← Back to variant description

GeneBe API Showcase

This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.

API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.

Documentation & Advanced Usage

Complete API documentation:docs.genebe.net/docs/api/overview/

Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/

Python client for pandas:pypi.org/project/genebe/

Java CLI for VCF files:github.com/pstawinski/genebe-cli

All tools documented at:docs.genebe.net

API Request Examples for Variant: 4-79984831-AG-A (hg38)

Bash / cURL Example

bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=4&pos=79984831&ref=AG&alt=A&genome=hg38&allGenes=true"

API Response

json
{
  "message": null,
  "variants": [
    {
      "acmg_by_gene": [
        {
          "benign_score": 0,
          "criteria": [
            "PVS1",
            "PM2",
            "PP5_Moderate"
          ],
          "effects": [
            "frameshift_variant"
          ],
          "gene_symbol": "ANTXR2",
          "hgnc_id": 21732,
          "hgvs_c": "c.1073delC",
          "hgvs_p": "p.Pro358fs",
          "inheritance_mode": "AR",
          "pathogenic_score": 12,
          "score": 12,
          "transcript": "NM_001145794.2",
          "verdict": "Pathogenic"
        }
      ],
      "acmg_classification": "Pathogenic",
      "acmg_criteria": "PVS1,PM2,PP5_Moderate",
      "acmg_score": 12,
      "allele_count_reference_population": 0,
      "alphamissense_prediction": null,
      "alphamissense_score": null,
      "alt": "A",
      "apogee2_prediction": null,
      "apogee2_score": null,
      "bayesdelnoaf_prediction": null,
      "bayesdelnoaf_score": null,
      "chr": "4",
      "clinvar_classification": "Pathogenic",
      "clinvar_disease": "Hyaline fibromatosis syndrome",
      "clinvar_review_status": "criteria provided, single submitter",
      "clinvar_submissions_summary": "P:1",
      "computational_prediction_selected": null,
      "computational_score_selected": null,
      "computational_source_selected": null,
      "consequences": [
        {
          "aa_alt": null,
          "aa_end": null,
          "aa_length": 488,
          "aa_ref": "P",
          "aa_start": 358,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 8419,
          "cdna_start": 1742,
          "cds_end": null,
          "cds_length": 1467,
          "cds_start": 1073,
          "consequences": [
            "frameshift_variant"
          ],
          "exon_count": 17,
          "exon_rank": 13,
          "exon_rank_end": null,
          "feature": "NM_058172.6",
          "gene_hgnc_id": 21732,
          "gene_symbol": "ANTXR2",
          "hgvs_c": "c.1073delC",
          "hgvs_p": "p.Pro358fs",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": "ENST00000403729.7",
          "protein_coding": true,
          "protein_id": "NP_477520.2",
          "strand": false,
          "transcript": "NM_058172.6",
          "transcript_support_level": null
        },
        {
          "aa_alt": null,
          "aa_end": null,
          "aa_length": 488,
          "aa_ref": "P",
          "aa_start": 358,
          "biotype": "protein_coding",
          "canonical": true,
          "cdna_end": null,
          "cdna_length": 8419,
          "cdna_start": 1742,
          "cds_end": null,
          "cds_length": 1467,
          "cds_start": 1073,
          "consequences": [
            "frameshift_variant"
          ],
          "exon_count": 17,
          "exon_rank": 13,
          "exon_rank_end": null,
          "feature": "ENST00000403729.7",
          "gene_hgnc_id": 21732,
          "gene_symbol": "ANTXR2",
          "hgvs_c": "c.1073delC",
          "hgvs_p": "p.Pro358fs",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": "NM_058172.6",
          "protein_coding": true,
          "protein_id": "ENSP00000385575.2",
          "strand": false,
          "transcript": "ENST00000403729.7",
          "transcript_support_level": 1
        },
        {
          "aa_alt": null,
          "aa_end": null,
          "aa_length": 489,
          "aa_ref": "P",
          "aa_start": 358,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 1473,
          "cdna_start": 1076,
          "cds_end": null,
          "cds_length": 1470,
          "cds_start": 1073,
          "consequences": [
            "frameshift_variant"
          ],
          "exon_count": 16,
          "exon_rank": 13,
          "exon_rank_end": null,
          "feature": "ENST00000307333.7",
          "gene_hgnc_id": 21732,
          "gene_symbol": "ANTXR2",
          "hgvs_c": "c.1073delC",
          "hgvs_p": "p.Pro358fs",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000306185.6",
          "strand": false,
          "transcript": "ENST00000307333.7",
