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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 20-25224395-C-G (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=20&pos=25224395&ref=C&alt=G&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "20",
"pos": 25224395,
"ref": "C",
"alt": "G",
"effect": "intron_variant",
"transcript": "NM_001247.5",
"consequences": [
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 15,
"intron_rank": 13,
"intron_rank_end": null,
"gene_symbol": "ENTPD6",
"gene_hgnc_id": 3368,
"hgvs_c": "c.1243+238C>G",
"hgvs_p": null,
"transcript": "NM_001247.5",
"protein_id": "NP_001238.3",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 484,
"cds_start": null,
"cds_end": null,
"cds_length": 1455,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 4104,
"mane_select": "ENST00000376652.9",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001247.5"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": true,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 15,
"intron_rank": 13,
"intron_rank_end": null,
"gene_symbol": "ENTPD6",
"gene_hgnc_id": 3368,
"hgvs_c": "c.1243+238C>G",
"hgvs_p": null,
"transcript": "ENST00000376652.9",
"protein_id": "ENSP00000365840.4",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 484,
"cds_start": null,
"cds_end": null,
"cds_length": 1455,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 4104,
"mane_select": "NM_001247.5",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000376652.9"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 15,
"intron_rank": 13,
"intron_rank_end": null,
"gene_symbol": "ENTPD6",
"gene_hgnc_id": 3368,
"hgvs_c": "c.1240+238C>G",
"hgvs_p": null,
"transcript": "ENST00000360031.6",
"protein_id": "ENSP00000353131.2",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 483,
"cds_start": null,
"cds_end": null,
"cds_length": 1452,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 2766,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000360031.6"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": 12,
"intron_rank_end": null,
"gene_symbol": "ENTPD6",
"gene_hgnc_id": 3368,
"hgvs_c": "c.1159+238C>G",
"hgvs_p": null,
"transcript": "ENST00000354989.10",
"protein_id": "ENSP00000347084.6",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 456,
"cds_start": null,
"cds_end": null,
"cds_length": 1371,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 2708,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000354989.10"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 15,
"intron_rank": 13,
"intron_rank_end": null,
"gene_symbol": "ENTPD6",
"gene_hgnc_id": 3368,
"hgvs_c": "c.1411+238C>G",
"hgvs_p": null,
"transcript": "ENST00000886631.1",
"protein_id": "ENSP00000556690.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 540,
"cds_start": null,
"cds_end": null,
"cds_length": 1623,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 2865,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000886631.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 15,
"intron_rank": 13,
"intron_rank_end": null,
"gene_symbol": "ENTPD6",
"gene_hgnc_id": 3368,
"hgvs_c": "c.1408+238C>G",
"hgvs_p": null,
"transcript": "ENST00000886618.1",
"protein_id": "ENSP00000556677.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 539,
"cds_start": null,
"cds_end": null,
"cds_length": 1620,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 2914,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000886618.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 15,
"intron_rank": 13,
"intron_rank_end": null,
"gene_symbol": "ENTPD6",
"gene_hgnc_id": 3368,
"hgvs_c": "c.1408+238C>G",
"hgvs_p": null,
"transcript": "ENST00000954411.1",
"protein_id": "ENSP00000624470.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 539,
"cds_start": null,
"cds_end": null,
"cds_length": 1620,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 2888,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000954411.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": 12,
"intron_rank_end": null,
"gene_symbol": "ENTPD6",
"gene_hgnc_id": 3368,
"hgvs_c": "c.1309+238C>G",
"hgvs_p": null,
"transcript": "ENST00000913218.1",
"protein_id": "ENSP00000583277.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 506,
"cds_start": null,
"cds_end": null,
"cds_length": 1521,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 2795,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000913218.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 16,
"intron_rank": 14,
"intron_rank_end": null,
"gene_symbol": "ENTPD6",
"gene_hgnc_id": 3368,
"hgvs_c": "c.1276+238C>G",
"hgvs_p": null,
"transcript": "ENST00000886628.1",
"protein_id": "ENSP00000556687.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 495,
"cds_start": null,
"cds_end": null,
"cds_length": 1488,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 2756,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000886628.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 15,
"intron_rank": 13,
"intron_rank_end": null,
"gene_symbol": "ENTPD6",
"gene_hgnc_id": 3368,
"hgvs_c": "c.1261+238C>G",
"hgvs_p": null,
"transcript": "ENST00000886629.1",
"protein_id": "ENSP00000556688.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 490,
"cds_start": null,
"cds_end": null,
"cds_length": 1473,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 2740,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000886629.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 15,
"intron_rank": 13,
"intron_rank_end": null,
"gene_symbol": "ENTPD6",
"gene_hgnc_id": 3368,
"hgvs_c": "c.1243+238C>G",
"hgvs_p": null,
"transcript": "NM_001322378.2",
"protein_id": "NP_001309307.2",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 484,
"cds_start": null,
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"cdna_start": null,
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"cdna_length": 4230,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001322378.2"
},
{
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"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 16,
"intron_rank": 14,
"intron_rank_end": null,
