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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 17-8594767-C-A (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=17&pos=8594767&ref=C&alt=A&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "17",
"pos": 8594767,
"ref": "C",
"alt": "A",
"effect": "intron_variant",
"transcript": "NM_001256012.3",
"consequences": [
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 43,
"intron_rank": 3,
"intron_rank_end": null,
"gene_symbol": "MYH10",
"gene_hgnc_id": 7568,
"hgvs_c": "c.503-5659G>T",
"hgvs_p": null,
"transcript": "NM_001256012.3",
"protein_id": "NP_001242941.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 2007,
"cds_start": null,
"cds_end": null,
"cds_length": 6024,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "ENST00000360416.8",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001256012.3"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": true,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 43,
"intron_rank": 3,
"intron_rank_end": null,
"gene_symbol": "MYH10",
"gene_hgnc_id": 7568,
"hgvs_c": "c.503-5659G>T",
"hgvs_p": null,
"transcript": "ENST00000360416.8",
"protein_id": "ENSP00000353590.4",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 2007,
"cds_start": null,
"cds_end": null,
"cds_length": 6024,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "NM_001256012.3",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000360416.8"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 42,
"intron_rank": 3,
"intron_rank_end": null,
"gene_symbol": "MYH10",
"gene_hgnc_id": 7568,
"hgvs_c": "c.503-5659G>T",
"hgvs_p": null,
"transcript": "ENST00000379980.8",
"protein_id": "ENSP00000369315.5",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 1985,
"cds_start": null,
"cds_end": null,
"cds_length": 5958,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000379980.8"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 41,
"intron_rank": 3,
"intron_rank_end": null,
"gene_symbol": "MYH10",
"gene_hgnc_id": 7568,
"hgvs_c": "c.503-5659G>T",
"hgvs_p": null,
"transcript": "ENST00000269243.8",
"protein_id": "ENSP00000269243.4",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 1976,
"cds_start": null,
"cds_end": null,
"cds_length": 5931,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000269243.8"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 44,
"intron_rank": 4,
"intron_rank_end": null,
"gene_symbol": "MYH10",
"gene_hgnc_id": 7568,
"hgvs_c": "c.503-5659G>T",
"hgvs_p": null,
"transcript": "ENST00000686654.1",
"protein_id": "ENSP00000508862.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 2007,
"cds_start": null,
"cds_end": null,
"cds_length": 6024,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000686654.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 43,
"intron_rank": 3,
"intron_rank_end": null,
"gene_symbol": "MYH10",
"gene_hgnc_id": 7568,
"hgvs_c": "c.503-5659G>T",
"hgvs_p": null,
"transcript": "ENST00000688902.1",
"protein_id": "ENSP00000509091.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 2007,
"cds_start": null,
"cds_end": null,
"cds_length": 6024,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000688902.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 44,
"intron_rank": 4,
"intron_rank_end": null,
"gene_symbol": "MYH10",
"gene_hgnc_id": 7568,
"hgvs_c": "c.503-5659G>T",
"hgvs_p": null,
"transcript": "ENST00000693441.1",
"protein_id": "ENSP00000509241.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 2007,
"cds_start": null,
"cds_end": null,
"cds_length": 6024,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000693441.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 43,
"intron_rank": 3,
"intron_rank_end": null,
"gene_symbol": "MYH10",
"gene_hgnc_id": 7568,
"hgvs_c": "c.503-5659G>T",
"hgvs_p": null,
"transcript": "ENST00000916047.1",
"protein_id": "ENSP00000586106.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1992,
"cds_start": null,
"cds_end": null,
"cds_length": 5979,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000916047.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 43,
"intron_rank": 3,
"intron_rank_end": null,
"gene_symbol": "MYH10",
"gene_hgnc_id": 7568,
"hgvs_c": "c.503-5659G>T",
"hgvs_p": null,
"transcript": "ENST00000916051.1",
"protein_id": "ENSP00000586110.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1992,
"cds_start": null,
"cds_end": null,
"cds_length": 5979,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000916051.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 44,
"intron_rank": 4,
"intron_rank_end": null,
"gene_symbol": "MYH10",
"gene_hgnc_id": 7568,
"hgvs_c": "c.503-5659G>T",
"hgvs_p": null,
"transcript": "ENST00000916057.1",
"protein_id": "ENSP00000586116.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1992,
"cds_start": null,
"cds_end": null,
"cds_length": 5979,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000916057.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 42,
"intron_rank": 3,
"intron_rank_end": null,
"gene_symbol": "MYH10",
"gene_hgnc_id": 7568,
"hgvs_c": "c.503-5659G>T",
"hgvs_p": null,
"transcript": "NM_001375266.1",
"protein_id": "NP_001362195.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1986,
"cds_start": null,
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"cdna_start": null,
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"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001375266.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 42,
"intron_rank": 3,
"intron_rank_end": null,
"gene_symbol": "MYH10",
"gene_hgnc_id": 7568,
"hgvs_c": "c.503-5659G>T",
"hgvs_p": null,
"transcript": "ENST00000684843.1",
"protein_id": "ENSP00000509695.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1986,
"cds_start": null,
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"cdna_start": null,
