NCAM1-AS1

NCAM1 antisense RNA1, the group of Antisense RNAs

Basic information

Region (hg38): 11:113265137-113274032

Links

ENSG00000227487

∙ NCBI:100288346 ∙ ∙ HGNC:48675 ∙ ∙ ∙ GenCC ∙ jax ∙ Sfari ∙ GnomAD ∙ Pubmed ∙ ClinVar

Phenotypes

GenCC

Source: genCC

No genCC data.

ClinVar

This is a list of variants' phenotypes submitted to ClinVar and linked to the NCAM1-AS1 gene.

Inborn genetic diseases (3 variants)
not provided (1 variants)

Variants pathogenicity by type

Statistics on ClinVar variants can assist in determining whether a specific variant type in the NCAM1-AS1 gene is commonly pathogenic or not.

In the table, we include only reliable ClinVar variants with their consequences to MANE Select, Mane Plus Clinical transcripts, or transcripts with TSL equals 1. Click the count to view the source variants.

Warning: slight differences between displayed counts and the number of variants in ClinVar may occur, primarily due to (1) the application of a different transcript and/or consequence by our variant effect predictor or (2) differences in clinical significance: we classify Benign/Likely benign variants as Likely benign and Pathogenic/Likely pathogenic variants as Likely pathogenic.

Variant type	Pathogenic	Likely pathogenic	VUS	Likely benign	Benign	Sum
synonymous						0
missense						0
nonsense						0
start loss						0
frameshift						0
inframe indel						0
splice donor/acceptor (+/-2bp)						0
splice region						0
non coding			3 clinvar	1 clinvar		4
Total	0	0	3	1	0

Variants in NCAM1-AS1

This is a list of pathogenic ClinVar variants found in the NCAM1-AS1 region.

You can filter this list by clicking the number of variants in the Variants pathogenicity by type table.

Position	Phenotype	Significance	ClinVar
11-113270221-G-A	not specified	Uncertain significance (Dec 08, 2023)	3180220
11-113270223-G-C	not specified	Uncertain significance (May 27, 2022)	2343877
11-113270274-G-T	not specified	Uncertain significance (Sep 26, 2023)	3180229
11-113270325-G-A	not specified	Uncertain significance (Mar 16, 2022)	2391632
11-113271800-G-A	not specified	Uncertain significance (Jun 24, 2022)	2386353
11-113271850-C-T		Likely benign (Jul 01, 2022)	2642376

GnomAD

Source: gnomAD

dbNSFP

Source: dbNSFP