          "transcript_support_level": 1
        },
        {
          "aa_alt": null,
          "aa_end": null,
          "aa_length": 411,
          "aa_ref": "P",
          "aa_start": 281,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 1469,
          "cdna_start": 999,
          "cds_end": null,
          "cds_length": 1236,
          "cds_start": 842,
          "consequences": [
            "frameshift_variant"
          ],
          "exon_count": 17,
          "exon_rank": 13,
          "exon_rank_end": null,
          "feature": "ENST00000404191.5",
          "gene_hgnc_id": 21732,
          "gene_symbol": "ANTXR2",
          "hgvs_c": "c.842delC",
          "hgvs_p": "p.Pro281fs",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000384028.1",
          "strand": false,
          "transcript": "ENST00000404191.5",
          "transcript_support_level": 1
        },
        {
          "aa_alt": null,
          "aa_end": null,
          "aa_length": 386,
          "aa_ref": "P",
          "aa_start": 255,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 1343,
          "cdna_start": 904,
          "cds_end": null,
          "cds_length": 1161,
          "cds_start": 764,
          "consequences": [
            "frameshift_variant"
          ],
          "exon_count": 12,
          "exon_rank": 9,
          "exon_rank_end": null,
          "feature": "ENST00000346652.10",
          "gene_hgnc_id": 21732,
          "gene_symbol": "ANTXR2",
          "hgvs_c": "c.764delC",
          "hgvs_p": "p.Pro255fs",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000314883.6",
          "strand": false,
          "transcript": "ENST00000346652.10",
          "transcript_support_level": 1
        },
        {
          "aa_alt": null,
          "aa_end": null,
          "aa_length": 505,
          "aa_ref": "P",
          "aa_start": 358,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 3495,
          "cdna_start": 1227,
          "cds_end": null,
          "cds_length": 1518,
          "cds_start": 1073,
          "consequences": [
            "frameshift_variant"
          ],
          "exon_count": 18,
          "exon_rank": 13,
          "exon_rank_end": null,
          "feature": "ENST00000680913.1",
          "gene_hgnc_id": 21732,
          "gene_symbol": "ANTXR2",
          "hgvs_c": "c.1073delC",
          "hgvs_p": "p.Pro358fs",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000505640.1",
          "strand": false,
          "transcript": "ENST00000680913.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": null,
          "aa_end": null,
          "aa_length": 496,
          "aa_ref": "P",
          "aa_start": 366,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 3889,
          "cdna_start": 1637,
          "cds_end": null,
          "cds_length": 1491,
          "cds_start": 1097,
          "consequences": [
            "frameshift_variant"
          ],
          "exon_count": 18,
          "exon_rank": 14,
          "exon_rank_end": null,
          "feature": "ENST00000958991.1",
          "gene_hgnc_id": 21732,
          "gene_symbol": "ANTXR2",
          "hgvs_c": "c.1097delC",
          "hgvs_p": "p.Pro366fs",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000629050.1",
          "strand": false,
          "transcript": "ENST00000958991.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": null,
          "aa_end": null,
          "aa_length": 489,
          "aa_ref": "P",
          "aa_start": 358,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 2192,
          "cdna_start": 1742,
          "cds_end": null,
          "cds_length": 1470,
          "cds_start": 1073,
          "consequences": [
            "frameshift_variant"
          ],
          "exon_count": 16,
          "exon_rank": 13,
          "exon_rank_end": null,
          "feature": "NM_001145794.2",
          "gene_hgnc_id": 21732,
          "gene_symbol": "ANTXR2",
          "hgvs_c": "c.1073delC",
          "hgvs_p": "p.Pro358fs",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "NP_001139266.1",
          "strand": false,
          "transcript": "NM_001145794.2",
          "transcript_support_level": null
        },
        {
          "aa_alt": null,
          "aa_end": null,
          "aa_length": 488,
          "aa_ref": "P",
          "aa_start": 358,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 2484,
          "cdna_start": 1506,
          "cds_end": null,
          "cds_length": 1467,
          "cds_start": 1073,
          "consequences": [
            "frameshift_variant"
          ],
          "exon_count": 18,
          "exon_rank": 13,
          "exon_rank_end": null,
          "feature": "ENST00000681115.1",
          "gene_hgnc_id": 21732,
