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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 19-10679486-T-C (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=19&pos=10679486&ref=T&alt=C&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "19",
"pos": 10679486,
"ref": "T",
"alt": "C",
"effect": "intron_variant",
"transcript": "NM_017620.3",
"consequences": [
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 20,
"intron_rank": 7,
"intron_rank_end": null,
"gene_symbol": "ILF3",
"gene_hgnc_id": 6038,
"hgvs_c": "c.747+294T>C",
"hgvs_p": null,
"transcript": "NM_017620.3",
"protein_id": "NP_060090.2",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 898,
"cds_start": null,
"cds_end": null,
"cds_length": 2697,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 6017,
"mane_select": "ENST00000588657.6",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_017620.3"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": true,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 20,
"intron_rank": 7,
"intron_rank_end": null,
"gene_symbol": "ILF3",
"gene_hgnc_id": 6038,
"hgvs_c": "c.747+294T>C",
"hgvs_p": null,
"transcript": "ENST00000588657.6",
"protein_id": "ENSP00000468181.1",
"transcript_support_level": 5,
"aa_start": null,
"aa_end": null,
"aa_length": 898,
"cds_start": null,
"cds_end": null,
"cds_length": 2697,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 6017,
"mane_select": "NM_017620.3",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000588657.6"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 18,
"intron_rank": 7,
"intron_rank_end": null,
"gene_symbol": "ILF3",
"gene_hgnc_id": 6038,
"hgvs_c": "c.747+294T>C",
"hgvs_p": null,
"transcript": "ENST00000407004.8",
"protein_id": "ENSP00000384660.2",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 706,
"cds_start": null,
"cds_end": null,
"cds_length": 2121,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 3653,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000407004.8"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 17,
"intron_rank": 6,
"intron_rank_end": null,
"gene_symbol": "ILF3",
"gene_hgnc_id": 6038,
"hgvs_c": "c.747+294T>C",
"hgvs_p": null,
"transcript": "ENST00000250241.12",
"protein_id": "ENSP00000250241.8",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 690,
"cds_start": null,
"cds_end": null,
"cds_length": 2073,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 3035,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000250241.12"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 20,
"intron_rank": 7,
"intron_rank_end": null,
"gene_symbol": "ILF3",
"gene_hgnc_id": 6038,
"hgvs_c": "c.747+294T>C",
"hgvs_p": null,
"transcript": "ENST00000938416.1",
"protein_id": "ENSP00000608475.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 902,
"cds_start": null,
"cds_end": null,
"cds_length": 2709,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 3468,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000938416.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 21,
"intron_rank": 8,
"intron_rank_end": null,
"gene_symbol": "ILF3",
"gene_hgnc_id": 6038,
"hgvs_c": "c.747+294T>C",
"hgvs_p": null,
"transcript": "NM_001394808.1",
"protein_id": "NP_001381737.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 898,
"cds_start": null,
"cds_end": null,
"cds_length": 2697,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 6175,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001394808.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 20,
"intron_rank": 7,
"intron_rank_end": null,
"gene_symbol": "ILF3",
"gene_hgnc_id": 6038,
"hgvs_c": "c.747+294T>C",
"hgvs_p": null,
"transcript": "NM_001394809.1",
"protein_id": "NP_001381738.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 898,
"cds_start": null,
"cds_end": null,
"cds_length": 2697,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 5958,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001394809.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 20,
"intron_rank": 7,
"intron_rank_end": null,
"gene_symbol": "ILF3",
"gene_hgnc_id": 6038,
"hgvs_c": "c.747+294T>C",
"hgvs_p": null,
"transcript": "NM_001394810.1",
"protein_id": "NP_001381739.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 898,
"cds_start": null,
"cds_end": null,
"cds_length": 2697,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 5982,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001394810.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 20,
"intron_rank": 7,
"intron_rank_end": null,
"gene_symbol": "ILF3",
"gene_hgnc_id": 6038,
"hgvs_c": "c.747+294T>C",
"hgvs_p": null,
"transcript": "ENST00000938418.1",
"protein_id": "ENSP00000608477.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 898,
"cds_start": null,
"cds_end": null,
"cds_length": 2697,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 3400,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000938418.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 20,
"intron_rank": 7,
"intron_rank_end": null,
"gene_symbol": "ILF3",
"gene_hgnc_id": 6038,
"hgvs_c": "c.747+294T>C",
"hgvs_p": null,
"transcript": "ENST00000938419.1",
"protein_id": "ENSP00000608478.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 898,
"cds_start": null,
"cds_end": null,
"cds_length": 2697,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 3355,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000938419.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 21,
"intron_rank": 8,
"intron_rank_end": null,
"gene_symbol": "ILF3",
"gene_hgnc_id": 6038,
"hgvs_c": "c.747+294T>C",
"hgvs_p": null,
"transcript": "ENST00000938420.1",
"protein_id": "ENSP00000608479.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 898,
"cds_start": null,
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"cds_length": 2697,
"cdna_start": null,
