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GeneBe API Showcase

This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.

API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.

Documentation & Advanced Usage

Complete API documentation:docs.genebe.net/docs/api/overview/

Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/

Python client for pandas:pypi.org/project/genebe/

Java CLI for VCF files:github.com/pstawinski/genebe-cli

All tools documented at:docs.genebe.net

API Request Examples for Variant: 1-203217736-TACTC-T (hg38)

Bash / cURL Example

bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=1&pos=203217736&ref=TACTC&alt=T&genome=hg38&allGenes=true"

API Response

json
{
  "variants": [
    {
      "chr": "1",
      "pos": 203217736,
      "ref": "TACTC",
      "alt": "T",
      "effect": "frameshift_variant,splice_donor_variant,splice_region_variant,intron_variant",
      "transcript": "NM_003465.3",
      "consequences": [
        {
          "aa_ref": "LS",
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "frameshift_variant",
            "splice_donor_variant",
            "splice_region_variant",
            "intron_variant"
          ],
          "exon_rank": 10,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "CHIT1",
          "gene_hgnc_id": 1936,
          "hgvs_c": "c.1155_1156+2delGAGT",
          "hgvs_p": "p.Leu387fs",
          "transcript": "NM_003465.3",
          "protein_id": "NP_003456.1",
          "transcript_support_level": null,
          "aa_start": 385,
          "aa_end": null,
          "aa_length": 466,
          "cds_start": 1155,
          "cds_end": null,
          "cds_length": 1401,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": "ENST00000367229.6",
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_003465.3"
        },
        {
          "aa_ref": "LS",
          "aa_alt": null,
          "canonical": true,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "frameshift_variant",
            "splice_donor_variant",
            "splice_region_variant",
            "intron_variant"
          ],
          "exon_rank": 10,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "CHIT1",
          "gene_hgnc_id": 1936,
          "hgvs_c": "c.1155_1156+2delGAGT",
          "hgvs_p": "p.Leu387fs",
          "transcript": "ENST00000367229.6",
          "protein_id": "ENSP00000356198.1",
          "transcript_support_level": 1,
          "aa_start": 385,
          "aa_end": null,
          "aa_length": 466,
          "cds_start": 1155,
          "cds_end": null,
          "cds_length": 1401,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": "NM_003465.3",
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000367229.6"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "splice_region_variant",
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 11,
          "exon_rank_end": null,
          "exon_count": 13,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "CHIT1",
          "gene_hgnc_id": 1936,
          "hgvs_c": "n.*226_*227+2delGAGT",
          "hgvs_p": null,
          "transcript": "ENST00000503786.1",
          "protein_id": "ENSP00000421617.1",
          "transcript_support_level": 1,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": null,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "nonsense_mediated_decay",
          "feature": "ENST00000503786.1"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "splice_donor_variant",
            "splice_region_variant",
            "intron_variant",
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 10,
          "exon_rank_end": null,
          "exon_count": 12,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "CHIT1",
          "gene_hgnc_id": 1936,
          "hgvs_c": "n.1155_1156+2delGAGT",
          "hgvs_p": null,
          "transcript": "ENST00000491855.5",
          "protein_id": "ENSP00000423778.1",
          "transcript_support_level": 1,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": null,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "nonsense_mediated_decay",
          "feature": "ENST00000491855.5"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "splice_donor_variant",
            "3_prime_UTR_variant",
            "intron_variant"
          ],
          "exon_rank": 11,
          "exon_rank_end": null,
          "exon_count": 13,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "CHIT1",
          "gene_hgnc_id": 1936,
          "hgvs_c": "n.*226_*227+2delGAGT",
          "hgvs_p": null,
          "transcript": "ENST00000503786.1",
          "protein_id": "ENSP00000421617.1",
          "transcript_support_level": 1,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": null,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "nonsense_mediated_decay",
          "feature": "ENST00000503786.1"
        },
        {
          "aa_ref": "LS",
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "frameshift_variant",
            "splice_donor_variant",
            "splice_region_variant",
            "intron_variant"
          ],
          "exon_rank": 11,
          "exon_rank_end": null,
          "exon_count": 12,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "CHIT1",
          "gene_hgnc_id": 1936,
          "hgvs_c": "c.1263_1264+2delGAGT",
          "hgvs_p": "p.Leu423fs",