"gene_symbol": "ENTPD6",
"gene_hgnc_id": 3368,
"hgvs_c": "c.1243+238C>G",
"hgvs_p": null,
"transcript": "ENST00000886616.1",
"protein_id": "ENSP00000556675.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 484,
"cds_start": null,
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"cdna_start": null,
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"cdna_length": 2853,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000886616.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 16,
"intron_rank": 14,
"intron_rank_end": null,
"gene_symbol": "ENTPD6",
"gene_hgnc_id": 3368,
"hgvs_c": "c.1243+238C>G",
"hgvs_p": null,
"transcript": "ENST00000886619.1",
"protein_id": "ENSP00000556678.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 484,
"cds_start": null,
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"cdna_start": null,
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"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000886619.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
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],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 16,
"intron_rank": 14,
"intron_rank_end": null,
"gene_symbol": "ENTPD6",
"gene_hgnc_id": 3368,
"hgvs_c": "c.1243+238C>G",
"hgvs_p": null,
"transcript": "ENST00000886621.1",
"protein_id": "ENSP00000556680.1",
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"cdna_start": null,
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"mane_select": null,
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"biotype": "protein_coding",
"feature": "ENST00000886621.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 17,
"intron_rank": 15,
"intron_rank_end": null,
"gene_symbol": "ENTPD6",
"gene_hgnc_id": 3368,
"hgvs_c": "c.1243+238C>G",
"hgvs_p": null,
"transcript": "ENST00000886624.1",
"protein_id": "ENSP00000556683.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 484,
"cds_start": null,
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"cdna_start": null,
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"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000886624.1"
},
{
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"protein_coding": true,
"strand": true,
"consequences": [
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],
"exon_rank": null,
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"exon_count": 16,
"intron_rank": 14,
"intron_rank_end": null,
"gene_symbol": "ENTPD6",
"gene_hgnc_id": 3368,
"hgvs_c": "c.1243+238C>G",
"hgvs_p": null,
"transcript": "ENST00000886627.1",
"protein_id": "ENSP00000556686.1",
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"biotype": "protein_coding",
"feature": "ENST00000886627.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 16,
"intron_rank": 14,
"intron_rank_end": null,
"gene_symbol": "ENTPD6",
"gene_hgnc_id": 3368,
"hgvs_c": "c.1243+238C>G",
"hgvs_p": null,
"transcript": "ENST00000886630.1",
"protein_id": "ENSP00000556689.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 484,
"cds_start": null,
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"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000886630.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
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],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 15,
"intron_rank": 13,
"intron_rank_end": null,
"gene_symbol": "ENTPD6",
"gene_hgnc_id": 3368,
"hgvs_c": "c.1243+238C>G",
"hgvs_p": null,
"transcript": "ENST00000886632.1",
"protein_id": "ENSP00000556691.1",
"transcript_support_level": null,
"aa_start": null,
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"aa_length": 484,
"cds_start": null,
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"cdna_start": null,
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"feature": "ENST00000886632.1"
},
{
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"strand": true,
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],
"exon_rank": null,
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"exon_count": 16,
"intron_rank": 14,
"intron_rank_end": null,
"gene_symbol": "ENTPD6",
"gene_hgnc_id": 3368,
"hgvs_c": "c.1243+238C>G",
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"transcript": "ENST00000886633.1",
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},
{
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"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 16,
"intron_rank": 14,
"intron_rank_end": null,
"gene_symbol": "ENTPD6",
"gene_hgnc_id": 3368,
"hgvs_c": "c.1243+238C>G",
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"transcript": "ENST00000913220.1",
"protein_id": "ENSP00000583279.1",
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},
{
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"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"intron_rank": 15,
"intron_rank_end": null,
"gene_symbol": "ENTPD6",
"gene_hgnc_id": 3368,
"hgvs_c": "c.1243+238C>G",
"hgvs_p": null,
"transcript": "ENST00000954409.1",
"protein_id": "ENSP00000624468.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
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"cds_start": null,
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"cdna_start": null,
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"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000954409.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 16,
"intron_rank": 14,
"intron_rank_end": null,
"gene_symbol": "ENTPD6",
"gene_hgnc_id": 3368,
"hgvs_c": "c.1243+238C>G",
"hgvs_p": null,
"transcript": "ENST00000954410.1",
"protein_id": "ENSP00000624469.1",
"transcript_support_level": null,
"aa_start": null,
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"aa_length": 484,
"cds_start": null,
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"cdna_start": null,
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"cdna_length": 2867,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000954410.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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}
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"message": null
}