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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 16-50316972-T-G (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=16&pos=50316972&ref=T&alt=G&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "16",
"pos": 50316972,
"ref": "T",
"alt": "G",
"effect": "3_prime_UTR_variant",
"transcript": "ENST00000394688.8",
"consequences": [
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 26,
"exon_rank_end": null,
"exon_count": 26,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "ADCY7",
"gene_hgnc_id": 238,
"hgvs_c": "c.*1467T>G",
"hgvs_p": null,
"transcript": "NM_001114.5",
"protein_id": "NP_001105.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1080,
"cds_start": -4,
"cds_end": null,
"cds_length": 3243,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 6271,
"mane_select": "ENST00000673801.1",
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": true,
"protein_coding": true,
"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 26,
"exon_rank_end": null,
"exon_count": 26,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "ADCY7",
"gene_hgnc_id": 238,
"hgvs_c": "c.*1467T>G",
"hgvs_p": null,
"transcript": "ENST00000673801.1",
"protein_id": "ENSP00000501053.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1080,
"cds_start": -4,
"cds_end": null,
"cds_length": 3243,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 6271,
"mane_select": "NM_001114.5",
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 17,
"exon_rank_end": null,
"exon_count": 17,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "BRD7",
"gene_hgnc_id": 14310,
"hgvs_c": "c.*2239A>C",
"hgvs_p": null,
"transcript": "NM_013263.5",
"protein_id": "NP_037395.2",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 651,
"cds_start": -4,
"cds_end": null,
"cds_length": 1956,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 5424,
"mane_select": "ENST00000394688.8",
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": true,
"protein_coding": true,
"strand": false,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 17,
"exon_rank_end": null,
"exon_count": 17,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "BRD7",
"gene_hgnc_id": 14310,
"hgvs_c": "c.*2239A>C",
"hgvs_p": null,
"transcript": "ENST00000394688.8",
"protein_id": "ENSP00000378180.3",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 651,
"cds_start": -4,
"cds_end": null,
"cds_length": 1956,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 5424,
"mane_select": "NM_013263.5",
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 25,
"exon_rank_end": null,
"exon_count": 25,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "ADCY7",
"gene_hgnc_id": 238,
"hgvs_c": "c.*1467T>G",
"hgvs_p": null,
"transcript": "ENST00000254235.7",
"protein_id": "ENSP00000254235.3",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 1080,
"cds_start": -4,
"cds_end": null,
"cds_length": 3243,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 6138,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": true,
"consequences": [
"non_coding_transcript_exon_variant"
],
"exon_rank": 26,
"exon_rank_end": null,
"exon_count": 26,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "ADCY7",
"gene_hgnc_id": 238,
"hgvs_c": "n.*3082T>G",
"hgvs_p": null,
"transcript": "ENST00000673973.1",
"protein_id": "ENSP00000501223.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": -4,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 5916,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 26,
"exon_rank_end": null,
"exon_count": 26,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "ADCY7",
"gene_hgnc_id": 238,
"hgvs_c": "c.*1467T>G",
"hgvs_p": null,
"transcript": "ENST00000394697.7",
"protein_id": "ENSP00000378187.2",
"transcript_support_level": 5,
"aa_start": null,
"aa_end": null,
"aa_length": 1080,
"cds_start": -4,
"cds_end": null,
"cds_length": 3243,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 6178,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 17,
"exon_rank_end": null,
"exon_count": 17,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "BRD7",
"gene_hgnc_id": 14310,
"hgvs_c": "c.*2239A>C",
"hgvs_p": null,
"transcript": "ENST00000710357.1",
"protein_id": "ENSP00000518228.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 692,
"cds_start": -4,
"cds_end": null,
"cds_length": 2079,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 5424,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 17,
"exon_rank_end": null,
"exon_count": 17,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "BRD7",
"gene_hgnc_id": 14310,
"hgvs_c": "c.*2239A>C",
"hgvs_p": null,
"transcript": "NM_001438173.1",
"protein_id": "NP_001425102.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 669,
"cds_start": -4,
"cds_end": null,
"cds_length": 2010,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 5361,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 17,
"exon_rank_end": null,
"exon_count": 17,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "BRD7",
"gene_hgnc_id": 14310,
"hgvs_c": "c.*2239A>C",
"hgvs_p": null,
"transcript": "NM_001437990.1",
"protein_id": "NP_001424919.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 668,
"cds_start": -4,
"cds_end": null,
"cds_length": 2007,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 5358,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 17,
"exon_rank_end": null,
"exon_count": 17,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "BRD7",
"gene_hgnc_id": 14310,
"hgvs_c": "c.*2239A>C",
"hgvs_p": null,
"transcript": "ENST00000710356.1",
"protein_id": "ENSP00000518227.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 668,
"cds_start": -4,
"cds_end": null,
"cds_length": 2007,
"cdna_start": null,
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"cdna_length": 5475,
"mane_select": null,
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"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 17,
"exon_rank_end": null,
"exon_count": 17,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "BRD7",
"gene_hgnc_id": 14310,
"hgvs_c": "c.*2239A>C",
"hgvs_p": null,
"transcript": "NM_001173984.4",
"protein_id": "NP_001167455.1",
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"aa_start": null,