          "transcript": "ENST00000956207.1",
          "protein_id": "ENSP00000626266.1",
          "transcript_support_level": null,
          "aa_start": 421,
          "aa_end": null,
          "aa_length": 502,
          "cds_start": 1263,
          "cds_end": null,
          "cds_length": 1509,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000956207.1"
        },
        {
          "aa_ref": "LS",
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "frameshift_variant",
            "splice_donor_variant",
            "splice_region_variant",
            "intron_variant"
          ],
          "exon_rank": 10,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "CHIT1",
          "gene_hgnc_id": 1936,
          "hgvs_c": "c.1176_1177+2delGAGT",
          "hgvs_p": "p.Leu394fs",
          "transcript": "ENST00000956204.1",
          "protein_id": "ENSP00000626263.1",
          "transcript_support_level": null,
          "aa_start": 392,
          "aa_end": null,
          "aa_length": 473,
          "cds_start": 1176,
          "cds_end": null,
          "cds_length": 1422,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000956204.1"
        },
        {
          "aa_ref": "LS",
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "frameshift_variant",
            "splice_donor_variant",
            "splice_region_variant",
            "intron_variant"
          ],
          "exon_rank": 10,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "CHIT1",
          "gene_hgnc_id": 1936,
          "hgvs_c": "c.1149_1150+2delGAGT",
          "hgvs_p": "p.Leu385fs",
          "transcript": "ENST00000903374.1",
          "protein_id": "ENSP00000573433.1",
          "transcript_support_level": null,
          "aa_start": 383,
          "aa_end": null,
          "aa_length": 464,
          "cds_start": 1149,
          "cds_end": null,
          "cds_length": 1395,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000903374.1"
        },
        {
          "aa_ref": "LS",
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "frameshift_variant",
            "splice_donor_variant",
            "splice_region_variant",
            "intron_variant"
          ],
          "exon_rank": 10,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "CHIT1",
          "gene_hgnc_id": 1936,
          "hgvs_c": "c.1155_1156+2delGAGT",
          "hgvs_p": "p.Ser386fs",
          "transcript": "ENST00000903373.1",
          "protein_id": "ENSP00000573432.1",
          "transcript_support_level": null,
          "aa_start": 385,
          "aa_end": null,
          "aa_length": 459,
          "cds_start": 1155,
          "cds_end": null,
          "cds_length": 1380,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000903373.1"
        },
        {
          "aa_ref": "LS",
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "frameshift_variant",
            "splice_donor_variant",
            "splice_region_variant",
            "intron_variant"
          ],
          "exon_rank": 9,
          "exon_rank_end": null,
          "exon_count": 10,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "CHIT1",
          "gene_hgnc_id": 1936,
          "hgvs_c": "c.1125_1126+2delGAGT",
          "hgvs_p": "p.Leu377fs",
          "transcript": "ENST00000956201.1",
          "protein_id": "ENSP00000626260.1",
          "transcript_support_level": null,
          "aa_start": 375,
          "aa_end": null,
          "aa_length": 456,
          "cds_start": 1125,
          "cds_end": null,
          "cds_length": 1371,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000956201.1"
        },
        {
          "aa_ref": "LS",
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "frameshift_variant",
            "splice_donor_variant",
            "splice_region_variant",
            "intron_variant"
          ],
          "exon_rank": 9,
          "exon_rank_end": null,
          "exon_count": 10,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "CHIT1",
          "gene_hgnc_id": 1936,
          "hgvs_c": "c.1098_1099+2delGAGT",
          "hgvs_p": "p.Leu368fs",
          "transcript": "NM_001256125.2",
          "protein_id": "NP_001243054.2",
          "transcript_support_level": null,
          "aa_start": 366,
          "aa_end": null,
          "aa_length": 447,
          "cds_start": 1098,
          "cds_end": null,
          "cds_length": 1344,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001256125.2"
        },
        {
          "aa_ref": "LS",
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "frameshift_variant",
            "splice_donor_variant",
            "splice_region_variant",
            "intron_variant"
          ],
          "exon_rank": 9,
          "exon_rank_end": null,
          "exon_count": 10,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "CHIT1",
          "gene_hgnc_id": 1936,
          "hgvs_c": "c.1098_1099+2delGAGT",
          "hgvs_p": "p.Leu368fs",
          "transcript": "ENST00000255427.7",
          "protein_id": "ENSP00000255427.3",
          "transcript_support_level": 2,
          "aa_start": 366,
          "aa_end": null,
          "aa_length": 447,
          "cds_start": 1098,
          "cds_end": null,
          "cds_length": 1344,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000255427.7"
        },
