GPR50-AS1
Basic information
Region (hg38): X:151175175-151177836
Links
Phenotypes
GenCC
Source:
ClinVar
This is a list of variants' phenotypes submitted to
- Inborn genetic diseases (6 variants)
- not provided (1 variants)
Variants pathogenicity by type
Statistics on ClinVar variants can assist in determining whether a specific variant type in the GPR50-AS1 gene is commonly pathogenic or not.
In the table, we include only reliable ClinVar variants with their consequences to MANE Select, Mane Plus Clinical transcripts, or transcripts with TSL equals 1. Click the count to view the source variants.
Warning: slight differences between displayed counts and the number of variants in ClinVar may occur, primarily due to (1) the application of a different transcript and/or consequence by our variant effect predictor or (2) differences in clinical significance: we classify Benign/Likely benign variants as Likely benign and Pathogenic/Likely pathogenic variants as Likely pathogenic.
Variant type | Pathogenic | Likely pathogenic | VUS | Likely benign | Benign | Sum |
---|---|---|---|---|---|---|
synonymous | 0 | |||||
missense | 0 | |||||
nonsense | 0 | |||||
start loss | 0 | |||||
frameshift | 0 | |||||
inframe indel | 0 | |||||
splice donor/acceptor (+/-2bp) | 0 | |||||
splice region | 0 | |||||
non coding | 7 | |||||
Total | 0 | 0 | 6 | 1 | 0 |
Variants in GPR50-AS1
This is a list of pathogenic ClinVar variants found in the GPR50-AS1 region.
You can filter this list by clicking the number of variants in the Variants pathogenicity by type table.
Position | Type | Phenotype | Significance | ClinVar |
---|---|---|---|---|
X-151176738-C-T | not specified | Uncertain significance (Jun 23, 2023) | ||
X-151176776-C-T | not specified | Uncertain significance (Sep 16, 2021) | ||
X-151176782-C-G | not specified | Uncertain significance (Dec 21, 2023) | ||
X-151176813-T-C | not specified | Uncertain significance (Feb 16, 2023) | ||
X-151176819-G-C | not specified | Uncertain significance (Jun 23, 2023) | ||
X-151176866-G-T | not specified | Uncertain significance (Mar 18, 2024) | ||
X-151176889-C-G | not specified | Uncertain significance (Mar 21, 2023) | ||
X-151176899-C-T | Likely benign (Feb 01, 2023) | |||
X-151176900-G-A | not specified | Uncertain significance (Mar 17, 2023) |
GnomAD
Source:
dbNSFP
Source: