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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 15-50105307-C-T (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=15&pos=50105307&ref=C&alt=T&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "15",
"pos": 50105307,
"ref": "C",
"alt": "T",
"effect": "intron_variant",
"transcript": "NM_024837.4",
"consequences": [
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 28,
"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "ATP8B4",
"gene_hgnc_id": 13536,
"hgvs_c": "c.28+1632G>A",
"hgvs_p": null,
"transcript": "NM_024837.4",
"protein_id": "NP_079113.2",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1192,
"cds_start": null,
"cds_end": null,
"cds_length": 3579,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "ENST00000284509.11",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_024837.4"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": true,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 28,
"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "ATP8B4",
"gene_hgnc_id": 13536,
"hgvs_c": "c.28+1632G>A",
"hgvs_p": null,
"transcript": "ENST00000284509.11",
"protein_id": "ENSP00000284509.6",
"transcript_support_level": 5,
"aa_start": null,
"aa_end": null,
"aa_length": 1192,
"cds_start": null,
"cds_end": null,
"cds_length": 3579,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "NM_024837.4",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000284509.11"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 27,
"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "ATP8B4",
"gene_hgnc_id": 13536,
"hgvs_c": "n.28+1632G>A",
"hgvs_p": null,
"transcript": "ENST00000557955.5",
"protein_id": "ENSP00000453690.1",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": null,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "nonsense_mediated_decay",
"feature": "ENST00000557955.5"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 28,
"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "ATP8B4",
"gene_hgnc_id": 13536,
"hgvs_c": "n.28+1632G>A",
"hgvs_p": null,
"transcript": "ENST00000558906.5",
"protein_id": "ENSP00000452956.1",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": null,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "nonsense_mediated_decay",
"feature": "ENST00000558906.5"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 29,
"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "ATP8B4",
"gene_hgnc_id": 13536,
"hgvs_c": "n.28+1632G>A",
"hgvs_p": null,
"transcript": "ENST00000559726.5",
"protein_id": "ENSP00000453229.1",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": null,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "nonsense_mediated_decay",
"feature": "ENST00000559726.5"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 28,
"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "ATP8B4",
"gene_hgnc_id": 13536,
"hgvs_c": "c.28+1632G>A",
"hgvs_p": null,
"transcript": "ENST00000559829.5",
"protein_id": "ENSP00000453169.1",
"transcript_support_level": 5,
"aa_start": null,
"aa_end": null,
"aa_length": 1192,
"cds_start": null,
"cds_end": null,
"cds_length": 3579,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000559829.5"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 29,
"intron_rank": 3,
"intron_rank_end": null,
"gene_symbol": "ATP8B4",
"gene_hgnc_id": 13536,
"hgvs_c": "c.28+1632G>A",
"hgvs_p": null,
"transcript": "ENST00000895127.1",
"protein_id": "ENSP00000565186.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1192,
"cds_start": null,
"cds_end": null,
"cds_length": 3579,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000895127.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 28,
"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "ATP8B4",
"gene_hgnc_id": 13536,
"hgvs_c": "c.28+1632G>A",
"hgvs_p": null,
"transcript": "ENST00000895129.1",
"protein_id": "ENSP00000565188.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1192,
"cds_start": null,
"cds_end": null,
"cds_length": 3579,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000895129.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 29,
"intron_rank": 3,
"intron_rank_end": null,
"gene_symbol": "ATP8B4",
"gene_hgnc_id": 13536,
"hgvs_c": "c.28+1632G>A",
"hgvs_p": null,
"transcript": "ENST00000895131.1",
"protein_id": "ENSP00000565190.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1192,
"cds_start": null,
"cds_end": null,
"cds_length": 3579,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000895131.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 28,
"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "ATP8B4",
"gene_hgnc_id": 13536,
"hgvs_c": "c.28+1632G>A",
"hgvs_p": null,
"transcript": "ENST00000895132.1",
"protein_id": "ENSP00000565191.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1192,
"cds_start": null,
"cds_end": null,
"cds_length": 3579,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000895132.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 29,
"intron_rank": 3,
"intron_rank_end": null,
"gene_symbol": "ATP8B4",
"gene_hgnc_id": 13536,
"hgvs_c": "c.28+1632G>A",
"hgvs_p": null,
"transcript": "ENST00000966552.1",
"protein_id": "ENSP00000636611.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1158,
"cds_start": null,
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"cds_length": 3477,
"cdna_start": null,
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"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000966552.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 28,
"intron_rank": 3,
"intron_rank_end": null,
"gene_symbol": "ATP8B4",
"gene_hgnc_id": 13536,
"hgvs_c": "c.28+1632G>A",
"hgvs_p": null,
