GeneBe

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Databases

alfa

Aggregated allele frequency from dbGaP and dbSNP

By: @genebe | Species: homo_sapiens | Genome: GRCh38 | Version: 0.0.1-20231103111315

alpha-missense

Title of alpha-missense

By: @genebe | Species: homo_sapiens | Genome: GRCh38 | Version: 0.0.1

bayesdel_noaf

BayesDel noAF

By: @genebe | Species: homo_sapiens | Genome: GRCh38 | Version: 0.0.1

cadd_hg19

CADD is a tool for scoring the deleteriousness

By: @genebe | Species: homo_sapiens | Genome: GRCh37 | Version: 0.0.2-1.7.0

cadd_hg38

CADD is a tool for scoring the deleteriousness

By: @genebe | Species: homo_sapiens | Genome: GRCh38 | Version: 0.0.2-1.7.0

cardioboost-arrhythmias-hg19

CardioBoost Arrhythmias

By: @genebe | Species: homo_sapiens | Genome: GRCh37 | Version: 0.0.1

cardioboost-arrhythmias-hg38

CardioBoost Arrhythmias

By: @genebe | Species: homo_sapiens | Genome: GRCh38 | Version: 0.0.1

cardioboost-cardiomyopathies-hg19

CardioBoost Cardiomyopathies

By: @genebe | Species: homo_sapiens | Genome: GRCh37 | Version: 0.0.1

cardioboost-cardiomyopathies-hg38

CardioBoost Cardiomyopathies

By: @genebe | Species: homo_sapiens | Genome: GRCh38 | Version: 0.0.1

ccrs_hg19

Title of ccrs_hg19

By: @genebe | Species: homo_sapiens | Genome: GRCh37 | Version: 0.0.1

ccrs_hg38

Title of ccrs_hg38

By: @genebe | Species: homo_sapiens | Genome: GRCh38 | Version: 0.0.1

clinvar

A Public Database of Genetic Variants

By: @genebe | Species: tmptable | Genome: homo_sapies | Version: 0.0.2-20250323

cosmic-genomescreensmutant-hg19

COSMIC v101 GenomeScreensMutant GRCh37

By: @genebe | Species: homo_sapiens | Genome: GRCh37 | Version: 0.0.1-101

cosmic-genomescreensmutant-hg38

COSMIC v101 GenomeScreensMutant GRCh38

By: @genebe | Species: homo_sapiens | Genome: GRCh38 | Version: 0.0.1-101

cosmic-noncodingvariants-hg19

COSMIC v101 NonCodingVariants GRCh37

By: @genebe | Species: homo_sapiens | Genome: GRCh37 | Version: 0.0.1-101

cosmic-noncodingvariants-hg38

COSMIC v101 NonCodingVariants GRCh38

By: @genebe | Species: homo_sapiens | Genome: GRCh38 | Version: 0.0.1-101

dann_hg19

DANN: Deep Learning-Based Variant Annotation Database

By: @genebe | Species: homo_sapiens | Genome: GRCh37 | Version: 0.0.1

dann_hg38

DANN: Deep Learning-Based Variant Annotation Database, GRCh38 version

By: @genebe | Species: homo_sapiens | Genome: GRCh38 | Version: 0.0.1

dbscsnv-hg19

dbscSNV1.1 hg19

By: @genebe | Species: homo_sapiens | Genome: GRCh37 | Version: 0.0.1-1.1

dbscsnv-hg38

dbscSNV1.1 hg38

By: @genebe | Species: homo_sapiens | Genome: GRCh38 | Version: 0.0.1-1.1

dbsnp

dbSNP

By: @genebe | Species: homo_sapies | Genome: GRCh38 | Version: 0.0.1-157

dbsnp_hg19

The Single Nucleotide Polymorphism Database, hg19

By: @genebe | Species: homo_sapiens | Genome: GRCh37 | Version: 0.0.1-156

gnomad-exomes-depth

Depth of the GnomAD Exomes

