BET1-AS1

BET1 antisense RNA 1, the group of Antisense RNAs

Basic information

Region (hg38): 7:93969438-94066804

Links

ENSG00000236861

∙ NCBI:105375403 ∙ ∙ HGNC:40690 ∙ ∙ ∙ GenCC ∙ jax ∙ Sfari ∙ GnomAD ∙ Pubmed ∙ ClinVar

Phenotypes

GenCC

Source: genCC

No genCC data.

ClinVar

This is a list of variants' phenotypes submitted to ClinVar and linked to the BET1-AS1 gene.

Progressive muscle weakness;Seizure (2 variants)
Inborn genetic diseases (2 variants)
not provided (1 variants)

Variants pathogenicity by type

Statistics on ClinVar variants can assist in determining whether a specific variant type in the BET1-AS1 gene is commonly pathogenic or not.

In the table, we include only reliable ClinVar variants with their consequences to MANE Select, Mane Plus Clinical transcripts, or transcripts with TSL equals 1. Click the count to view the source variants.

Warning: slight differences between displayed counts and the number of variants in ClinVar may occur, primarily due to (1) the application of a different transcript and/or consequence by our variant effect predictor or (2) differences in clinical significance: we classify Benign/Likely benign variants as Likely benign and Pathogenic/Likely pathogenic variants as Likely pathogenic.

Variant type	Pathogenic	Likely pathogenic	VUS	Likely benign	Benign	Sum
synonymous						0
missense						0
nonsense						0
start loss						0
frameshift						0
inframe indel						0
splice donor/acceptor (+/-2bp)						0
splice region						0
non coding			5 clinvar			5
Total	0	0	5	0	0

Variants in BET1-AS1

This is a list of pathogenic ClinVar variants found in the BET1-AS1 region.

You can filter this list by clicking the number of variants in the Variants pathogenicity by type table.

Position	Phenotype	Significance	ClinVar
7-93994306-G-T	not specified	Uncertain significance (Oct 30, 2023)	3133746
7-93994308-T-A	not specified	Uncertain significance (Jul 14, 2023)	2612002
7-93994385-C-G	Progressive muscle weakness;Seizure • Muscular dystrophy, congenital, with rapid progression	Uncertain significance (Feb 25, 2019)	619194
7-93996314-A-C	Muscular dystrophy, congenital, with rapid progression	Uncertain significance (Aug 28, 2020)	977650
7-93999179-AG-A	Progressive muscle weakness;Seizure • Muscular dystrophy, congenital, with rapid progression	Uncertain significance (Feb 25, 2019)	619186
7-93999198-A-C	not specified	Uncertain significance (Jun 12, 2023)	2559572

GnomAD

Source: gnomAD

dbNSFP

Source: dbNSFP