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"cdna_length": 3353,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000938420.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 21,
"intron_rank": 8,
"intron_rank_end": null,
"gene_symbol": "ILF3",
"gene_hgnc_id": 6038,
"hgvs_c": "c.747+294T>C",
"hgvs_p": null,
"transcript": "ENST00000970392.1",
"protein_id": "ENSP00000640451.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 898,
"cds_start": null,
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"cds_length": 2697,
"cdna_start": null,
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"cdna_length": 3522,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000970392.1"
},
{
"aa_ref": null,
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 21,
"intron_rank": 8,
"intron_rank_end": null,
"gene_symbol": "ILF3",
"gene_hgnc_id": 6038,
"hgvs_c": "c.747+294T>C",
"hgvs_p": null,
"transcript": "NM_001394811.1",
"protein_id": "NP_001381740.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 894,
"cds_start": null,
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"cds_length": 2685,
"cdna_start": null,
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"cdna_length": 6163,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001394811.1"
},
{
"aa_ref": null,
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 20,
"intron_rank": 7,
"intron_rank_end": null,
"gene_symbol": "ILF3",
"gene_hgnc_id": 6038,
"hgvs_c": "c.747+294T>C",
"hgvs_p": null,
"transcript": "NM_001394812.1",
"protein_id": "NP_001381741.1",
"transcript_support_level": null,
"aa_start": null,
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"cds_start": null,
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"cdna_start": null,
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"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001394812.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 20,
"intron_rank": 7,
"intron_rank_end": null,
"gene_symbol": "ILF3",
"gene_hgnc_id": 6038,
"hgvs_c": "c.747+294T>C",
"hgvs_p": null,
"transcript": "NM_012218.4",
"protein_id": "NP_036350.2",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 894,
"cds_start": null,
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"cdna_start": null,
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"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_012218.4"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 19,
"intron_rank": 6,
"intron_rank_end": null,
"gene_symbol": "ILF3",
"gene_hgnc_id": 6038,
"hgvs_c": "c.747+294T>C",
"hgvs_p": null,
"transcript": "ENST00000590261.5",
"protein_id": "ENSP00000468156.1",
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"aa_start": null,
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"cdna_start": null,
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"mane_select": null,
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"biotype": "protein_coding",
"feature": "ENST00000590261.5"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 20,
"intron_rank": 7,
"intron_rank_end": null,
"gene_symbol": "ILF3",
"gene_hgnc_id": 6038,
"hgvs_c": "c.747+294T>C",
"hgvs_p": null,
"transcript": "ENST00000899691.1",
"protein_id": "ENSP00000569750.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
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"cds_start": null,
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"cdna_start": null,
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"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000899691.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 19,
"intron_rank": 7,
"intron_rank_end": null,
"gene_symbol": "ILF3",
"gene_hgnc_id": 6038,
"hgvs_c": "c.747+294T>C",
"hgvs_p": null,
"transcript": "NM_001394813.1",
"protein_id": "NP_001381742.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 855,
"cds_start": null,
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"cdna_start": null,
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"mane_select": null,
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"biotype": "protein_coding",
"feature": "NM_001394813.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 19,
"intron_rank": 7,
"intron_rank_end": null,
"gene_symbol": "ILF3",
"gene_hgnc_id": 6038,
"hgvs_c": "c.747+294T>C",
"hgvs_p": null,
"transcript": "ENST00000938415.1",
"protein_id": "ENSP00000608474.1",
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"biotype": "protein_coding",
"feature": "ENST00000938415.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 20,
"intron_rank": 8,
"intron_rank_end": null,
"gene_symbol": "ILF3",
"gene_hgnc_id": 6038,
"hgvs_c": "c.747+294T>C",
"hgvs_p": null,
"transcript": "ENST00000938417.1",
"protein_id": "ENSP00000608476.1",
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"feature": "ENST00000938417.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 19,
"intron_rank": 7,
"intron_rank_end": null,
"gene_symbol": "ILF3",
"gene_hgnc_id": 6038,
"hgvs_c": "c.747+294T>C",
"hgvs_p": null,
"transcript": "NM_001394814.1",
"protein_id": "NP_001381743.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 851,
"cds_start": null,
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"cdna_start": null,
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"cdna_length": 5876,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001394814.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 19,
"intron_rank": 7,
"intron_rank_end": null,
"gene_symbol": "ILF3",
"gene_hgnc_id": 6038,
"hgvs_c": "c.747+294T>C",
"hgvs_p": null,
"transcript": "ENST00000899692.1",
"protein_id": "ENSP00000569751.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 851,
"cds_start": null,
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"cdna_start": null,
"cdna_end": null,
"cdna_length": 5938,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000899692.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
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}