        {
          "aa_ref": "LS",
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "frameshift_variant",
            "splice_donor_variant",
            "splice_region_variant",
            "intron_variant"
          ],
          "exon_rank": 10,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "CHIT1",
          "gene_hgnc_id": 1936,
          "hgvs_c": "c.1089_1090+2delGAGT",
          "hgvs_p": "p.Leu365fs",
          "transcript": "ENST00000956205.1",
          "protein_id": "ENSP00000626264.1",
          "transcript_support_level": null,
          "aa_start": 363,
          "aa_end": null,
          "aa_length": 444,
          "cds_start": 1089,
          "cds_end": null,
          "cds_length": 1335,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000956205.1"
        },
        {
          "aa_ref": "LS",
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "frameshift_variant",
            "splice_donor_variant",
            "splice_region_variant",
            "intron_variant"
          ],
          "exon_rank": 9,
          "exon_rank_end": null,
          "exon_count": 10,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "CHIT1",
          "gene_hgnc_id": 1936,
          "hgvs_c": "c.1098_1099+2delGAGT",
          "hgvs_p": "p.Ser367fs",
          "transcript": "ENST00000956206.1",
          "protein_id": "ENSP00000626265.1",
          "transcript_support_level": null,
          "aa_start": 366,
          "aa_end": null,
          "aa_length": 440,
          "cds_start": 1098,
          "cds_end": null,
          "cds_length": 1323,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000956206.1"
        },
        {
          "aa_ref": "LS",
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "frameshift_variant",
            "splice_donor_variant",
            "splice_region_variant",
            "intron_variant"
          ],
          "exon_rank": 10,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "CHIT1",
          "gene_hgnc_id": 1936,
          "hgvs_c": "c.1068_1069+2delGAGT",
          "hgvs_p": "p.Leu358fs",
          "transcript": "ENST00000956203.1",
          "protein_id": "ENSP00000626262.1",
          "transcript_support_level": null,
          "aa_start": 356,
          "aa_end": null,
          "aa_length": 437,
          "cds_start": 1068,
          "cds_end": null,
          "cds_length": 1314,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000956203.1"
        },
        {
          "aa_ref": "LS",
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "frameshift_variant",
            "splice_donor_variant",
            "splice_region_variant",
            "intron_variant"
          ],
          "exon_rank": 9,
          "exon_rank_end": null,
          "exon_count": 10,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "CHIT1",
          "gene_hgnc_id": 1936,
          "hgvs_c": "c.1041_1042+2delGAGT",
          "hgvs_p": "p.Leu349fs",
          "transcript": "ENST00000956208.1",
          "protein_id": "ENSP00000626267.1",
          "transcript_support_level": null,
          "aa_start": 347,
          "aa_end": null,
          "aa_length": 428,
          "cds_start": 1041,
          "cds_end": null,
          "cds_length": 1287,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000956208.1"
        },
        {
          "aa_ref": "LS",
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "frameshift_variant",
            "splice_donor_variant",
            "splice_region_variant",
            "intron_variant"
          ],
          "exon_rank": 9,
          "exon_rank_end": null,
          "exon_count": 10,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "CHIT1",
          "gene_hgnc_id": 1936,
          "hgvs_c": "c.969_970+2delGAGT",
          "hgvs_p": "p.Leu325fs",
          "transcript": "ENST00000956202.1",
          "protein_id": "ENSP00000626261.1",
          "transcript_support_level": null,
          "aa_start": 323,
          "aa_end": null,
          "aa_length": 404,
          "cds_start": 969,
          "cds_end": null,
          "cds_length": 1215,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000956202.1"
        },
        {
          "aa_ref": "LS",
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "frameshift_variant",
            "splice_donor_variant",
            "splice_region_variant",
            "intron_variant"
          ],
          "exon_rank": 10,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "CHIT1",
          "gene_hgnc_id": 1936,
          "hgvs_c": "c.1200_1201+2delGAGT",
          "hgvs_p": "p.Leu402fs",
          "transcript": "XM_047442899.1",
          "protein_id": "XP_047298855.1",
          "transcript_support_level": null,
          "aa_start": 400,
          "aa_end": null,
          "aa_length": 481,
          "cds_start": 1200,
          "cds_end": null,
          "cds_length": 1446,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "XM_047442899.1"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "splice_donor_variant",
            "splice_region_variant",
            "intron_variant",
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 1,
          "exon_rank_end": null,
          "exon_count": 2,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "CHIT1",
          "gene_hgnc_id": 1936,
          "hgvs_c": "n.282_283+2delGAGT",