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"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000684843.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 43,
"intron_rank": 4,
"intron_rank_end": null,
"gene_symbol": "MYH10",
"gene_hgnc_id": 7568,
"hgvs_c": "c.503-5659G>T",
"hgvs_p": null,
"transcript": "ENST00000692526.1",
"protein_id": "ENSP00000510471.1",
"transcript_support_level": null,
"aa_start": null,
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"aa_length": 1986,
"cds_start": null,
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"cdna_start": null,
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"mane_select": null,
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"biotype": "protein_coding",
"feature": "ENST00000692526.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
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],
"exon_rank": null,
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"exon_count": 42,
"intron_rank": 3,
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"gene_symbol": "MYH10",
"gene_hgnc_id": 7568,
"hgvs_c": "c.503-5659G>T",
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"transcript": "ENST00000916052.1",
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"biotype": "protein_coding",
"feature": "ENST00000916052.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 42,
"intron_rank": 3,
"intron_rank_end": null,
"gene_symbol": "MYH10",
"gene_hgnc_id": 7568,
"hgvs_c": "c.503-5659G>T",
"hgvs_p": null,
"transcript": "ENST00000916056.1",
"protein_id": "ENSP00000586115.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1986,
"cds_start": null,
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"cdna_start": null,
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"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000916056.1"
},
{
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"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 42,
"intron_rank": 3,
"intron_rank_end": null,
"gene_symbol": "MYH10",
"gene_hgnc_id": 7568,
"hgvs_c": "c.503-5659G>T",
"hgvs_p": null,
"transcript": "ENST00000955183.1",
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"biotype": "protein_coding",
"feature": "ENST00000955183.1"
},
{
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"protein_coding": true,
"strand": false,
"consequences": [
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],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 42,
"intron_rank": 3,
"intron_rank_end": null,
"gene_symbol": "MYH10",
"gene_hgnc_id": 7568,
"hgvs_c": "c.503-5659G>T",
"hgvs_p": null,
"transcript": "NM_001256095.2",
"protein_id": "NP_001243024.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
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"cdna_start": null,
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"biotype": "protein_coding",
"feature": "NM_001256095.2"
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
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],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 43,
"intron_rank": 4,
"intron_rank_end": null,
"gene_symbol": "MYH10",
"gene_hgnc_id": 7568,
"hgvs_c": "c.503-5659G>T",
"hgvs_p": null,
"transcript": "ENST00000687178.1",
"protein_id": "ENSP00000509748.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1985,
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},
{
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"protein_coding": true,
"strand": false,
"consequences": [
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],
"exon_rank": null,
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"intron_rank": 3,
"intron_rank_end": null,
"gene_symbol": "MYH10",
"gene_hgnc_id": 7568,
"hgvs_c": "c.503-5659G>T",
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"transcript": "ENST00000916048.1",
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},
{
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"protein_coding": true,
"strand": false,
"consequences": [
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],
"exon_rank": null,
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"exon_count": 41,
"intron_rank": 3,
"intron_rank_end": null,
"gene_symbol": "MYH10",
"gene_hgnc_id": 7568,
"hgvs_c": "c.503-5659G>T",
"hgvs_p": null,
"transcript": "NM_005964.5",
"protein_id": "NP_005955.3",
"transcript_support_level": null,
"aa_start": null,
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"feature": "NM_005964.5"
},
{
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"protein_coding": true,
"strand": false,
"consequences": [
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],
"exon_rank": null,
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"exon_count": 42,
"intron_rank": 4,
"intron_rank_end": null,
"gene_symbol": "MYH10",
"gene_hgnc_id": 7568,
"hgvs_c": "c.503-5659G>T",
"hgvs_p": null,
"transcript": "ENST00000916044.1",
"protein_id": "ENSP00000586103.1",
"transcript_support_level": null,
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"aa_end": null,
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"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000916044.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 41,
"intron_rank": 3,
"intron_rank_end": null,
"gene_symbol": "MYH10",
"gene_hgnc_id": 7568,
"hgvs_c": "c.503-5659G>T",
"hgvs_p": null,
"transcript": "ENST00000916045.1",
"protein_id": "ENSP00000586104.1",
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"aa_start": null,
"aa_end": null,
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"cdna_start": null,
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"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000916045.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 42,
"intron_rank": 4,
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}
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}