OR8B3

olfactory receptor family 8 subfamily B member 3, the group of Olfactory receptors, family 8

Basic information

Region (hg38): 11:124395534-124399024

Links

ENSG00000284609 ∙ NCBI:390271 ∙ ∙ HGNC:8472 ∙ Uniprot:Q8NGG8 ∙ AlphaFold ∙ GenCC ∙ jax ∙ Sfari ∙ GnomAD ∙ Pubmed ∙ ClinVar

Phenotypes

GenCC

Source: genCC

No genCC data.

ClinVar

This is a list of variants' phenotypes submitted to ClinVar and linked to the OR8B3 gene.

Variants pathogenicity by type

Statistics on ClinVar variants can assist in determining whether a specific variant type in the OR8B3 gene is commonly pathogenic or not.

In the table, we include only reliable ClinVar variants with their consequences to MANE Select, Mane Plus Clinical transcripts, or transcripts with TSL equals 1. Click the count to view the source variants.

Warning: slight differences between displayed counts and the number of variants in ClinVar may occur, primarily due to (1) the application of a different transcript and/or consequence by our variant effect predictor or (2) differences in clinical significance: we classify Benign/Likely benign variants as Likely benign and Pathogenic/Likely pathogenic variants as Likely pathogenic.

Variant type	Pathogenic	Likely pathogenic	VUS	Likely benign	Benign	Sum
synonymous						0
missense			14	2		16
nonsense						0
start loss						0
frameshift						0
inframe indel						0
splice donor/acceptor (+/-2bp)						0
splice region						0
non coding						0
Total	0	0	14	2	0

Variants in OR8B3

This is a list of pathogenic ClinVar variants found in the OR8B3 region.

You can filter this list by clicking the number of variants in the Variants pathogenicity by type table.

Position	Type	Phenotype	Significance	ClinVar
11-124396457-C-G		not specified	Uncertain significance (May 31, 2023)
11-124396510-A-C		not specified	Likely benign (Oct 20, 2023)
11-124396524-G-C		not specified	Uncertain significance (Dec 06, 2021)
11-124396534-G-A		not specified	Uncertain significance (Dec 17, 2021)
11-124396537-A-C		not specified	Uncertain significance (Dec 01, 2022)
11-124396550-C-G		not specified	Uncertain significance (Apr 26, 2023)
11-124396642-G-A		not specified	Uncertain significance (Sep 13, 2023)
11-124396729-A-T		not specified	Uncertain significance (Dec 21, 2022)
11-124396745-C-T		not specified	Uncertain significance (Oct 26, 2021)
11-124396840-G-A		not specified	Likely benign (Mar 28, 2024)
11-124396864-A-G		not specified	Uncertain significance (Mar 20, 2023)
11-124396882-G-A		not specified	Uncertain significance (May 17, 2023)
11-124396958-A-G		not specified	Uncertain significance (Jan 03, 2022)
11-124396987-C-T		not specified	Uncertain significance (Apr 15, 2024)
11-124397053-T-C		not specified	Uncertain significance (Mar 03, 2022)
11-124397063-A-G		not specified	Uncertain significance (Apr 17, 2023)
11-124397085-C-G		not specified	Likely benign (May 30, 2024)
11-124397203-C-A		not specified	Uncertain significance (May 26, 2024)
11-124397204-C-T		not specified	Likely benign (Jan 24, 2024)
11-124397273-G-C		not specified	Uncertain significance (Jan 04, 2024)

GnomAD

Source: gnomAD

dbNSFP

Source: dbNSFP

• Function: FUNCTION: Odorant receptor. {ECO:0000305}.
• Pathway: Olfactory transduction - Homo sapiens (human);Signaling by GPCR;Signal Transduction;Olfactory Signaling Pathway;G alpha (s) signalling events;GPCR downstream signalling (Consensus)

Recessive Scores

• pRec: 0.0839

Intolerance Scores

• loftool: 0.805
• rvis_EVS: 0.28
• rvis_percentile_EVS: 71.41

Haploinsufficiency Scores

• pHI: 0.0691
• hipred: N
• hipred_score: 0.255

Essentials

• essential_gene_gene_trap: N
• gene_indispensability_pred: N
• gene_indispensability_score: 0.00583

Gene Damage Prediction

	All	Recessive	Dominant
Mendelian	Medium	Medium	Medium
Primary Immunodeficiency	Medium	Medium	Medium
Cancer	Medium	Medium	Medium

Mouse Genome Informatics

• Gene name: Olfr147

Gene ontology

• Biological process: G protein-coupled receptor signaling pathway;sensory perception of smell;detection of chemical stimulus involved in sensory perception of smell
• Cellular component: plasma membrane;integral component of membrane
• Molecular function: G protein-coupled receptor activity;olfactory receptor activity;odorant binding