          "hgvs_p": null,
          "transcript": "ENST00000479483.1",
          "protein_id": null,
          "transcript_support_level": 3,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": null,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "pseudogene",
          "feature": "ENST00000479483.1"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "splice_donor_variant",
            "splice_region_variant",
            "intron_variant",
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 11,
          "exon_rank_end": null,
          "exon_count": 12,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "CHIT1",
          "gene_hgnc_id": 1936,
          "hgvs_c": "n.5387_5388+2delGAGT",
          "hgvs_p": null,
          "transcript": "ENST00000484834.5",
          "protein_id": null,
          "transcript_support_level": 2,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": null,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "pseudogene",
          "feature": "ENST00000484834.5"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "splice_donor_variant",
            "splice_region_variant",
            "intron_variant",
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 11,
          "exon_rank_end": null,
          "exon_count": 13,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "CHIT1",
          "gene_hgnc_id": 1936,
          "hgvs_c": "n.1349_1350+2delGAGT",
          "hgvs_p": null,
          "transcript": "NR_045784.2",
          "protein_id": null,
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": null,
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          "cds_length": null,
          "cdna_start": null,
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          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "pseudogene",
          "feature": "NR_045784.2"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "splice_donor_variant",
            "splice_region_variant",
            "intron_variant",
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 10,
          "exon_rank_end": null,
          "exon_count": 12,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "CHIT1",
          "gene_hgnc_id": 1936,
          "hgvs_c": "n.1192_1193+2delGAGT",
          "hgvs_p": null,
          "transcript": "NR_045785.2",
          "protein_id": null,
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": null,
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          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "pseudogene",
          "feature": "NR_045785.2"
        }
      ],
      "gene_symbol": "CHIT1",
      "gene_hgnc_id": 1936,
      "dbsnp": "rs143439055",
      "frequency_reference_population": 0.004495337,
      "hom_count_reference_population": 264,
      "allele_count_reference_population": 7254,
      "gnomad_exomes_af": 0.00249588,
      "gnomad_genomes_af": 0.023714,
      "gnomad_exomes_ac": 3648,
      "gnomad_genomes_ac": 3606,
      "gnomad_exomes_homalt": 135,
      "gnomad_genomes_homalt": 129,
      "gnomad_mito_homoplasmic": null,
      "gnomad_mito_heteroplasmic": null,
      "computational_score_selected": null,
      "computational_prediction_selected": null,
      "computational_source_selected": null,
      "splice_score_selected": 1,
      "splice_prediction_selected": "Pathogenic",
      "splice_source_selected": "max_spliceai",
      "revel_score": null,
      "revel_prediction": null,
      "alphamissense_score": null,
      "alphamissense_prediction": null,
      "bayesdelnoaf_score": null,
      "bayesdelnoaf_prediction": null,
      "phylop100way_score": 3.605,
      "phylop100way_prediction": "Benign",
      "spliceai_max_score": 1,
      "spliceai_max_prediction": "Pathogenic",
      "dbscsnv_ada_score": null,
      "dbscsnv_ada_prediction": null,
      "apogee2_score": null,
      "apogee2_prediction": null,
      "mitotip_score": null,
      "mitotip_prediction": null,
      "acmg_score": -10,
      "acmg_classification": "Benign",
      "acmg_criteria": "BP6_Moderate,BA1",
      "acmg_by_gene": [
        {
          "score": -10,
          "benign_score": 10,
          "pathogenic_score": 0,
          "criteria": [
            "BP6_Moderate",
            "BA1"
          ],
          "verdict": "Benign",
          "transcript": "NM_003465.3",
          "gene_symbol": "CHIT1",
          "hgnc_id": 1936,
          "effects": [
            "frameshift_variant",
            "splice_donor_variant",
            "splice_region_variant",
            "intron_variant"
          ],
          "inheritance_mode": "AR",
          "hgvs_c": "c.1155_1156+2delGAGT",
          "hgvs_p": "p.Leu387fs"
        }
      ],
      "clinvar_disease": "Chitotriosidase deficiency,not provided",
      "clinvar_classification": "Benign",
      "clinvar_review_status": "criteria provided, single submitter",
      "clinvar_submissions_summary": "B:1",
      "phenotype_combined": "Chitotriosidase deficiency|not provided",
      "pathogenicity_classification_combined": "Benign",
      "custom_annotations": null
    }
  ],
  "message": null
}
For research and educational, non-commercial use only. Not for clinical or diagnostic use. GeneBe does not provide medical advice. Data use for AI modeling is prohibited: if used, the cost is $0.001 per byte of downloaded uncompressed data.