref": "E",
"aa_start": 1509,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 6448,
"cdna_start": 4692,
"cds_end": null,
"cds_length": 5820,
"cds_start": 4527,
"consequences": [
"splice_region_variant",
"synonymous_variant"
],
"exon_count": 39,
"exon_rank": 32,
"exon_rank_end": null,
"feature": "ENST00000968259.1",
"gene_hgnc_id": 7576,
"gene_symbol": "MYH6",
"hgvs_c": "c.4527G>A",
"hgvs_p": "p.Glu1509Glu",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000638318.1",
"strand": false,
"transcript": "ENST00000968259.1",
"transcript_support_level": null
},
{
"aa_alt": "E",
"aa_end": null,
"aa_length": 1939,
"aa_ref": "E",
"aa_start": 1509,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 6975,
"cdna_start": 5239,
"cds_end": null,
"cds_length": 5820,
"cds_start": 4527,
"consequences": [
"splice_region_variant",
"synonymous_variant"
],
"exon_count": 38,
"exon_rank": 31,
"exon_rank_end": null,
"feature": "ENST00000968261.1",
"gene_hgnc_id": 7576,
"gene_symbol": "MYH6",
"hgvs_c": "c.4527G>A",
"hgvs_p": "p.Glu1509Glu",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000638320.1",
"strand": false,
"transcript": "ENST00000968261.1",
"transcript_support_level": null
},
{
"aa_alt": "E",
"aa_end": null,
"aa_length": 1939,
"aa_ref": "E",
"aa_start": 1509,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 5964,
"cdna_start": 4617,
"cds_end": null,
"cds_length": 5820,
"cds_start": 4527,
"consequences": [
"splice_region_variant",
"synonymous_variant"
],
"exon_count": 39,
"exon_rank": 32,
"exon_rank_end": null,
"feature": "ENST00000968281.1",
"gene_hgnc_id": 7576,
"gene_symbol": "MYH6",
"hgvs_c": "c.4527G>A",
"hgvs_p": "p.Glu1509Glu",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000638340.1",
"strand": false,
"transcript": "ENST00000968281.1",
"transcript_support_level": null
},
{
"aa_alt": "E",
"aa_end": null,
"aa_length": 1939,
"aa_ref": "E",
"aa_start": 1509,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 5998,
"cdna_start": 4649,
"cds_end": null,
"cds_length": 5820,
"cds_start": 4527,
"consequences": [
"splice_region_variant",
"synonymous_variant"
],
"exon_count": 38,
"exon_rank": 31,
"exon_rank_end": null,
"feature": "ENST00000968282.1",
"gene_hgnc_id": 7576,
"gene_symbol": "MYH6",
"hgvs_c": "c.4527G>A",
"hgvs_p": "p.Glu1509Glu",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000638341.1",
"strand": false,
"transcript": "ENST00000968282.1",
"transcript_support_level": null
},
{
"aa_alt": "E",
"aa_end": null,
"aa_length": 1939,
"aa_ref": "E",
"aa_start": 1509,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 5972,
"cdna_start": 4623,
"cds_end": null,
"cds_length": 5820,
"cds_start": 4527,
"consequences": [
"splice_region_variant",
"synonymous_variant"
],
"exon_count": 39,
"exon_rank": 32,
"exon_rank_end": null,
"feature": "ENST00000968283.1",
"gene_hgnc_id": 7576,
"gene_symbol": "MYH6",
"hgvs_c": "c.4527G>A",
"hgvs_p": "p.Glu1509Glu",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000638342.1",
"strand": false,
"transcript": "ENST00000968283.1",
"transcript_support_level": null
},
{
"aa_alt": "E",
"aa_end": null,
"aa_length": 1939,
"aa_ref": "E",
"aa_start": 1509,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 6002,
"cdna_start": 4659,
"cds_end": null,
"cds_length": 5820,
"cds_start": 4527,
"consequences": [
"splice_region_variant",
"synonymous_variant"
],
"exon_count": 39,
"exon_rank": 32,
"exon_rank_end": null,
"feature": "ENST00000968287.1",
"gene_hgnc_id": 7576,
"gene_symbol": "MYH6",
"hgvs_c": "c.4527G>A",
"hgvs_p": "p.Glu1509Glu",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000638346.1",
"strand": false,
"transcript": "ENST00000968287.1",
"transcript_support_level": null
},
{
"aa_alt": "E",
"aa_end": null,
"aa_length": 1939,
"aa_ref": "E",
"aa_start": 1509,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 6469,
"cdna_start": 4737,
"cds_end": null,
"cds_length": 5820,
"cds_start": 4527,
"consequences": [
"splice_region_variant",
"synonymous_variant"
],
"exon_count": 38,
"exon_rank": 31,
"exon_rank_end": null,
"feature": "ENST00000968288.1",
"gene_hgnc_id": 7576,
"gene_symbol": "MYH6",
"hgvs_c": "c.4527G>A",
"hgvs_p": "p.Glu1509Glu",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000638347.1",
"strand": false,
"transcript": "ENST00000968288.1",
"transcript_support_level": null
},
{
"aa_alt": "E",
"aa_end": null,
"aa_length": 1939,
"aa_ref": "E",
"aa_start": 1509,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 6352,
"cdna_start": 5001,
"cds_end": null,
"cds_length": 5820,
"cds_start": 4527,
"consequences": [
"splice_region_variant",
"synonymous_variant"
],
"exon_count": 37,
"exon_rank": 30,
"exon_rank_end": null,
"feature": "ENST00000968290.1",
"gene_hgnc_id": 7576,
"gene_symbol": "MYH6",
"hgvs_c": "c.4527G>A",
"hgvs_p": "p.Glu1509Glu",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000638349.1",
"strand": false,
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],
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}
]
}