PPP1R12A-AS2

PPP1R12A antisense RNA 2, the group of Antisense RNAs

Basic information

Region (hg38): 12:79690144-79778451

Links

ENSG00000258048 ∙ NCBI:105369864 ∙ ∙ HGNC:55456 ∙ ∙ ∙ GenCC ∙ jax ∙ Sfari ∙ GnomAD ∙ Pubmed ∙ ClinVar

Phenotypes

GenCC

Source: genCC

No genCC data.

ClinVar

This is a list of variants' phenotypes submitted to ClinVar and linked to the PPP1R12A-AS2 gene.

• Inborn genetic diseases (2 variants)
• PPP1R12A-related condition (1 variants)
• Gestational diabetes mellitus uncontrolled (1 variants)
• not provided (1 variants)

Variants pathogenicity by type

Statistics on ClinVar variants can assist in determining whether a specific variant type in the PPP1R12A-AS2 gene is commonly pathogenic or not.

In the table, we include only reliable ClinVar variants with their consequences to MANE Select, Mane Plus Clinical transcripts, or transcripts with TSL equals 1. Click the count to view the source variants.

Warning: slight differences between displayed counts and the number of variants in ClinVar may occur, primarily due to (1) the application of a different transcript and/or consequence by our variant effect predictor or (2) differences in clinical significance: we classify Benign/Likely benign variants as Likely benign and Pathogenic/Likely pathogenic variants as Likely pathogenic.

Variant type	Pathogenic	Likely pathogenic	VUS	Likely benign	Benign	Sum
synonymous						0
missense						0
nonsense						0
start loss						0
frameshift						0
inframe indel						0
splice donor/acceptor (+/-2bp)						0
splice region						0
non coding			4			4
Total	0	0	4	0	0

Variants in PPP1R12A-AS2

This is a list of pathogenic ClinVar variants found in the PPP1R12A-AS2 region.

You can filter this list by clicking the number of variants in the Variants pathogenicity by type table.

