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GeneBe API Showcase

This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.

API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.

Documentation & Advanced Usage

Complete API documentation:docs.genebe.net/docs/api/overview/

Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/

Python client for pandas:pypi.org/project/genebe/

Java CLI for VCF files:github.com/pstawinski/genebe-cli

All tools documented at:docs.genebe.net

API Request Examples for Variant: 1-35381712-A-G (hg38)

Bash / cURL Example

bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=1&pos=35381712&ref=A&alt=G&genome=hg38&allGenes=true"

API Response

json
{
  "variants": [
    {
      "chr": "1",
      "pos": 35381712,
      "ref": "A",
      "alt": "G",
      "effect": "missense_variant",
      "transcript": "NM_001375653.1",
      "consequences": [
        {
          "aa_ref": "Q",
          "aa_alt": "R",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 9,
          "exon_rank_end": null,
          "exon_count": 30,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ZMYM4",
          "gene_hgnc_id": 13055,
          "hgvs_c": "c.1523A>G",
          "hgvs_p": "p.Gln508Arg",
          "transcript": "NM_005095.3",
          "protein_id": "NP_005086.2",
          "transcript_support_level": null,
          "aa_start": 508,
          "aa_end": null,
          "aa_length": 1548,
          "cds_start": 1523,
          "cds_end": null,
          "cds_length": 4647,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": "ENST00000314607.11",
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_005095.3"
        },
        {
          "aa_ref": "Q",
          "aa_alt": "R",
          "canonical": true,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 9,
          "exon_rank_end": null,
          "exon_count": 30,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ZMYM4",
          "gene_hgnc_id": 13055,
          "hgvs_c": "c.1523A>G",
          "hgvs_p": "p.Gln508Arg",
          "transcript": "ENST00000314607.11",
          "protein_id": "ENSP00000322915.6",
          "transcript_support_level": 2,
          "aa_start": 508,
          "aa_end": null,
          "aa_length": 1548,
          "cds_start": 1523,
          "cds_end": null,
          "cds_length": 4647,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": "NM_005095.3",
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000314607.11"
        },
        {
          "aa_ref": "Q",
          "aa_alt": "R",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 9,
          "exon_rank_end": null,
          "exon_count": 30,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ZMYM4",
          "gene_hgnc_id": 13055,
          "hgvs_c": "c.1532A>G",
          "hgvs_p": "p.Gln511Arg",
          "transcript": "NM_001375653.1",
          "protein_id": "NP_001362582.1",
          "transcript_support_level": null,
          "aa_start": 511,
          "aa_end": null,
          "aa_length": 1551,
          "cds_start": 1532,
          "cds_end": null,
          "cds_length": 4656,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001375653.1"
        },
        {
          "aa_ref": "Q",
          "aa_alt": "R",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 9,
          "exon_rank_end": null,
          "exon_count": 30,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ZMYM4",
          "gene_hgnc_id": 13055,
          "hgvs_c": "c.1523A>G",
          "hgvs_p": "p.Gln508Arg",
          "transcript": "ENST00000933225.1",
          "protein_id": "ENSP00000603284.1",
          "transcript_support_level": null,
          "aa_start": 508,
          "aa_end": null,
          "aa_length": 1546,
          "cds_start": 1523,
          "cds_end": null,
          "cds_length": 4641,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000933225.1"
        },
        {
          "aa_ref": "Q",
          "aa_alt": "R",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 9,
          "exon_rank_end": null,
          "exon_count": 30,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ZMYM4",
          "gene_hgnc_id": 13055,
          "hgvs_c": "c.1523A>G",
          "hgvs_p": "p.Gln508Arg",
          "transcript": "ENST00000933226.1",
          "protein_id": "ENSP00000603285.1",
          "transcript_support_level": null,
          "aa_start": 508,
          "aa_end": null,
          "aa_length": 1525,
          "cds_start": 1523,
          "cds_end": null,
          "cds_length": 4578,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000933226.1"
        },
        {
          "aa_ref": "Q",
          "aa_alt": "R",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 10,
          "exon_rank_end": null,
          "exon_count": 31,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ZMYM4",
          "gene_hgnc_id": 13055,
          "hgvs_c": "c.1427A>G",
          "hgvs_p": "p.Gln476Arg",
          "transcript": "NM_001350138.2",
          "protein_id": "NP_001337067.1",
          "transcript_support_level": null,
          "aa_start": 476,
          "aa_end": null,
          "aa_length": 1516,
          "cds_start": 1427,
          "cds_end": null,
          "cds_length": 4551,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001350138.2"
        },
        {
          "aa_ref": "Q",
          "aa_alt": "R",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 8,
          "exon_rank_end": null,
          "exon_count": 29,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ZMYM4",
          "gene_hgnc_id": 13055,
          "hgvs_c": "c.1352A>G",
          "hgvs_p": "p.Gln451Arg",
          "transcript": "ENST00000933224.1",
          "protein_id": "ENSP00000603283.1",
          "transcript_support_level": null,
          "aa_start": 451,
          "aa_end": null,
          "aa_length": 1491,
          "cds_start": 1352,
          "cds_end": null,
          "cds_length": 4476,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000933224.1"
        },
        {
          "aa_ref": "Q",
          "aa_alt": "R",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 10,
          "exon_rank_end": null,
          "exon_count": 31,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ZMYM4",
          "gene_hgnc_id": 13055,
          "hgvs_c": "c.551A>G",
          "hgvs_p": "p.Gln184Arg",
          "transcript": "NM_001350139.2",
          "protein_id": "NP_001337068.1",
          "transcript_support_level": null,
          "aa_start": 184,
          "aa_end": null,
          "aa_length": 1224,
          "cds_start": 551,
          "cds_end": null,
          "cds_length": 3675,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001350139.2"
        },
        {
          "aa_ref": "Q",
          "aa_alt": "R",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 7,
          "exon_rank_end": null,
          "exon_count": 28,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ZMYM4",
          "gene_hgnc_id": 13055,
          "hgvs_c": "c.551A>G",
          "hgvs_p": "p.Gln184Arg",
          "transcript": "NM_001350140.2",
          "protein_id": "NP_001337069.1",
          "transcript_support_level": null,
          "aa_start": 184,
          "aa_end": null,
          "aa_length": 1224,
          "cds_start": 551,
          "cds_end": null,
          "cds_length": 3675,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001350140.2"
        },
        {
          "aa_ref": "Q",
          "aa_alt": "R",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 24,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ZMYM4",
          "gene_hgnc_id": 13055,
          "hgvs_c": "c.767A>G",
          "hgvs_p": "p.Gln256Arg",
          "transcript": "ENST00000457946.1",
          "protein_id": "ENSP00000400506.1",
          "transcript_support_level": 5,
          "aa_start": 256,
          "aa_end": null,
          "aa_length": 1206,
          "cds_start": 767,
          "cds_end": null,
          "cds_length": 3621,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000457946.1"
        },
        {
          "aa_ref": "Q",
          "aa_alt": "R",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 10,
          "exon_rank_end": null,
          "exon_count": 31,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ZMYM4",
          "gene_hgnc_id": 13055,
          "hgvs_c": "c.1427A>G",
          "hgvs_p": "p.Gln476Arg",
          "transcript": "XM_017002803.2",
          "protein_id": "XP_016858292.1",
          "transcript_support_level": null,
          "aa_start": 476,
          "aa_end": null,
          "aa_length": 1516,
          "cds_start": 1427,
          "cds_end": null,
          "cds_length": 4551,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "XM_017002803.2"
        },
        {
          "aa_ref": "Q",
          "aa_alt": "R",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 8,
          "exon_rank_end": null,
          "exon_count": 29,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ZMYM4",
          "gene_hgnc_id": 13055,
          "hgvs_c": "c.1427A>G",
          "hgvs_p": "p.Gln476Arg",
          "transcript": "XM_047434269.1",
          "protein_id": "XP_047290225.1",
          "transcript_support_level": null,
          "aa_start": 476,
          "aa_end": null,
          "aa_length": 1516,
          "cds_start": 1427,
          "cds_end": null,
          "cds_length": 4551,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "XM_047434269.1"
        },
        {
          "aa_ref": "Q",
          "aa_alt": "R",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 10,
          "exon_rank_end": null,
          "exon_count": 31,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ZMYM4",
          "gene_hgnc_id": 13055,
          "hgvs_c": "c.1427A>G",
          "hgvs_p": "p.Gln476Arg",
          "transcript": "XM_047434270.1",
          "protein_id": "XP_047290226.1",
          "transcript_support_level": null,
          "aa_start": 476,
          "aa_end": null,
          "aa_length": 1516,
          "cds_start": 1427,
          "cds_end": null,
          "cds_length": 4551,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "XM_047434270.1"
        },
        {
          "aa_ref": "Q",
          "aa_alt": "R",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 11,
          "exon_rank_end": null,
          "exon_count": 32,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ZMYM4",
          "gene_hgnc_id": 13055,
          "hgvs_c": "c.1427A>G",
          "hgvs_p": "p.Gln476Arg",
          "transcript": "XM_047434271.1",
          "protein_id": "XP_047290227.1",
          "transcript_support_level": null,
          "aa_start": 476,
          "aa_end": null,
          "aa_length": 1516,
          "cds_start": 1427,
          "cds_end": null,
          "cds_length": 4551,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "XM_047434271.1"
        },
        {
          "aa_ref": "Q",
          "aa_alt": "R",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 7,
          "exon_rank_end": null,
          "exon_count": 28,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ZMYM4",