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"aa_length": 652,
"cds_start": -4,
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"cds_length": 1959,
"cdna_start": null,
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"mane_select": null,
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"biotype": null,
"feature": null
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 16,
"exon_rank_end": null,
"exon_count": 16,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "BRD7",
"gene_hgnc_id": 14310,
"hgvs_c": "c.*2239A>C",
"hgvs_p": null,
"transcript": "NM_001438174.1",
"protein_id": "NP_001425103.1",
"transcript_support_level": null,
"aa_start": null,
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"aa_length": 616,
"cds_start": -4,
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"cdna_start": null,
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"mane_select": null,
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"biotype": null,
"feature": null
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 16,
"exon_rank_end": null,
"exon_count": 16,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "BRD7",
"gene_hgnc_id": 14310,
"hgvs_c": "c.*2239A>C",
"hgvs_p": null,
"transcript": "NM_001438175.1",
"protein_id": "NP_001425104.1",
"transcript_support_level": null,
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"feature": null
},
{
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"protein_coding": false,
"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 26,
"exon_rank_end": null,
"exon_count": 26,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "ADCY7",
"gene_hgnc_id": 238,
"hgvs_c": "n.*3082T>G",
"hgvs_p": null,
"transcript": "ENST00000673973.1",
"protein_id": "ENSP00000501223.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": -4,
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"cdna_start": null,
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"mane_select": null,
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"biotype": null,
"feature": null
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 26,
"exon_rank_end": null,
"exon_count": 26,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "ADCY7",
"gene_hgnc_id": 238,
"hgvs_c": "c.*1467T>G",
"hgvs_p": null,
"transcript": "XM_011522835.3",
"protein_id": "XP_011521137.1",
"transcript_support_level": null,
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},
{
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"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 26,
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"exon_count": 26,
"intron_rank": null,
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"gene_symbol": "ADCY7",
"gene_hgnc_id": 238,
"hgvs_c": "c.*1467T>G",
"hgvs_p": null,
"transcript": "XM_011522836.3",
"protein_id": "XP_011521138.1",
"transcript_support_level": null,
"aa_start": null,
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"cdna_start": null,
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"mane_select": null,
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"biotype": null,
"feature": null
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 26,
"exon_rank_end": null,
"exon_count": 26,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "ADCY7",
"gene_hgnc_id": 238,
"hgvs_c": "c.*1467T>G",
"hgvs_p": null,
"transcript": "XM_011522837.4",
"protein_id": "XP_011521139.1",
"transcript_support_level": null,
"aa_start": null,
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"aa_length": 1086,
"cds_start": -4,
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"cdna_start": null,
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"mane_select": null,
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"biotype": null,
"feature": null
},
{
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"protein_coding": true,
"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 26,
"exon_rank_end": null,
"exon_count": 26,
"intron_rank": null,
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"gene_symbol": "ADCY7",
"gene_hgnc_id": 238,
"hgvs_c": "c.*1467T>G",
"hgvs_p": null,
"transcript": "XM_011522838.3",
"protein_id": "XP_011521140.1",
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},
{
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],
"exon_rank": 26,
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"exon_count": 26,
"intron_rank": null,
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"gene_symbol": "ADCY7",
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"hgvs_c": "c.*1467T>G",
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"transcript": "XM_011522839.3",
"protein_id": "XP_011521141.1",
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},
{
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"protein_coding": true,
"strand": true,
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"3_prime_UTR_variant"
],
"exon_rank": 26,
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"exon_count": 26,
"intron_rank": null,
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"gene_symbol": "ADCY7",
"gene_hgnc_id": 238,
"hgvs_c": "c.*1467T>G",
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"transcript": "XM_011522840.4",
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"feature": null
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 26,
"exon_rank_end": null,
"exon_count": 26,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "ADCY7",
"gene_hgnc_id": 238,
"hgvs_c": "c.*1467T>G",
"hgvs_p": null,
"transcript": "XM_011522842.3",
"protein_id": "XP_011521144.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1086,
"cds_start": -4,
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"cdna_start": null,
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"cdna_length": 6319,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 26,
"exon_rank_end": null,
"exon_count": 26,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "ADCY7",
"gene_hgnc_id": 238,
"hgvs_c": "c.*1467T>G",
"hgvs_p": null,
"transcript": "XM_047433550.1",
"protein_id": "XP_047289506.1",
"transcript_support_level": null,
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"cdna_start": null,
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}
],
"message": null
}