          "gene_symbol": "ANTXR2",
          "hgvs_c": "c.1073delC",
          "hgvs_p": "p.Pro358fs",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000505618.1",
          "strand": false,
          "transcript": "ENST00000681115.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": null,
          "aa_end": null,
          "aa_length": 488,
          "aa_ref": "P",
          "aa_start": 358,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 4420,
          "cdna_start": 1435,
          "cds_end": null,
          "cds_length": 1467,
          "cds_start": 1073,
          "consequences": [
            "frameshift_variant"
          ],
          "exon_count": 18,
          "exon_rank": 14,
          "exon_rank_end": null,
          "feature": "ENST00000958987.1",
          "gene_hgnc_id": 21732,
          "gene_symbol": "ANTXR2",
          "hgvs_c": "c.1073delC",
          "hgvs_p": "p.Pro358fs",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000629046.1",
          "strand": false,
          "transcript": "ENST00000958987.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": null,
          "aa_end": null,
          "aa_length": 487,
          "aa_ref": "P",
          "aa_start": 358,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 5453,
          "cdna_start": 1839,
          "cds_end": null,
          "cds_length": 1464,
          "cds_start": 1073,
          "consequences": [
            "frameshift_variant"
          ],
          "exon_count": 17,
          "exon_rank": 13,
          "exon_rank_end": null,
          "feature": "ENST00000958986.1",
          "gene_hgnc_id": 21732,
          "gene_symbol": "ANTXR2",
          "hgvs_c": "c.1073delC",
          "hgvs_p": "p.Pro358fs",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000629045.1",
          "strand": false,
          "transcript": "ENST00000958986.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": null,
          "aa_end": null,
          "aa_length": 487,
          "aa_ref": "P",
          "aa_start": 357,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 3873,
          "cdna_start": 1622,
          "cds_end": null,
          "cds_length": 1464,
          "cds_start": 1070,
          "consequences": [
            "frameshift_variant"
          ],
          "exon_count": 17,
          "exon_rank": 13,
          "exon_rank_end": null,
          "feature": "ENST00000958990.1",
          "gene_hgnc_id": 21732,
          "gene_symbol": "ANTXR2",
          "hgvs_c": "c.1070delC",
          "hgvs_p": "p.Pro357fs",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000629049.1",
          "strand": false,
          "transcript": "ENST00000958990.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": null,
          "aa_end": null,
          "aa_length": 480,
          "aa_ref": "P",
          "aa_start": 350,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 3809,
          "cdna_start": 1559,
          "cds_end": null,
          "cds_length": 1443,
          "cds_start": 1049,
          "consequences": [
            "frameshift_variant"
          ],
          "exon_count": 17,
          "exon_rank": 13,
          "exon_rank_end": null,
          "feature": "ENST00000958993.1",
          "gene_hgnc_id": 21732,
          "gene_symbol": "ANTXR2",
          "hgvs_c": "c.1049delC",
          "hgvs_p": "p.Pro350fs",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000629052.1",
          "strand": false,
          "transcript": "ENST00000958993.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": null,
          "aa_end": null,
          "aa_length": 464,
          "aa_ref": "P",
          "aa_start": 334,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 4116,
          "cdna_start": 1160,
          "cds_end": null,
          "cds_length": 1395,
          "cds_start": 1001,
          "consequences": [
            "frameshift_variant"
          ],
          "exon_count": 16,
          "exon_rank": 12,
          "exon_rank_end": null,
          "feature": "ENST00000958988.1",
          "gene_hgnc_id": 21732,
          "gene_symbol": "ANTXR2",
          "hgvs_c": "c.1001delC",
          "hgvs_p": "p.Pro334fs",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000629047.1",
          "strand": false,
          "transcript": "ENST00000958988.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": null,
          "aa_end": null,
          "aa_length": 457,
          "aa_ref": "P",
          "aa_start": 358,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 3746,
          "cdna_start": 1587,
          "cds_end": null,
          "cds_length": 1374,
          "cds_start": 1073,
          "consequences": [
            "frameshift_variant"
          ],