By: @genebe | Species: homo_sapiens | Genome: GRCh38 | Version: 0.0.1-4.1.0

gnomad-exomes2

Genome Aggregation Database Exomes 2.1.1, GRCh37,

By: @genebe | Species: homo_sapies | Genome: GRCh37 | Version: 0.0.1-2.1.1

gnomad-exomes4

Genome Aggregation Database Exomes 4.1.0, GRCh38,

By: @genebe | Species: homo_sapies | Genome: GRCh38 | Version: 0.0.1-4.1.0

gnomad-genomes2

Genome Aggregation Database Genomes 2.1.1, GRCh37,

By: @genebe | Species: homo_sapies | Genome: GRCh37 | Version: 0.0.1-2.1.1

gnomad-genomes4

Genome Aggregation Database Genomes 4.1.0, GRCh38,

By: @genebe | Species: homo_sapies | Genome: GRCh38 | Version: 0.0.1-4.1.0

gnomad2-exomes-hg19

GnomAD Exomes hg19, v. 2.1.1 - Genome Aggregation Database

By: @genebe | Species: homo_sapiens | Genome: GRCh37 | Version: 0.0.1-2.1.1

gnomad2-genomes-hg19

GnomAD Genomes hg19, v. 2 - Genome Aggregation Database

By: @genebe | Species: homo_sapiens | Genome: GRCh37 | Version: 0.0.1-2.0.0

gnomad3-genomes-depth

Depth of the GnomAD3 Genomes

By: @genebe | Species: homo_sapiens | Genome: GRCh38 | Version: 0.0.1-3.0.1

gnomad3-mito

GnomAD Mitochondrial data

By: @genebe | Species: homo_sapiens | Genome: GRCh38 | Version: 0.0.1-3.1.2

gpn-msa

GPN-MSA - genomic pretrained network with multiple-sequence alignment

By: @genebe | Species: homo_sapiens | Genome: GRCh38 | Version: 0.0.1

helixmtdb

HelixMtDB

By: @genebe | Species: homo_sapiens | Genome: GRCh38 | Version: 0.0.1

mitomap-disease

Mitomap Disease

By: @genebe | Species: homo_sapiens | Genome: GRCh38 | Version: 0.0.1-20250303

mitomap-polymorphisms

Mitomap Polymorphisms

By: @genebe | Species: homo_sapiens | Genome: GRCh38 | Version: 0.0.1-20250303

mutation-taster

Precomputed MutationTaster 2021 Annotations for Genetic Variant Interpretation

By: @genebe | Species: homo_sapiens | Genome: GRCh37 | Version: 0.0.1-20250217

mutsplicedb-hg38

MutSpliceDB HG38

By: @genebe | Species: homo_sapiens | Genome: GRCh38 | Version: 0.0.1-20250326

phastcons100_hg19

phastCons100

By: @genebe | Species: homo_sapies | Genome: GRCh37 | Version: 0.0.1

phastcons100_hg38

phastCons100

By: @genebe | Species: homo_sapies | Genome: GRCh38 | Version: 0.0.1

phylop100_hg19

phylop100

By: @genebe | Species: homo_sapies | Genome: GRCh37 | Version: 0.0.1

phylop100_hg38

phylop100

By: @genebe | Species: homo_sapies | Genome: GRCh38 | Version: 0.0.1

revel

REVEL - Rare Exome Variant Ensemble Learner

By: @genebe | Species: homo_sapiens | Genome: GRCh38 | Version: 0.0.1

revel_hg19

REVEL hg19

By: @genebe | Species: homo_sapiens | Genome: GRCh37 | Version: 0.0.1

spliceai

SOTA Splicing Variants impact predictions

By: @genebe | Species: homo_sapiens | Genome: GRCh38 | Version: 0.0.1

topmed

Topmed

By: @genebe | Species: homo_sapiens | Genome: GRCh38 | Version: 0.0.1-freeze.8

varity

Improved pathogenicity prediction for rare human missense variants

By: @genebe | Species: homo_sapiens | Genome: GRCh38 | Version: 0.0.1