GeneBe

NR4A1AS

NR4A1 antisense RNA, the group of Long non-coding RNAs with non-systematic symbols

Basic information

Region (hg38): 12:52058459-52059503

Links

ENSG00000259884 ∙ ∙ ∙ HGNC:54409 ∙ ∙ ∙ GenCC ∙ jax ∙ Sfari ∙ GnomAD ∙ Pubmed ∙ ClinVar

Phenotypes

GenCC

Source: genCC

No genCC data.

ClinVar

This is a list of variants' phenotypes submitted to ClinVar and linked to the NR4A1AS gene.

  • Inborn genetic diseases (4 variants)

Variants pathogenicity by type

Statistics on ClinVar variants can assist in determining whether a specific variant type in the NR4A1AS gene is commonly pathogenic or not.

In the table, we include only reliable ClinVar variants with their consequences to MANE Select, Mane Plus Clinical transcripts, or transcripts with TSL equals 1. Click the count to view the source variants.

Warning: slight differences between displayed counts and the number of variants in ClinVar may occur, primarily due to (1) the application of a different transcript and/or consequence by our variant effect predictor or (2) differences in clinical significance: we classify Benign/Likely benign variants as Likely benign and Pathogenic/Likely pathogenic variants as Likely pathogenic.

Variant type Pathogenic Likely pathogenic VUS Likely benign Benign Sum
synonymous
0
missense
0
nonsense
0
start loss
0
frameshift
0
inframe indel
0
splice donor/acceptor (+/-2bp)
0
splice region
0
non coding
4
clinvar
 4
Total 0 0 4 0 0

Variants in NR4A1AS

This is a list of pathogenic ClinVar variants found in the NR4A1AS region.

You can filter this list by clicking the number of variants in the Variants pathogenicity by type table.

Position Type Phenotype Significance ClinVar
12-52058712-G-A not specified Uncertain significance (Oct 20, 2024)3407684
12-52058780-G-A not specified Uncertain significance (Sep 29, 2022)2220870
12-52058802-T-C not specified Uncertain significance (Mar 31, 2024)2386019
12-52058807-C-T not specified Uncertain significance (Jul 26, 2022)2404758
12-52058831-C-G not specified Uncertain significance (Oct 02, 2023)3201962
12-52058835-G-A not specified Uncertain significance (Jun 11, 2021)2351512

GnomAD

Source: gnomAD

dbNSFP

Source: dbNSFP