          "gene_hgnc_id": 13055,
          "hgvs_c": "c.740A>G",
          "hgvs_p": "p.Gln247Arg",
          "transcript": "XM_047434274.1",
          "protein_id": "XP_047290230.1",
          "transcript_support_level": null,
          "aa_start": 247,
          "aa_end": null,
          "aa_length": 1287,
          "cds_start": 740,
          "cds_end": null,
          "cds_length": 3864,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "XM_047434274.1"
        },
        {
          "aa_ref": "Q",
          "aa_alt": "R",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 9,
          "exon_rank_end": null,
          "exon_count": 26,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ZMYM4",
          "gene_hgnc_id": 13055,
          "hgvs_c": "c.1532A>G",
          "hgvs_p": "p.Gln511Arg",
          "transcript": "XM_047434276.1",
          "protein_id": "XP_047290232.1",
          "transcript_support_level": null,
          "aa_start": 511,
          "aa_end": null,
          "aa_length": 1271,
          "cds_start": 1532,
          "cds_end": null,
          "cds_length": 3816,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "XM_047434276.1"
        },
        {
          "aa_ref": "Q",
          "aa_alt": "R",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 6,
          "exon_rank_end": null,
          "exon_count": 27,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ZMYM4",
          "gene_hgnc_id": 13055,
          "hgvs_c": "c.551A>G",
          "hgvs_p": "p.Gln184Arg",
          "transcript": "XM_005271331.3",
          "protein_id": "XP_005271388.1",
          "transcript_support_level": null,
          "aa_start": 184,
          "aa_end": null,
          "aa_length": 1224,
          "cds_start": 551,
          "cds_end": null,
          "cds_length": 3675,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "XM_005271331.3"
        },
        {
          "aa_ref": "Q",
          "aa_alt": "R",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 6,
          "exon_rank_end": null,
          "exon_count": 27,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ZMYM4",
          "gene_hgnc_id": 13055,
          "hgvs_c": "c.551A>G",
          "hgvs_p": "p.Gln184Arg",
          "transcript": "XM_024450838.2",
          "protein_id": "XP_024306606.1",
          "transcript_support_level": null,
          "aa_start": 184,
          "aa_end": null,
          "aa_length": 1224,
          "cds_start": 551,
          "cds_end": null,
          "cds_length": 3675,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "XM_024450838.2"
        },
        {
          "aa_ref": "Q",
          "aa_alt": "R",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 8,
          "exon_rank_end": null,
          "exon_count": 29,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ZMYM4",
          "gene_hgnc_id": 13055,
          "hgvs_c": "c.551A>G",
          "hgvs_p": "p.Gln184Arg",
          "transcript": "XM_047434278.1",
          "protein_id": "XP_047290234.1",
          "transcript_support_level": null,
          "aa_start": 184,
          "aa_end": null,
          "aa_length": 1224,
          "cds_start": 551,
          "cds_end": null,
          "cds_length": 3675,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "XM_047434278.1"
        },
        {
          "aa_ref": "Q",
          "aa_alt": "R",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 3,
          "exon_rank_end": null,
          "exon_count": 24,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ZMYM4",
          "gene_hgnc_id": 13055,
          "hgvs_c": "c.362A>G",
          "hgvs_p": "p.Gln121Arg",
          "transcript": "XM_047434279.1",
          "protein_id": "XP_047290235.1",
          "transcript_support_level": null,
          "aa_start": 121,
          "aa_end": null,
          "aa_length": 1161,
          "cds_start": 362,
          "cds_end": null,
          "cds_length": 3486,
          "cdna_start": null,
          "cdna_end": null,
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          "biotype": "protein_coding",
          "feature": "XM_047434279.1"
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        {
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          "protein_coding": true,
          "strand": true,
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          ],
          "exon_rank": 6,
          "exon_rank_end": null,
          "exon_count": 27,
          "intron_rank": null,
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          "gene_symbol": "ZMYM4",
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          "hgvs_c": "c.188A>G",
          "hgvs_p": "p.Gln63Arg",
          "transcript": "XM_047434282.1",
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          "transcript_support_level": null,
          "aa_start": 63,
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          "aa_length": 1103,
          "cds_start": 188,
          "cds_end": null,
          "cds_length": 3312,
          "cdna_start": null,
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          "cdna_length": null,
          "mane_select": null,
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          "biotype": "protein_coding",
          "feature": "XM_047434282.1"
        },
        {
          "aa_ref": "Q",
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          "protein_coding": true,
          "strand": true,
          "consequences": [
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          ],
          "exon_rank": 4,
