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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 2-178379833-C-A (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=2&pos=178379833&ref=C&alt=A&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "2",
"pos": 178379833,
"ref": "C",
"alt": "A",
"effect": "intron_variant",
"transcript": "NM_001201480.2",
"consequences": [
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 25,
"intron_rank": 15,
"intron_rank_end": null,
"gene_symbol": "OSBPL6",
"gene_hgnc_id": 16388,
"hgvs_c": "c.1534-2587C>A",
"hgvs_p": null,
"transcript": "NM_032523.4",
"protein_id": "NP_115912.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 934,
"cds_start": null,
"cds_end": null,
"cds_length": 2805,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "ENST00000190611.9",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_032523.4"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": true,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 25,
"intron_rank": 15,
"intron_rank_end": null,
"gene_symbol": "OSBPL6",
"gene_hgnc_id": 16388,
"hgvs_c": "c.1534-2587C>A",
"hgvs_p": null,
"transcript": "ENST00000190611.9",
"protein_id": "ENSP00000190611.4",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 934,
"cds_start": null,
"cds_end": null,
"cds_length": 2805,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "NM_032523.4",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000190611.9"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 26,
"intron_rank": 16,
"intron_rank_end": null,
"gene_symbol": "OSBPL6",
"gene_hgnc_id": 16388,
"hgvs_c": "c.1609-2587C>A",
"hgvs_p": null,
"transcript": "ENST00000392505.6",
"protein_id": "ENSP00000376293.2",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 959,
"cds_start": null,
"cds_end": null,
"cds_length": 2880,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000392505.6"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 23,
"intron_rank": 13,
"intron_rank_end": null,
"gene_symbol": "OSBPL6",
"gene_hgnc_id": 16388,
"hgvs_c": "c.1426-2587C>A",
"hgvs_p": null,
"transcript": "ENST00000409631.5",
"protein_id": "ENSP00000386885.1",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 898,
"cds_start": null,
"cds_end": null,
"cds_length": 2697,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000409631.5"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": 13,
"intron_rank_end": null,
"gene_symbol": "OSBPL6",
"gene_hgnc_id": 16388,
"hgvs_c": "c.1333-2587C>A",
"hgvs_p": null,
"transcript": "ENST00000357080.8",
"protein_id": "ENSP00000349591.4",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 508,
"cds_start": null,
"cds_end": null,
"cds_length": 1527,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000357080.8"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 26,
"intron_rank": 16,
"intron_rank_end": null,
"gene_symbol": "OSBPL6",
"gene_hgnc_id": 16388,
"hgvs_c": "c.1609-2587C>A",
"hgvs_p": null,
"transcript": "NM_001201480.2",
"protein_id": "NP_001188409.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 959,
"cds_start": null,
"cds_end": null,
"cds_length": 2880,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001201480.2"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 26,
"intron_rank": 16,
"intron_rank_end": null,
"gene_symbol": "OSBPL6",
"gene_hgnc_id": 16388,
"hgvs_c": "c.1609-2587C>A",
"hgvs_p": null,
"transcript": "ENST00000881566.1",
"protein_id": "ENSP00000551625.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 959,
"cds_start": null,
"cds_end": null,
"cds_length": 2880,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000881566.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 25,
"intron_rank": 15,
"intron_rank_end": null,
"gene_symbol": "OSBPL6",
"gene_hgnc_id": 16388,
"hgvs_c": "c.1555-2587C>A",
"hgvs_p": null,
"transcript": "ENST00000932936.1",
"protein_id": "ENSP00000602995.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 941,
"cds_start": null,
"cds_end": null,
"cds_length": 2826,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000932936.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 24,
"intron_rank": 14,
"intron_rank_end": null,
"gene_symbol": "OSBPL6",
"gene_hgnc_id": 16388,
"hgvs_c": "c.1546-2587C>A",
"hgvs_p": null,
"transcript": "NM_145739.3",
"protein_id": "NP_665682.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 938,
"cds_start": null,
"cds_end": null,
"cds_length": 2817,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_145739.3"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 24,
"intron_rank": 14,
"intron_rank_end": null,
"gene_symbol": "OSBPL6",
"gene_hgnc_id": 16388,
"hgvs_c": "c.1546-2587C>A",
"hgvs_p": null,
"transcript": "ENST00000315022.2",
"protein_id": "ENSP00000318723.2",
"transcript_support_level": 2,
"aa_start": null,
"aa_end": null,
"aa_length": 938,
"cds_start": null,
"cds_end": null,
"cds_length": 2817,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000315022.2"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 26,
"intron_rank": 16,
"intron_rank_end": null,
"gene_symbol": "OSBPL6",
"gene_hgnc_id": 16388,
"hgvs_c": "c.1534-2587C>A",
"hgvs_p": null,
"transcript": "ENST00000881569.1",
"protein_id": "ENSP00000551628.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 934,
"cds_start": null,
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"cds_length": 2805,
"cdna_start": null,
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"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000881569.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 25,
"intron_rank": 15,
"intron_rank_end": null,
"gene_symbol": "OSBPL6",
"gene_hgnc_id": 16388,
"hgvs_c": "c.1534-2587C>A",
"hgvs_p": null,
"transcript": "ENST00000881571.1",
"protein_id": "ENSP00000551630.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 934,
"cds_start": null,
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"cdna_start": null,
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"mane_select": null,
