GPR32

G protein-coupled receptor 32, the group of G protein-coupled receptors, Class A orphans

Basic information

Region (hg38): 19:50770464-50771732

Links

ENSG00000142511 ∙ NCBI:2854 ∙ OMIM:603195 ∙ HGNC:4487 ∙ Uniprot:O75388 ∙ AlphaFold ∙ GenCC ∙ jax ∙ Sfari ∙ GnomAD ∙ Pubmed ∙ ClinVar

Phenotypes

GenCC

Source: genCC

No genCC data.

ClinVar

This is a list of variants' phenotypes submitted to ClinVar and linked to the GPR32 gene.

Variants pathogenicity by type

Statistics on ClinVar variants can assist in determining whether a specific variant type in the GPR32 gene is commonly pathogenic or not.

In the table, we include only reliable ClinVar variants with their consequences to MANE Select, Mane Plus Clinical transcripts, or transcripts with TSL equals 1. Click the count to view the source variants.

Warning: slight differences between displayed counts and the number of variants in ClinVar may occur, primarily due to (1) the application of a different transcript and/or consequence by our variant effect predictor or (2) differences in clinical significance: we classify Benign/Likely benign variants as Likely benign and Pathogenic/Likely pathogenic variants as Likely pathogenic.

Variant type	Pathogenic	Likely pathogenic	VUS	Likely benign	Benign	Sum
synonymous						0
missense			35	3		38
nonsense						0
start loss						0
frameshift						0
inframe indel						0
splice donor/acceptor (+/-2bp)						0
splice region						0
non coding						0
Total	0	0	35	3	0

Variants in GPR32

This is a list of pathogenic ClinVar variants found in the GPR32 region.

You can filter this list by clicking the number of variants in the Variants pathogenicity by type table.

Position	Type	Phenotype	Significance	ClinVar
19-50770605-A-T		not specified	Uncertain significance (May 16, 2023)
19-50770649-G-A		not specified	Uncertain significance (Oct 26, 2021)
19-50770668-G-C		not specified	Uncertain significance (Jan 06, 2023)
19-50770670-T-C		not specified	Uncertain significance (Nov 26, 2024)
19-50770689-A-G		not specified	Uncertain significance (Mar 06, 2023)
19-50770719-G-A		not specified	Uncertain significance (Nov 09, 2024)
19-50770728-G-C		not specified	Uncertain significance (Jun 30, 2022)
19-50770754-G-A		not specified	Uncertain significance (Feb 04, 2025)
19-50770776-T-C		not specified	Uncertain significance (Apr 01, 2024)
19-50770794-T-C		not specified	Uncertain significance (Jul 09, 2024)
19-50770799-A-G		not specified	Uncertain significance (Jul 09, 2024)
19-50770802-A-G		not specified	Uncertain significance (Jan 23, 2023)
19-50770902-A-G		not specified	Uncertain significance (Oct 16, 2024)
19-50770928-G-A		not specified	Uncertain significance (Oct 17, 2023)
19-50770986-A-T		not specified	Likely benign (Jun 02, 2023)
19-50771000-T-C		not specified	Likely benign (Jan 08, 2024)
19-50771003-A-G		not specified	Uncertain significance (Jan 31, 2023)
19-50771046-C-T		not specified	Uncertain significance (Feb 23, 2023)
19-50771070-G-A		not specified	Uncertain significance (Mar 07, 2024)
19-50771087-T-G		not specified	Uncertain significance (Jan 08, 2024)
19-50771093-G-A		not specified	Uncertain significance (Nov 22, 2022)
19-50771103-T-C		not specified	Uncertain significance (May 31, 2023)
19-50771120-T-G		not specified	Uncertain significance (Feb 16, 2023)
19-50771129-C-G		not specified	Uncertain significance (Aug 22, 2023)
19-50771138-C-T		not specified	Uncertain significance (Jul 19, 2023)

GnomAD

Source: gnomAD

Gene	Type	Bio Type	Transcript	Coding Exons	Length
GPR32	protein_coding	protein_coding	ENST00000270590	1	1269

pLI Probability LOF Intolerant	pRec Probability LOF Recessive	Individuals with no LOFs	Individuals with Homozygous LOFs	Individuals with Heterozygous LOFs	Defined	p

	Z-Score	Observed	Expected	Observed/Expected	Mutation Rate	Total Possible in Transcript
Missense	0.0323	222	223	0.994	0.0000143	2293
Missense in Polyphen		38	46.636	0.81482		547
Synonymous	-0.0378	100	99.5	1.00	0.00000648	782
Loss of Function

LoF frequencies by population

Ethnicity	Sum of pLOFs	p
African & African-American	0.00	0.00
Ashkenazi Jewish
East Asian
Finnish
European (Non-Finnish)
Middle Eastern
South Asian
Other

dbNSFP

Source: dbNSFP

• Function: FUNCTION: Orphan receptor.
• Pathway: GPCRs, Class A Rhodopsin-like;Signaling by GPCR;Signal Transduction;G alpha (s) signalling events;GPCR downstream signalling (Consensus)

Intolerance Scores

• loftool: 0.673
• rvis_EVS: 0.11
• rvis_percentile_EVS: 61.91

Haploinsufficiency Scores

• pHI: 0.0893
• hipred: N
• hipred_score: 0.180
• ghis: 0.424

Essentials

• essential_gene_CRISPR: N
• essential_gene_CRISPR2: N
• essential_gene_gene_trap: N
• gene_indispensability_pred: N
• gene_indispensability_score: 0.197

Gene Damage Prediction

	All	Recessive	Dominant
Mendelian	Medium	Medium	Medium
Primary Immunodeficiency	Medium	Medium	Medium
Cancer	Medium	Medium	Medium

Gene ontology

• Biological process: complement receptor mediated signaling pathway;inflammatory response;G protein-coupled receptor signaling pathway;phospholipase C-activating G protein-coupled receptor signaling pathway;positive regulation of cytosolic calcium ion concentration
• Cellular component: plasma membrane;integral component of plasma membrane
• Molecular function: G protein-coupled receptor activity;N-formyl peptide receptor activity