          "exon_rank_end": null,
          "exon_count": 25,
          "intron_rank": null,
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          "gene_symbol": "ZMYM4",
          "gene_hgnc_id": 13055,
          "hgvs_c": "c.188A>G",
          "hgvs_p": "p.Gln63Arg",
          "transcript": "XM_047434289.1",
          "protein_id": "XP_047290245.1",
          "transcript_support_level": null,
          "aa_start": 63,
          "aa_end": null,
          "aa_length": 1103,
          "cds_start": 188,
          "cds_end": null,
          "cds_length": 3312,
          "cdna_start": null,
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          "cdna_length": null,
          "mane_select": null,
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          "biotype": "protein_coding",
          "feature": "XM_047434289.1"
        },
        {
          "aa_ref": null,
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          "canonical": false,
          "protein_coding": false,
          "strand": true,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 9,
          "exon_rank_end": null,
          "exon_count": 21,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ZMYM4",
          "gene_hgnc_id": 13055,
          "hgvs_c": "n.1861A>G",
          "hgvs_p": null,
          "transcript": "XR_007064889.1",
          "protein_id": null,
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": null,
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          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "pseudogene",
          "feature": "XR_007064889.1"
        },
        {
          "aa_ref": null,
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          "canonical": false,
          "protein_coding": false,
          "strand": true,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 10,
          "exon_rank_end": null,
          "exon_count": 22,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ZMYM4",
          "gene_hgnc_id": 13055,
          "hgvs_c": "n.1895A>G",
          "hgvs_p": null,
          "transcript": "XR_007064890.1",
          "protein_id": null,
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": null,
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          "cds_length": null,
          "cdna_start": null,
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          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "pseudogene",
          "feature": "XR_007064890.1"
        },
        {
          "aa_ref": null,
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          "canonical": false,
          "protein_coding": false,
          "strand": true,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 9,
          "exon_rank_end": null,
          "exon_count": 21,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ZMYM4",
          "gene_hgnc_id": 13055,
          "hgvs_c": "n.1870A>G",
          "hgvs_p": null,
          "transcript": "XR_246305.5",
          "protein_id": null,
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": null,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "pseudogene",
          "feature": "XR_246305.5"
        }
      ],
      "gene_symbol": "ZMYM4",
      "gene_hgnc_id": 13055,
      "dbsnp": null,
      "frequency_reference_population": 6.840516e-7,
      "hom_count_reference_population": 0,
      "allele_count_reference_population": 1,
      "gnomad_exomes_af": 6.84052e-7,
      "gnomad_genomes_af": null,
      "gnomad_exomes_ac": 1,
      "gnomad_genomes_ac": null,
      "gnomad_exomes_homalt": 0,
      "gnomad_genomes_homalt": null,
      "gnomad_mito_homoplasmic": null,
      "gnomad_mito_heteroplasmic": null,
      "computational_score_selected": 0.5946974754333496,
      "computational_prediction_selected": "Uncertain_significance",
      "computational_source_selected": "MetaRNN",
      "splice_score_selected": 0,
      "splice_prediction_selected": "Benign",
      "splice_source_selected": "max_spliceai",
      "revel_score": 0.081,
      "revel_prediction": "Benign",
      "alphamissense_score": 0.2659,
      "alphamissense_prediction": "Benign",
      "bayesdelnoaf_score": -0.4,
      "bayesdelnoaf_prediction": "Benign",
      "phylop100way_score": 3.932,
      "phylop100way_prediction": "Uncertain_significance",
      "spliceai_max_score": 0,
      "spliceai_max_prediction": "Benign",
      "dbscsnv_ada_score": null,
      "dbscsnv_ada_prediction": null,
      "apogee2_score": null,
      "apogee2_prediction": null,
      "mitotip_score": null,
      "mitotip_prediction": null,
      "acmg_score": 2,
      "acmg_classification": "Uncertain_significance",
      "acmg_criteria": "PM2",
      "acmg_by_gene": [
        {
          "score": 2,
          "benign_score": 0,
          "pathogenic_score": 2,
          "criteria": [
            "PM2"
          ],
          "verdict": "Uncertain_significance",
          "transcript": "NM_001375653.1",
          "gene_symbol": "ZMYM4",
          "hgnc_id": 13055,
          "effects": [
            "missense_variant"
          ],
          "inheritance_mode": "AD",
          "hgvs_c": "c.1532A>G",
          "hgvs_p": "p.Gln511Arg"
        }
      ],
      "clinvar_disease": "not specified",
      "clinvar_classification": "Uncertain significance",
      "clinvar_review_status": "criteria provided, single submitter",
      "clinvar_submissions_summary": "US:1",
      "phenotype_combined": "not specified",
      "pathogenicity_classification_combined": "Uncertain significance",
      "custom_annotations": null
    }
  ],
  "message": null
}