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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 6-167024500-C-T (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=6&pos=167024500&ref=C&alt=T&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "6",
"pos": 167024500,
"ref": "C",
"alt": "T",
"effect": "intron_variant",
"transcript": "NM_007045.4",
"consequences": [
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": 8,
"intron_rank_end": null,
"gene_symbol": "CEP43",
"gene_hgnc_id": 17012,
"hgvs_c": "c.807-282C>T",
"hgvs_p": null,
"transcript": "NM_007045.4",
"protein_id": "NP_008976.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 399,
"cds_start": null,
"cds_end": null,
"cds_length": 1200,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "ENST00000366847.9",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_007045.4"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": true,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": 8,
"intron_rank_end": null,
"gene_symbol": "CEP43",
"gene_hgnc_id": 17012,
"hgvs_c": "c.807-282C>T",
"hgvs_p": null,
"transcript": "ENST00000366847.9",
"protein_id": "ENSP00000355812.3",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 399,
"cds_start": null,
"cds_end": null,
"cds_length": 1200,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "NM_007045.4",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000366847.9"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": true,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": 7,
"intron_rank_end": null,
"gene_symbol": "ENSG00000272980",
"gene_hgnc_id": null,
"hgvs_c": "c.747-282C>T",
"hgvs_p": null,
"transcript": "ENST00000705249.1",
"protein_id": "ENSP00000516101.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 402,
"cds_start": null,
"cds_end": null,
"cds_length": 1209,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000705249.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": 7,
"intron_rank_end": null,
"gene_symbol": "CEP43",
"gene_hgnc_id": 17012,
"hgvs_c": "c.747-282C>T",
"hgvs_p": null,
"transcript": "ENST00000349556.5",
"protein_id": "ENSP00000230248.6",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 379,
"cds_start": null,
"cds_end": null,
"cds_length": 1140,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000349556.5"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 15,
"intron_rank": 10,
"intron_rank_end": null,
"gene_symbol": "CEP43",
"gene_hgnc_id": 17012,
"hgvs_c": "c.993-282C>T",
"hgvs_p": null,
"transcript": "ENST00000705176.1",
"protein_id": "ENSP00000516078.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 461,
"cds_start": null,
"cds_end": null,
"cds_length": 1386,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000705176.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": 9,
"intron_rank_end": null,
"gene_symbol": "CEP43",
"gene_hgnc_id": 17012,
"hgvs_c": "c.933-282C>T",
"hgvs_p": null,
"transcript": "ENST00000705175.1",
"protein_id": "ENSP00000516077.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 441,
"cds_start": null,
"cds_end": null,
"cds_length": 1326,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000705175.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": 8,
"intron_rank_end": null,
"gene_symbol": "CEP43",
"gene_hgnc_id": 17012,
"hgvs_c": "c.807-282C>T",
"hgvs_p": null,
"transcript": "ENST00000936350.1",
"protein_id": "ENSP00000606409.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 410,
"cds_start": null,
"cds_end": null,
"cds_length": 1233,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000936350.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": 8,
"intron_rank_end": null,
"gene_symbol": "CEP43",
"gene_hgnc_id": 17012,
"hgvs_c": "c.807-285C>T",
"hgvs_p": null,
"transcript": "ENST00000878124.1",
"protein_id": "ENSP00000548183.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 398,
"cds_start": null,
"cds_end": null,
"cds_length": 1197,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000878124.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": 8,
"intron_rank_end": null,
"gene_symbol": "CEP43",
"gene_hgnc_id": 17012,
"hgvs_c": "c.792-285C>T",
"hgvs_p": null,
"transcript": "ENST00000878128.1",
"protein_id": "ENSP00000548187.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 393,
"cds_start": null,
"cds_end": null,
"cds_length": 1182,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000878128.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": 7,
"intron_rank_end": null,
"gene_symbol": "CEP43",
"gene_hgnc_id": 17012,
"hgvs_c": "c.747-282C>T",
"hgvs_p": null,
"transcript": "ENST00000878122.1",
"protein_id": "ENSP00000548181.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 390,
"cds_start": null,
"cds_end": null,
"cds_length": 1173,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000878122.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": 7,
"intron_rank_end": null,
"gene_symbol": "CEP43",
"gene_hgnc_id": 17012,
"hgvs_c": "c.747-282C>T",
"hgvs_p": null,
"transcript": "ENST00000878125.1",
"protein_id": "ENSP00000548184.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 389,
"cds_start": null,
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"cdna_start": null,
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"biotype": "protein_coding",
"feature": "ENST00000878125.1"
},
{
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"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 12,
"intron_rank": 7,
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"gene_symbol": "CEP43",
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"hgvs_c": "c.744-282C>T",
"hgvs_p": null,
"transcript": "ENST00000936349.1",
"protein_id": "ENSP00000606408.1",
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"aa_start": null,
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"cds_start": null,
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"cdna_start": null,
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"biotype": "protein_coding",
"feature": "ENST00000936349.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 12,