          "exon_count": 16,
          "exon_rank": 13,
          "exon_rank_end": null,
          "feature": "ENST00000958992.1",
          "gene_hgnc_id": 21732,
          "gene_symbol": "ANTXR2",
          "hgvs_c": "c.1073delC",
          "hgvs_p": "p.Pro358fs",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000629051.1",
          "strand": false,
          "transcript": "ENST00000958992.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": null,
          "aa_end": null,
          "aa_length": 456,
          "aa_ref": "P",
          "aa_start": 326,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 3385,
          "cdna_start": 1133,
          "cds_end": null,
          "cds_length": 1371,
          "cds_start": 977,
          "consequences": [
            "frameshift_variant"
          ],
          "exon_count": 16,
          "exon_rank": 12,
          "exon_rank_end": null,
          "feature": "ENST00000875745.1",
          "gene_hgnc_id": 21732,
          "gene_symbol": "ANTXR2",
          "hgvs_c": "c.977delC",
          "hgvs_p": "p.Pro326fs",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000545804.1",
          "strand": false,
          "transcript": "ENST00000875745.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": null,
          "aa_end": null,
          "aa_length": 455,
          "aa_ref": "P",
          "aa_start": 325,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 3922,
          "cdna_start": 1617,
          "cds_end": null,
          "cds_length": 1368,
          "cds_start": 974,
          "consequences": [
            "frameshift_variant"
          ],
          "exon_count": 16,
          "exon_rank": 12,
          "exon_rank_end": null,
          "feature": "ENST00000958989.1",
          "gene_hgnc_id": 21732,
          "gene_symbol": "ANTXR2",
          "hgvs_c": "c.974delC",
          "hgvs_p": "p.Pro325fs",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000629048.1",
          "strand": false,
          "transcript": "ENST00000958989.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": null,
          "aa_end": null,
          "aa_length": 411,
          "aa_ref": "P",
          "aa_start": 281,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 7676,
          "cdna_start": 999,
          "cds_end": null,
          "cds_length": 1236,
          "cds_start": 842,
          "consequences": [
            "frameshift_variant"
          ],
          "exon_count": 17,
          "exon_rank": 13,
          "exon_rank_end": null,
          "feature": "NM_001286780.2",
          "gene_hgnc_id": 21732,
          "gene_symbol": "ANTXR2",
          "hgvs_c": "c.842delC",
          "hgvs_p": "p.Pro281fs",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "NP_001273709.1",
          "strand": false,
          "transcript": "NM_001286780.2",
          "transcript_support_level": null
        },
        {
          "aa_alt": null,
          "aa_end": null,
          "aa_length": 411,
          "aa_ref": "P",
          "aa_start": 281,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 8119,
          "cdna_start": 1442,
          "cds_end": null,
          "cds_length": 1236,
          "cds_start": 842,
          "consequences": [
            "frameshift_variant"
          ],
          "exon_count": 17,
          "exon_rank": 13,
          "exon_rank_end": null,
          "feature": "NM_001286781.2",
          "gene_hgnc_id": 21732,
          "gene_symbol": "ANTXR2",
          "hgvs_c": "c.842delC",
          "hgvs_p": "p.Pro281fs",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "NP_001273710.1",
          "strand": false,
          "transcript": "NM_001286781.2",
          "transcript_support_level": null
        },
        {
          "aa_alt": null,
          "aa_end": null,
          "aa_length": 411,
          "aa_ref": "P",
          "aa_start": 281,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 3507,
          "cdna_start": 1290,
          "cds_end": null,
          "cds_length": 1236,
          "cds_start": 842,
          "consequences": [
            "frameshift_variant"
          ],
          "exon_count": 17,
          "exon_rank": 13,
          "exon_rank_end": null,
          "feature": "ENST00000681710.1",
          "gene_hgnc_id": 21732,
          "gene_symbol": "ANTXR2",
          "hgvs_c": "c.842delC",
          "hgvs_p": "p.Pro281fs",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000505865.1",
          "strand": false,
          "transcript": "ENST00000681710.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": null,
          "aa_end": null,
          "aa_length": 442,
          "aa_ref": null,
          "aa_start": null,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 3691,
          "cdna_start": null,
