MIR6890

microRNA 6890, the group of MicroRNAs

Basic information

Region (hg38): 3:49099854-49099914

Links

ENSG00000284488 ∙ NCBI:102465536 ∙ ∙ HGNC:49990 ∙ ∙ ∙ GenCC ∙ jax ∙ Sfari ∙ GnomAD ∙ Pubmed ∙ ClinVar

Phenotypes

GenCC

Source: genCC

No genCC data.

ClinVar

This is a list of variants' phenotypes submitted to ClinVar and linked to the MIR6890 gene.

Variants pathogenicity by type

Statistics on ClinVar variants can assist in determining whether a specific variant type in the MIR6890 gene is commonly pathogenic or not.

In the table, we include only reliable ClinVar variants with their consequences to MANE Select, Mane Plus Clinical transcripts, or transcripts with TSL equals 1. Click the count to view the source variants.

Warning: slight differences between displayed counts and the number of variants in ClinVar may occur, primarily due to (1) the application of a different transcript and/or consequence by our variant effect predictor or (2) differences in clinical significance: we classify Benign/Likely benign variants as Likely benign and Pathogenic/Likely pathogenic variants as Likely pathogenic.

Variant type	Pathogenic	Likely pathogenic	VUS	Likely benign	Benign	Sum
synonymous						0
missense						0
nonsense						0
start loss						0
frameshift						0
inframe indel						0
splice donor/acceptor (+/-2bp)						0
splice region						0
non coding						0
Total	0	0	0	0	0

Variants in MIR6890

This is a list of pathogenic ClinVar variants found in the MIR6890 region.

You can filter this list by clicking the number of variants in the Variants pathogenicity by type table.

Position	Type	Phenotype	Significance	ClinVar
3-49099858-G-A		Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome	Likely benign (May 15, 2024)
3-49099864-T-C		Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome	Likely benign (Aug 31, 2022)
3-49099867-G-A		Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome	Likely benign (Apr 23, 2022)
3-49099869-A-G		Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome	Likely benign (Apr 22, 2024)
3-49099872-G-A		Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome	Likely benign (Jun 24, 2024)
3-49099872-G-C		Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome	Likely benign (Nov 11, 2024)
3-49099873-G-C		Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome	Likely benign (Oct 16, 2024)

GnomAD

Source: gnomAD

dbNSFP

Source: dbNSFP