"intron_rank": 7,
"intron_rank_end": null,
"gene_symbol": "CEP43",
"gene_hgnc_id": 17012,
"hgvs_c": "c.747-282C>T",
"hgvs_p": null,
"transcript": "NM_194429.3",
"protein_id": "NP_919410.1",
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"aa_start": null,
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"aa_length": 379,
"cds_start": null,
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"cdna_start": null,
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"feature": "NM_194429.3"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
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],
"exon_rank": null,
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"exon_count": 13,
"intron_rank": 8,
"intron_rank_end": null,
"gene_symbol": "ENSG00000272980",
"gene_hgnc_id": null,
"hgvs_c": "c.807-285C>T",
"hgvs_p": null,
"transcript": "ENST00000705256.1",
"protein_id": "ENSP00000516107.1",
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"biotype": "protein_coding",
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},
{
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"protein_coding": true,
"strand": true,
"consequences": [
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],
"exon_rank": null,
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"exon_count": 12,
"intron_rank": 7,
"intron_rank_end": null,
"gene_symbol": "CEP43",
"gene_hgnc_id": 17012,
"hgvs_c": "c.747-285C>T",
"hgvs_p": null,
"transcript": "ENST00000705239.1",
"protein_id": "ENSP00000516097.1",
"transcript_support_level": null,
"aa_start": null,
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"cds_start": null,
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"cdna_start": null,
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"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000705239.1"
},
{
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"protein_coding": true,
"strand": true,
"consequences": [
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],
"exon_rank": null,
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"exon_count": 12,
"intron_rank": 7,
"intron_rank_end": null,
"gene_symbol": "CEP43",
"gene_hgnc_id": 17012,
"hgvs_c": "c.744-282C>T",
"hgvs_p": null,
"transcript": "ENST00000705242.1",
"protein_id": "ENSP00000516100.1",
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"feature": "ENST00000705242.1"
},
{
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"strand": true,
"consequences": [
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],
"exon_rank": null,
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"exon_count": 12,
"intron_rank": 7,
"intron_rank_end": null,
"gene_symbol": "CEP43",
"gene_hgnc_id": 17012,
"hgvs_c": "c.747-282C>T",
"hgvs_p": null,
"transcript": "ENST00000936351.1",
"protein_id": "ENSP00000606410.1",
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"cds_start": null,
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"mane_select": null,
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"biotype": "protein_coding",
"feature": "ENST00000936351.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
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],
"exon_rank": null,
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"exon_count": 12,
"intron_rank": 8,
"intron_rank_end": null,
"gene_symbol": "CEP43",
"gene_hgnc_id": 17012,
"hgvs_c": "c.807-282C>T",
"hgvs_p": null,
"transcript": "ENST00000705235.1",
"protein_id": "ENSP00000516093.1",
"transcript_support_level": null,
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"aa_end": null,
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"cds_start": null,
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},
{
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"protein_coding": true,
"strand": true,
"consequences": [
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],
"exon_rank": null,
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"intron_rank": 8,
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"gene_symbol": "CEP43",
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"hgvs_c": "c.804-282C>T",
"hgvs_p": null,
"transcript": "ENST00000953640.1",
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},
{
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"strand": true,
"consequences": [
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],
"exon_rank": null,
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"exon_count": 11,
"intron_rank": 7,
"intron_rank_end": null,
"gene_symbol": "CEP43",
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"hgvs_p": null,
"transcript": "ENST00000936352.1",
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},
{
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"protein_coding": true,
"strand": true,
"consequences": [
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],
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"intron_rank": 6,
"intron_rank_end": null,
"gene_symbol": "CEP43",
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"hgvs_c": "c.651-282C>T",
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"transcript": "ENST00000878123.1",
"protein_id": "ENSP00000548182.1",
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"cds_start": null,
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"mane_select": null,
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"biotype": "protein_coding",
"feature": "ENST00000878123.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": 7,
"intron_rank_end": null,
"gene_symbol": "CEP43",
"gene_hgnc_id": 17012,
"hgvs_c": "c.747-282C>T",
"hgvs_p": null,
"transcript": "ENST00000705236.1",
"protein_id": "ENSP00000516094.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 356,
"cds_start": null,
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"cds_length": 1071,
"cdna_start": null,
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"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000705236.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": 7,
"intron_rank_end": null,
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}