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"biotype": "protein_coding",
"feature": "ENST00000881571.1"
},
{
"aa_ref": null,
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 26,
"intron_rank": 16,
"intron_rank_end": null,
"gene_symbol": "OSBPL6",
"gene_hgnc_id": 16388,
"hgvs_c": "c.1534-2587C>A",
"hgvs_p": null,
"transcript": "ENST00000881572.1",
"protein_id": "ENSP00000551631.1",
"transcript_support_level": null,
"aa_start": null,
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"aa_length": 934,
"cds_start": null,
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"cdna_start": null,
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"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000881572.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 25,
"intron_rank": 15,
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"gene_symbol": "OSBPL6",
"gene_hgnc_id": 16388,
"hgvs_c": "c.1534-2587C>A",
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"transcript": "ENST00000881587.1",
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"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000881587.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 26,
"intron_rank": 16,
"intron_rank_end": null,
"gene_symbol": "OSBPL6",
"gene_hgnc_id": 16388,
"hgvs_c": "c.1534-2587C>A",
"hgvs_p": null,
"transcript": "ENST00000932931.1",
"protein_id": "ENSP00000602990.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
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"cds_start": null,
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"cdna_start": null,
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"mane_select": null,
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"biotype": "protein_coding",
"feature": "ENST00000932931.1"
},
{
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"protein_coding": true,
"strand": true,
"consequences": [
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],
"exon_rank": null,
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"exon_count": 25,
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"gene_symbol": "OSBPL6",
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"hgvs_c": "c.1534-2587C>A",
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"transcript": "ENST00000932937.1",
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"biotype": "protein_coding",
"feature": "ENST00000932937.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 26,
"intron_rank": 16,
"intron_rank_end": null,
"gene_symbol": "OSBPL6",
"gene_hgnc_id": 16388,
"hgvs_c": "c.1534-2587C>A",
"hgvs_p": null,
"transcript": "ENST00000946027.1",
"protein_id": "ENSP00000616086.1",
"transcript_support_level": null,
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"cdna_start": null,
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"mane_select": null,
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"biotype": "protein_coding",
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},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
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],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 25,
"intron_rank": 15,
"intron_rank_end": null,
"gene_symbol": "OSBPL6",
"gene_hgnc_id": 16388,
"hgvs_c": "c.1516-2587C>A",
"hgvs_p": null,
"transcript": "ENST00000881579.1",
"protein_id": "ENSP00000551638.1",
"transcript_support_level": null,
"aa_start": null,
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"cds_start": null,
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"mane_select": null,
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"biotype": "protein_coding",
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},
{
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"strand": true,
"consequences": [
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],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 25,
"intron_rank": 15,
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"gene_symbol": "OSBPL6",
"gene_hgnc_id": 16388,
"hgvs_c": "c.1516-2587C>A",
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"transcript": "ENST00000881581.1",
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},
{
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"strand": true,
"consequences": [
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],
"exon_rank": null,
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"exon_count": 25,
"intron_rank": 15,
"intron_rank_end": null,
"gene_symbol": "OSBPL6",
"gene_hgnc_id": 16388,
"hgvs_c": "c.1516-2587C>A",
"hgvs_p": null,
"transcript": "ENST00000932932.1",
"protein_id": "ENSP00000602991.1",
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},
{
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"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 25,
"intron_rank": 15,
"intron_rank_end": null,
"gene_symbol": "OSBPL6",
"gene_hgnc_id": 16388,
"hgvs_c": "c.1501-2587C>A",
"hgvs_p": null,
"transcript": "ENST00000881575.1",
"protein_id": "ENSP00000551634.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 923,
"cds_start": null,
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"cdna_start": null,
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"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000881575.1"
},
{
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"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 25,
"intron_rank": 15,
"intron_rank_end": null,
"gene_symbol": "OSBPL6",
"gene_hgnc_id": 16388,
"hgvs_c": "c.1501-2587C>A",
"hgvs_p": null,
"transcript": "ENST00000881582.1",
"protein_id": "ENSP00000551641.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 923,
"cds_start": null,
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"cds_length": 2772,
"cdna_start": null,
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"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000881582.1"
},
{
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