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GeneBe API Showcase

This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.

API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.

Documentation & Advanced Usage

Complete API documentation:docs.genebe.net/docs/api/overview/

Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/

Python client for pandas:pypi.org/project/genebe/

Java CLI for VCF files:github.com/pstawinski/genebe-cli

All tools documented at:docs.genebe.net

API Request Examples for Variant: 1-217031264-G-T (hg38)

Bash / cURL Example

bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=1&pos=217031264&ref=G&alt=T&genome=hg38&allGenes=true"

API Response

json
{
  "variants": [
    {
      "chr": "1",
      "pos": 217031264,
      "ref": "G",
      "alt": "T",
      "effect": "intron_variant",
      "transcript": "NM_206594.3",
      "consequences": [
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 8,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "ESRRG",
          "gene_hgnc_id": 3474,
          "hgvs_c": "c.-106+58243C>A",
          "hgvs_p": null,
          "transcript": "ENST00000359162.6",
          "protein_id": "ENSP00000352077.2",
          "transcript_support_level": 1,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 435,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 1308,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000359162.6"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 9,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "ESRRG",
          "gene_hgnc_id": 3474,
          "hgvs_c": "c.-229-71579C>A",
          "hgvs_p": null,
          "transcript": "ENST00000366940.6",
          "protein_id": "ENSP00000355907.2",
          "transcript_support_level": 1,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 435,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 1308,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000366940.6"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 9,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "ESRRG",
          "gene_hgnc_id": 3474,
          "hgvs_c": "c.-223-91591C>A",
          "hgvs_p": null,
          "transcript": "ENST00000493603.5",
          "protein_id": "ENSP00000419594.1",
          "transcript_support_level": 1,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 435,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 1308,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000493603.5"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 9,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "ESRRG",
          "gene_hgnc_id": 3474,
          "hgvs_c": "c.-577-30540C>A",
          "hgvs_p": null,
          "transcript": "ENST00000493748.5",
          "protein_id": "ENSP00000417374.1",
          "transcript_support_level": 1,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 435,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 1308,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000493748.5"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 3,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "ESRRG",
          "gene_hgnc_id": 3474,
          "hgvs_c": "n.130+58243C>A",
          "hgvs_p": null,
          "transcript": "ENST00000471371.5",
          "protein_id": null,
          "transcript_support_level": 1,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": null,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "pseudogene",
          "feature": "ENST00000471371.5"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 8,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "ESRRG",
          "gene_hgnc_id": 3474,
          "hgvs_c": "c.-106+58523C>A",
          "hgvs_p": null,
          "transcript": "ENST00000673908.1",
          "protein_id": "ENSP00000500992.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 442,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 1329,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000673908.1"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 9,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "ESRRG",
          "gene_hgnc_id": 3474,
          "hgvs_c": "c.-229-71579C>A",
          "hgvs_p": null,
          "transcript": "NM_001134285.3",
          "protein_id": "NP_001127757.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 435,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 1308,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001134285.3"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 9,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "ESRRG",
          "gene_hgnc_id": 3474,
          "hgvs_c": "c.-577-30540C>A",
          "hgvs_p": null,
          "transcript": "NM_001243509.2",
          "protein_id": "NP_001230438.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 435,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 1308,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001243509.2"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 9,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "ESRRG",
          "gene_hgnc_id": 3474,
          "hgvs_c": "c.-223-91591C>A",
          "hgvs_p": null,
          "transcript": "NM_001243510.3",
          "protein_id": "NP_001230439.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 435,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 1308,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001243510.3"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 8,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "ESRRG",
          "gene_hgnc_id": 3474,
          "hgvs_c": "c.-105-91591C>A",
          "hgvs_p": null,
          "transcript": "NM_001243511.3",
          "protein_id": "NP_001230440.1",
          "transcript_support_level": null,
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          "aa_length": 435,
          "cds_start": null,
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          "cds_length": 1308,
          "cdna_start": null,
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          "cdna_length": null,
          "mane_select": null,
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          "biotype": "protein_coding",
          "feature": "NM_001243511.3"
        },
        {
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          "canonical": false,
          "protein_coding": true,
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          "consequences": [
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          ],
          "exon_rank": null,
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          "exon_count": 10,
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          "gene_symbol": "ESRRG",
          "gene_hgnc_id": 3474,
          "hgvs_c": "c.-285+38431C>A",
          "hgvs_p": null,
          "transcript": "NM_001350122.2",
          "protein_id": "NP_001337051.1",
          "transcript_support_level": null,
          "aa_start": null,
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          "aa_length": 435,
          "cds_start": null,
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          "cdna_start": null,
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          "cdna_length": null,
          "mane_select": null,
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          "feature": "NM_001350122.2"
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        {
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          "canonical": false,
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          "strand": false,
          "consequences": [
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          "exon_count": 9,
          "intron_rank": 1,
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          "gene_symbol": "ESRRG",
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          "hgvs_c": "c.-225+58243C>A",
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        {
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        {
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          "gene_symbol": "ESRRG",
          "gene_hgnc_id": 3474,
          "hgvs_c": "c.-106+38431C>A",
          "hgvs_p": null,
          "transcript": "NM_001350125.2",
          "protein_id": "NP_001337054.1",
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        {
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        {
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          "gene_symbol": "ESRRG",
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        {
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          "gene_symbol": "ESRRG",
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          "transcript": "ENST00000361525.7",
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        {
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          "intron_rank": 1,
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          "gene_symbol": "ESRRG",
          "gene_hgnc_id": 3474,
          "hgvs_c": "c.-176+58243C>A",
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          "transcript": "NM_001243506.2",
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          "biotype": "protein_coding",
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        },
        {
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          "exon_count": 7,
          "intron_rank": 1,
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      "custom_annotations": null
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  "message": null
}
For research and educational, non-commercial use only. Not for clinical or diagnostic use. GeneBe does not provide medical advice. Data use for AI modeling is prohibited: if used, the cost is $0.001 per byte of downloaded uncompressed data.