"transcript": "ENST00000966553.1",
"protein_id": "ENSP00000636612.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1154,
"cds_start": null,
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"cds_length": 3465,
"cdna_start": null,
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"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000966553.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 27,
"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "ATP8B4",
"gene_hgnc_id": 13536,
"hgvs_c": "c.28+1632G>A",
"hgvs_p": null,
"transcript": "ENST00000895128.1",
"protein_id": "ENSP00000565187.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1129,
"cds_start": null,
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"cds_length": 3390,
"cdna_start": null,
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"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000895128.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
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],
"exon_rank": null,
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"exon_count": 27,
"intron_rank": 2,
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"gene_symbol": "ATP8B4",
"gene_hgnc_id": 13536,
"hgvs_c": "c.28+1632G>A",
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"transcript": "ENST00000895130.1",
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"cdna_start": null,
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"mane_select": null,
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"biotype": "protein_coding",
"feature": "ENST00000895130.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "ATP8B4",
"gene_hgnc_id": 13536,
"hgvs_c": "c.28+1632G>A",
"hgvs_p": null,
"transcript": "ENST00000674213.1",
"protein_id": "ENSP00000501334.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 345,
"cds_start": null,
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"cds_length": 1038,
"cdna_start": null,
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"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000674213.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 4,
"intron_rank": 2,
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"gene_symbol": "ATP8B4",
"gene_hgnc_id": 13536,
"hgvs_c": "c.28+1632G>A",
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"transcript": "ENST00000558829.1",
"protein_id": "ENSP00000453539.1",
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"cdna_start": null,
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"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000558829.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 30,
"intron_rank": 3,
"intron_rank_end": null,
"gene_symbol": "ATP8B4",
"gene_hgnc_id": 13536,
"hgvs_c": "c.139+1632G>A",
"hgvs_p": null,
"transcript": "XM_011522046.3",
"protein_id": "XP_011520348.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1257,
"cds_start": null,
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"cdna_start": null,
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"mane_select": null,
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"biotype": "protein_coding",
"feature": "XM_011522046.3"
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 29,
"intron_rank": 3,
"intron_rank_end": null,
"gene_symbol": "ATP8B4",
"gene_hgnc_id": 13536,
"hgvs_c": "c.139+1632G>A",
"hgvs_p": null,
"transcript": "XM_024450065.2",
"protein_id": "XP_024305833.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1229,
"cds_start": null,
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"cdna_start": null,
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"biotype": "protein_coding",
"feature": "XM_024450065.2"
},
{
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"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 29,
"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "ATP8B4",
"gene_hgnc_id": 13536,
"hgvs_c": "c.28+1632G>A",
"hgvs_p": null,
"transcript": "XM_011522047.3",
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"biotype": "protein_coding",
"feature": "XM_011522047.3"
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "ATP8B4",
"gene_hgnc_id": 13536,
"hgvs_c": "c.28+1632G>A",
"hgvs_p": null,
"transcript": "XM_011522048.2",
"protein_id": "XP_011520350.1",
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"feature": "XM_011522048.2"
},
{
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"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
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"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "ATP8B4",
"gene_hgnc_id": 13536,
"hgvs_c": "c.28+1632G>A",
"hgvs_p": null,
"transcript": "XM_011522049.3",
"protein_id": "XP_011520351.1",
"transcript_support_level": null,
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"cds_start": null,
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"cdna_start": null,
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"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "XM_011522049.3"
},
{
"aa_ref": null,
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 29,
"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "ATP8B4",
"gene_hgnc_id": 13536,
"hgvs_c": "c.28+1632G>A",
"hgvs_p": null,
"transcript": "XM_011522052.4",
"protein_id": "XP_011520354.1",
"transcript_support_level": null,
"aa_start": null,
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"cds_start": null,
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"cdna_start": null,
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"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "XM_011522052.4"
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
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}