          "cds_end": null,
          "cds_length": 1329,
          "cds_start": null,
          "consequences": [
            "intron_variant"
          ],
          "exon_count": 15,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "ENST00000875744.1",
          "gene_hgnc_id": 21732,
          "gene_symbol": "ANTXR2",
          "hgvs_c": "c.1042-6658delC",
          "hgvs_p": null,
          "intron_rank": 12,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000545803.1",
          "strand": false,
          "transcript": "ENST00000875744.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": null,
          "aa_end": null,
          "aa_length": null,
          "aa_ref": null,
          "aa_start": null,
          "biotype": "nonsense_mediated_decay",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 2026,
          "cdna_start": null,
          "cds_end": null,
          "cds_length": null,
          "cds_start": null,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_count": 18,
          "exon_rank": 13,
          "exon_rank_end": null,
          "feature": "ENST00000449651.5",
          "gene_hgnc_id": 21732,
          "gene_symbol": "ANTXR2",
          "hgvs_c": "n.*223delC",
          "hgvs_p": null,
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": false,
          "protein_id": "ENSP00000413700.1",
          "strand": false,
          "transcript": "ENST00000449651.5",
          "transcript_support_level": 2
        },
        {
          "aa_alt": null,
          "aa_end": null,
          "aa_length": null,
          "aa_ref": null,
          "aa_start": null,
          "biotype": "nonsense_mediated_decay",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 3656,
          "cdna_start": null,
          "cds_end": null,
          "cds_length": null,
          "cds_start": null,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_count": 18,
          "exon_rank": 13,
          "exon_rank_end": null,
          "feature": "ENST00000679571.1",
          "gene_hgnc_id": 21732,
          "gene_symbol": "ANTXR2",
          "hgvs_c": "n.842delC",
          "hgvs_p": null,
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": false,
          "protein_id": "ENSP00000506307.1",
          "strand": false,
          "transcript": "ENST00000679571.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": null,
          "aa_end": null,
          "aa_length": null,
          "aa_ref": null,
          "aa_start": null,
          "biotype": "nonsense_mediated_decay",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 2026,
          "cdna_start": null,
          "cds_end": null,
          "cds_length": null,
          "cds_start": null,
          "consequences": [
            "3_prime_UTR_variant"
          ],
          "exon_count": 18,
          "exon_rank": 13,
          "exon_rank_end": null,
          "feature": "ENST00000449651.5",
          "gene_hgnc_id": 21732,
          "gene_symbol": "ANTXR2",
          "hgvs_c": "n.*223delC",
          "hgvs_p": null,
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": false,
          "protein_id": "ENSP00000413700.1",
          "strand": false,
          "transcript": "ENST00000449651.5",
          "transcript_support_level": 2
        }
      ],
      "custom_annotations": null,
      "dbscsnv_ada_prediction": null,
      "dbscsnv_ada_score": null,
      "dbsnp": "rs312262690",
      "effect": "frameshift_variant",
      "frequency_reference_population": null,
      "gene_hgnc_id": 21732,
      "gene_symbol": "ANTXR2",
      "gnomad_exomes_ac": null,
      "gnomad_exomes_af": null,
      "gnomad_exomes_homalt": null,
      "gnomad_genomes_ac": null,
      "gnomad_genomes_af": null,
      "gnomad_genomes_homalt": null,
      "gnomad_mito_heteroplasmic": null,
      "gnomad_mito_homoplasmic": null,
      "hom_count_reference_population": 0,
      "mitotip_prediction": null,
      "mitotip_score": null,
      "pathogenicity_classification_combined": "Pathogenic",
      "phenotype_combined": "Hyaline fibromatosis syndrome",
      "phylop100way_prediction": "Uncertain_significance",
      "phylop100way_score": 5.137,
      "pos": 79984831,
      "ref": "AG",
      "revel_prediction": null,
      "revel_score": null,
      "splice_prediction_selected": "Benign",
      "splice_score_selected": 0,
      "splice_source_selected": "max_spliceai",
      "spliceai_max_prediction": "Benign",
      "spliceai_max_score": 0,
      "transcript": "NM_001145794.2"
    }
  ]
}
For research and educational, non-commercial use only. Not for clinical or diagnostic use. GeneBe does not provide medical advice. Data use for AI modeling is prohibited: if used, the cost is $0.001 per byte of downloaded uncompressed data.