SUGT1P4-STRA6LP-CCDC180

ncRNA

SUGT1P4-STRA6LP-CCDC180 readthrough

Gene summary

This locus represents a set of read-through transcripts spanning an upstream pseudogene (GeneID:100499484) extending into a downstream protein-coding locus (GeneID:100499483). All of the read-through transcripts are candidates for nonsense-mediated decay (NMD), so they are not thought to express a protein. [provided by RefSeq, Aug 2010]

MANE transcript

N/A

Inheritance

—

ClinVar variants

U:2B:2

Top phenotype

Inborn genetic diseases

Max pathogenic AF

—

Genomic locus

chr9:97,238,497-97,377,287

External References & Databases

Ensembl (ENSG00000255036)

NCBI Gene (57653)

HGNC:53835

GenCC

ClinVar (SUGT1P4-STRA6LP-CCDC180)

GenCC Phenotypes & Disease Associations

Curated gene-disease validity assertions and inheritance patterns

No GenCC data available for this gene.

ClinVar Associated Diseases & Phenotypes

Reported disease conditions connected to SUGT1P4-STRA6LP-CCDC180 variants in ClinVar

4 Conditions Cataloged

Inborn genetic diseasesTotal: 71

not providedTotal: 12

Ductal breast carcinomaTotal: 1

Mycotic Aneurysm, IntracranialTotal: 1

ClinVar Variants & Pathogenicity by Type

Statistics based on transcript . Only rare variants are included.

We include only reliable ClinVar variants with their consequences to MANE Select, MANE Plus Clinical transcripts, or transcripts with TSL equal to 1. Click a count to filter the variants table below.

Slight differences between displayed counts and ClinVar may occur due to a different transcript/consequence chosen by our variant effect predictor, or because we classify Benign/Likely benign as Likely benign and Pathogenic/Likely pathogenic as Likely pathogenic.

Effect	PathogenicP	Likely pathogenicLP	VUS	Likely benignLB	BenignB	Sum
synonymous						0
missense						0
nonsense						0
start loss						0
frameshift						0
splice donor/acceptor (+/-2bp)			2 clinvar	2 clinvar		4
Total	0	0	2	2	0	4

Loading ClinVar variants...

Transcript Catalog

Annotated transcript isoforms across RefSeq and Ensembl databases

Showing 0 of 0 transcripts

Transcript ID	Source	Protein ID	Coding Exons	MANE Status
No transcripts match your selected source or search query.

dbNSFP Gene Annotations

Source: dbNSFP