Position	Type	Phenotype	Significance	ClinVar
12-79690184-C-G		not specified	Uncertain significance (Sep 01, 2021)
12-79690240-G-A		not specified	Uncertain significance (Feb 10, 2022)
12-79761819-T-TACATTTTTGTAAGTATGTAGAAATGCAAGTGATTTTTGAATTTGACCTTGTATCCTGAGACCTTGATAAATTCATTCTTAGTTCTAGTAGTTGCTTTGTGGATTCCTTAGGATTTTTTGTGCAGACAATATGTCAGCTGAAAATACAGTTATACTTTTTCCTTTCAGATATTTATTTTTTGTTTTTTCTTAATACACTAGCTAGGACTGCCAACACCACGCTGAATGGAATGAGTAAGGGACTAAGAGGGGACCATCCGTTACTTGTTTCTGATCTTAGGAAGAAAGCATTTAATATTTCACCATTATGTTGGGTGTAGGTTTTTAATGGAGGGCCATTATCAGATTGAGAAAGTTTTTTATATTTCTAGTTTGCCGAGAGTTTTACATTATGAGTGGGTATTATAGCTGTTAAATGCTTTTTCTGGGCCTATTGAAATGCTCATATTTTATTTCCTTTACTATGTTAATATGAATTACATTGATTATCAAATGTTAAACCAACCTCTCAATTCTAGTATAAACCACATTTAATTATGATGATTTATCCTTTTTATATATTGGTTAATAGTGTTGAAGACTTTTGCATTTATGTTATTGAGGGATATTGGTTTGTAATTTTCTTGTAATGTCTCCATTAGGTCTTGGTATCAGGCTAATGCTGACCTTACAAAATGAACTGGGAAGTTCTGCCTCCTCCTTCATTTTTTGAAGAGTTTGCATGTAAAATGTTTTATTTCTTCCTTAATTTTGGGTAGAATTCAATATAGAAACCATCTAGACCTTTAGTTTTCTGTGAATCACAGCTATTTTAAAGTTTGTTTCTGATAAAACAGTTGTACTGTCACCTTGGACAAGCTGCAACTACATTTCTTTTTTTTTTTTGAGATGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTACAGTGGCACGATGTCGGCTCACTGCAAGCTCCACCTCCCGGGTTCACACCATTCTCCTGCCTCAATCTCCTGAGTAGCTGGGACCACAGGTGCCTGCCACCACACCCGGCAAATCTTTTTTTTTTTTTTTTTTTTTTTTTAGTAGAGATGGGGTTTCACCATGTTAGCCAGGATGGTCTTGATCTCCTGACCTCGTGATCTGCCCACCTCGGCCTCCCAAAGTGCTGGGATTATAGGCTTGAGCCACCGCGCCCGGGCCAAGCTGCAACTACATTTCAAAGAATCTCATTCCCTGTTTAGTTCTGGATTAGTTGGCCAAAATCAAAATATGCATGAGATTTGGAAGGTAGAGTGAAATAGTAGCTAATATACTCTGATGGTCTTTGTGGTGAGAAGTGGTGAGATACAACTGCAGAGGTGCTGGTGGGTTCCAATCTGTCCTTGTACTTCCCTGCTCCATGTCCAACTTTTATTTCTAACTGCAGACCCTGTTGACCAATTATGACCCAAGACTCACTACCAAATGAAGTGACAGTATCTTCAAACAACTCTTCCAGCTTTCTTTTGCAGGCTCACTTCAGCAACTGGATATGCCTGGCTTCTCAATTTCCCTGACAAGCTCCAATTTGGCCAACTATACCTGTGCTTCAGAAGGGCTGGTTCATGACTTTTCTCTTATCCACCAGCTCACCCTTTCAGATCCTTACTTCTTCAGTTTCTTCCACAATTGTGTCAAATCTGTTGCTATAAATTCCTTATTTCATAATACTCACACTGGTTCTGCTTCCCTGATTGAACTTTAATAGAGATAACTAAAAAATTAAAATTTTCTATGGGTCTGTTTTAATTATCCTTTTTCCTTTCTGTTTTTACAGTCAGTTGGTTTTATCTCCTTGAATGCCTTGTCATTTTTTGATTGAATGCTGGACACTTTGTATCCAAATTTTAATAATTTTAGGGTCTGGATGATGCTATCTTCTTCCAAAATGATGGACTTTAACATCCAGCAGTGAGTTAGGGTAAGAACAGATCGTCTTAATCTTGTTCAGGATTGAGCAATTTCAGACTTTGTGATGGCTTACTTATTTTGGGTTTATGCTTTTCTTTTAGGGAATAGCCCTTCAAGGATCCCCACTTAAAAAAAAAAAAAAGCTGGTATTTAATGCAGTTCCTCCCCTTTGGCAGGCCATGAACTGAATGTTCTGAATCCCCCACCCTGTGTGAGTGATAATACAGCTGCTCAGTTTTTCAGTCTCTTGGCCACTAGTTATAAATTGTCTTTGGGGAAAAGTGGTGCTGAATGTGTGGTTCACTTTTTTTGTGCTCCTCTTCTTTTTAGGATCCTGGTCCCGCAAGGCCTTGCTGCAAAACATTGGAAAAAATTATCTATATTAAACCCAGTTATTTCCCTCTCATTCTCATCCAAACAGGATTTCACCCCCATCACTGTAGTTAAATTGCTCGTATTGCAATATCCAGTTGACAGTTCTCAGTCCTTATCTGGTAACAGCAATCATTGCTTCCTAGAAACATTTTCTTCACTCTCTAGGGCCTCAGTCTTCTTATTTTATTCCTATTTCATTGGCCAACCTTCATTATTTTTTGTTGGGTTCCTGTCTTCCTGATCTCTTAACATTAGACGACCCAGGCCCCAATCCTGGGACTTTTTTTTTTTTTTTTTTCTTTTTGAGATGGGGTCTCACTCTGTCGCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAACCTCTACCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAAGTGTGCACCACCACGCCCAGCTAATTTTTGTATTTTTAGTAAAGACAGGGTTTCACCATGTTGGCCAGGATGGTCTCGATCTCTTGACCCCGTGATCCACCCACCTTGGCCTCCCAAAGTGCTGGCATTACAGGCATGAGCCACCGTGCCCAGCCCTTTACTCTCATTCAGTCTCATGAATTTCCCTATCAGGCATATGCTCAGGCTCCCAGATTTCTATCTCTGGCTTCTCTCTTCTGAACTCAACATTTTGACTTGGATGTTTAACAAATATTCACACTGATAAGCATCTCAAACTTAACATGTCCAAAACATAACTTCATACTTTCTACCACAAACTTGTTCTACTGTCTTCTAAGCTAATTGCAATTCCATCCTTCTAGTTACTAGGGCTATAATCCTGAACTCTCCTACTTCAAATCCAATCGTGTGGGCTCTACCTTCAAAATAGATTTAGAATCCTACCACTTCTCAGCACCTTCACTGTTATCTCCCTGGGCCAAGACACTGTTATCTCCCATATGGATTGCAGTAATAGTGTCCTAAGTAGTCTAAGGGAGATTCCTTAAAAACCTAAGTCAGATTATATTATTTTCTCAAATCCTTCAAATGGCTTCCAGTCTCAGATTAAAAACTTCAAGTACTTACGATGGTTTATAAGACCATACATAATCTTGCCTCCAAATATTCTTCTGGCCTCATCTCTCATACACTTGTCCTTGTTTACTTGGCTTCAGCCACATTGGCTTTCTTGCTATTTCTTAAAAATGCTTCTGCCCCCTGCCTTTGGGCATGCTGTTCCAAACAGACATAGTTGGAATGCTTTTTCCCAGAAATCTTGATGGATCACACTACCATTTCCTTCAGTCATATCAGTGATGCTTTCCTTAACCTATTTAAAACCAAAACCCTCCTCCCTAATATGCCCTTCCCCAACATTCCTTAGGCTTTTTCTTATCCCTACTTTTTCTCCAAGGACTTGTAATTCTCCCTATATTTTTTCTGCCTACATCCAATAGCATATAAGCTTCATTATGGTGGAGTTTTGTCAATTTTGTTCACTGCTTTATCCCTCGCACCTAGAGTAGCACCTGACACATAGTAGCACTCAATATTTGAATAACTCATCAATTTTCAATGGATTCTGATTAAATTTACAAGTCAATTCTAAACAAGCGGTGACATTTCAAGGTTTAAACTTCAGTGATCAGGTTCCTTTTAGGTGATATTCCTGTCATTGATTTTTTGCTTGCTTTTTGTCCTTCTTCTGGTTATAGCCCCCTTCTTTTTTGGGGGGGACTGTACATCCTTTATATCTTCTGGCAATGCTGCTAACCATAAAACTTTACATCTCCCTTGCTTTGAGTGGTAAATAGAAACCCAGGACTGATCAATCAGTACTCCATCTCCATGGAAAAACAGATTAGTTCAAGGGATTAAAATAGCTCATTTCCTGGGATTTCATATATTAGGTGTTGGGATAAGAAATTACTTCTTTCCTCTGCGGTTGTTAGTCATTCATAGTCCTAAGTTTTCTCCATTTTAGTAGGACAGATGAGGTCACTGCACAGAAGAGAAGAGAGGTGACACCCGATGGATTCTGTCTTGTCTAAGGACAGCTAGACCTCTGAACTTCCTGGTAACTTGAGCCAATATATTTTATCTATCCTCCCATCCCAAAATTTCTAGGTAATTTGAGTTTCTTCACTTGTAACTTGACAAGCATTGAATAATATATGCCTCATTTTAATAGTATAACCTTATCTCCCCCCAAACAAAAATCTCTTGTTCAGTTTCTTCTGTAGGGATTCCCTAAAAAAGATTTTTGAAGTGAATCTGCTCAACTTAAAATGAATTCATCTGATTAGGAACTTCTCCAATCCAGTTGTGGAGATTAAG		Gestational diabetes mellitus uncontrolled	not provided (-)
12-79775930-T-A		PPP1R12A-related disorder	Uncertain significance (Oct 01, 2022)
12-79775976-C-T			Likely pathogenic (May 23, 2024)

GnomAD

Source: gnomAD

dbNSFP

Source: dbNSFP