ZNRD2-DT

ZNRD2 divergent transcript, the group of Divergent transcripts

Basic information

Region (hg38): 11:65563035-65574067

Previous symbols: [ "SSSCA1-AS1", "ZNRD2-AS1" ]

Links

ENSG00000260233 ∙ NCBI:254100 ∙ ∙ HGNC:27384 ∙ ∙ ∙ GenCC ∙ jax ∙ Sfari ∙ GnomAD ∙ Pubmed ∙ ClinVar

Phenotypes

GenCC

Source: genCC

No genCC data.

ClinVar

This is a list of variants' phenotypes submitted to ClinVar and linked to the ZNRD2-DT gene.

Variants pathogenicity by type

Statistics on ClinVar variants can assist in determining whether a specific variant type in the ZNRD2-DT gene is commonly pathogenic or not.

In the table, we include only reliable ClinVar variants with their consequences to MANE Select, Mane Plus Clinical transcripts, or transcripts with TSL equals 1. Click the count to view the source variants.

Warning: slight differences between displayed counts and the number of variants in ClinVar may occur, primarily due to (1) the application of a different transcript and/or consequence by our variant effect predictor or (2) differences in clinical significance: we classify Benign/Likely benign variants as Likely benign and Pathogenic/Likely pathogenic variants as Likely pathogenic.

Variant type	Pathogenic	Likely pathogenic	VUS	Likely benign	Benign	Sum
synonymous						0
missense						0
nonsense						0
start loss						0
frameshift						0
inframe indel						0
splice donor/acceptor (+/-2bp)						0
splice region						0
non coding						0
Total	0	0	0	0	0

Variants in ZNRD2-DT

This is a list of pathogenic ClinVar variants found in the ZNRD2-DT region.

You can filter this list by clicking the number of variants in the Variants pathogenicity by type table.

Position	Type	Phenotype	Significance	ClinVar
11-65570495-G-T		not specified	Uncertain significance (Nov 07, 2022)
11-65570504-G-A		not specified	Uncertain significance (Feb 16, 2023)
11-65570520-T-C			Benign (Feb 25, 2018)
11-65570646-C-T			Benign (Dec 31, 2019)
11-65571396-A-C		not specified	Uncertain significance (Nov 21, 2023)
11-65571496-G-T		not specified	Uncertain significance (Apr 12, 2023)
11-65571504-C-T		not specified	Uncertain significance (Apr 12, 2023)
11-65571538-C-T		not specified	Uncertain significance (Sep 14, 2023)
11-65571558-G-C		not specified	Uncertain significance (Oct 25, 2022)
11-65571633-G-C		not specified	Uncertain significance (Jun 16, 2024)
11-65571712-G-T		not specified	Uncertain significance (Oct 26, 2022)
11-65572676-G-A		not specified	Uncertain significance (Aug 08, 2022)
11-65572772-G-T		not specified	Uncertain significance (Jun 24, 2022)
11-65572874-G-T		not specified	Uncertain significance (Jan 26, 2023)
11-65572881-C-T		not specified	Uncertain significance (Jul 14, 2021)
11-65572902-C-T		not specified	Uncertain significance (Mar 08, 2024)
11-65572916-C-T		not specified	Uncertain significance (Jun 09, 2022)
11-65573462-T-C		not specified	Uncertain significance (May 04, 2023)
11-65573479-C-T		not specified	Likely benign (Mar 01, 2024)
11-65573515-G-A		not specified	Likely benign (Jun 21, 2023)
11-65573543-G-A		not specified	Uncertain significance (Jun 21, 2022)
11-65573604-A-C		not specified	Uncertain significance (Oct 05, 2021)

GnomAD

Source: gnomAD

dbNSFP

Source: dbNSFP