7-21901132-G-C
Variant summary
Our verdict is Uncertain significance. Variant got 1 ACMG points: 2P and 1B. PM2BP4
The NM_001277115.2(DNAH11):āc.13429G>Cā(p.Glu4477Gln) variant causes a missense change. The variant allele was found at a frequency of 0.00000479 in 1,461,216 control chromosomes in the GnomAD database, with no homozygous occurrence. In-silico tool predicts a benign outcome for this variant. 11/18 in silico tools predict a benign outcome for this variant. No clinical diagnostic laboratories have submitted clinical-significance assessments for this variant to ClinVar. Another variant affecting the same amino acid position, but resulting in a different missense (i.e. E4477K) has been classified as Uncertain significance.
Frequency
Consequence
NM_001277115.2 missense
Scores
Clinical Significance
Conservation
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ACMG classification
Verdict is Uncertain_significance. Variant got 1 ACMG points.
Transcripts
RefSeq
Gene | Transcript | HGVSc | HGVSp | Effect | #exon/exons | MANE | UniProt |
---|---|---|---|---|---|---|---|
DNAH11 | NM_001277115.2 | c.13429G>C | p.Glu4477Gln | missense_variant | 82/82 | ENST00000409508.8 | |
CDCA7L | NM_018719.5 | c.*1190C>G | 3_prime_UTR_variant | 10/10 | ENST00000406877.8 | ||
CDCA7L | NM_001127370.3 | c.*1190C>G | 3_prime_UTR_variant | 11/11 | |||
CDCA7L | NM_001127371.3 | c.*1190C>G | 3_prime_UTR_variant | 9/9 |
Ensembl
Gene | Transcript | HGVSc | HGVSp | Effect | #exon/exons | TSL | MANE | Appris | UniProt |
---|---|---|---|---|---|---|---|---|---|
DNAH11 | ENST00000409508.8 | c.13429G>C | p.Glu4477Gln | missense_variant | 82/82 | 5 | NM_001277115.2 | P1 | |
CDCA7L | ENST00000406877.8 | c.*1190C>G | 3_prime_UTR_variant | 10/10 | 1 | NM_018719.5 | P1 |
Frequencies
GnomAD3 genomes Cov.: 33
GnomAD3 exomes AF: 0.00000402 AC: 1AN: 248632Hom.: 0 AF XY: 0.00000741 AC XY: 1AN XY: 134968
GnomAD4 exome AF: 0.00000479 AC: 7AN: 1461216Hom.: 0 Cov.: 33 AF XY: 0.00000413 AC XY: 3AN XY: 726890
GnomAD4 genome Cov.: 33
ClinVar
Not reported inComputational scores
Source:
Splicing
Find out detailed SpliceAI scores and Pangolin per-transcript scores at