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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 1-40067631-C-G (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=1&pos=40067631&ref=C&alt=G&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "1",
"pos": 40067631,
"ref": "C",
"alt": "G",
"effect": "missense_variant",
"transcript": "NM_006367.4",
"consequences": [
{
"aa_ref": "P",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CAP1",
"gene_hgnc_id": 20040,
"hgvs_c": "c.722C>G",
"hgvs_p": "p.Pro241Arg",
"transcript": "NM_006367.4",
"protein_id": "NP_006358.2",
"transcript_support_level": null,
"aa_start": 241,
"aa_end": null,
"aa_length": 475,
"cds_start": 722,
"cds_end": null,
"cds_length": 1428,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "ENST00000372805.8",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_006367.4"
},
{
"aa_ref": "P",
"aa_alt": "R",
"canonical": true,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CAP1",
"gene_hgnc_id": 20040,
"hgvs_c": "c.722C>G",
"hgvs_p": "p.Pro241Arg",
"transcript": "ENST00000372805.8",
"protein_id": "ENSP00000361891.3",
"transcript_support_level": 1,
"aa_start": 241,
"aa_end": null,
"aa_length": 475,
"cds_start": 722,
"cds_end": null,
"cds_length": 1428,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "NM_006367.4",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000372805.8"
},
{
"aa_ref": "P",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CAP1",
"gene_hgnc_id": 20040,
"hgvs_c": "c.722C>G",
"hgvs_p": "p.Pro241Arg",
"transcript": "ENST00000372792.7",
"protein_id": "ENSP00000361878.2",
"transcript_support_level": 1,
"aa_start": 241,
"aa_end": null,
"aa_length": 475,
"cds_start": 722,
"cds_end": null,
"cds_length": 1428,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000372792.7"
},
{
"aa_ref": "P",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CAP1",
"gene_hgnc_id": 20040,
"hgvs_c": "c.722C>G",
"hgvs_p": "p.Pro241Arg",
"transcript": "ENST00000372797.7",
"protein_id": "ENSP00000361883.3",
"transcript_support_level": 1,
"aa_start": 241,
"aa_end": null,
"aa_length": 475,
"cds_start": 722,
"cds_end": null,
"cds_length": 1428,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000372797.7"
},
{
"aa_ref": "P",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CAP1",
"gene_hgnc_id": 20040,
"hgvs_c": "c.722C>G",
"hgvs_p": "p.Pro241Arg",
"transcript": "ENST00000942535.1",
"protein_id": "ENSP00000612594.1",
"transcript_support_level": null,
"aa_start": 241,
"aa_end": null,
"aa_length": 482,
"cds_start": 722,
"cds_end": null,
"cds_length": 1449,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000942535.1"
},
{
"aa_ref": "P",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CAP1",
"gene_hgnc_id": 20040,
"hgvs_c": "c.722C>G",
"hgvs_p": "p.Pro241Arg",
"transcript": "NM_001105530.2",
"protein_id": "NP_001099000.2",
"transcript_support_level": null,
"aa_start": 241,
"aa_end": null,
"aa_length": 475,
"cds_start": 722,
"cds_end": null,
"cds_length": 1428,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001105530.2"
},
{
"aa_ref": "P",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 9,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CAP1",
"gene_hgnc_id": 20040,
"hgvs_c": "c.722C>G",
"hgvs_p": "p.Pro241Arg",
"transcript": "NM_001350475.2",
"protein_id": "NP_001337404.2",
"transcript_support_level": null,
"aa_start": 241,
"aa_end": null,
"aa_length": 475,
"cds_start": 722,
"cds_end": null,
"cds_length": 1428,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001350475.2"
},
{
"aa_ref": "P",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CAP1",
"gene_hgnc_id": 20040,
"hgvs_c": "c.722C>G",
"hgvs_p": "p.Pro241Arg",
"transcript": "NM_001350476.2",
"protein_id": "NP_001337405.2",
"transcript_support_level": null,
"aa_start": 241,
"aa_end": null,
"aa_length": 475,
"cds_start": 722,
"cds_end": null,
"cds_length": 1428,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001350476.2"
},
{
"aa_ref": "P",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CAP1",
"gene_hgnc_id": 20040,
"hgvs_c": "c.722C>G",
"hgvs_p": "p.Pro241Arg",
"transcript": "NM_001350477.3",
"protein_id": "NP_001337406.2",
"transcript_support_level": null,
"aa_start": 241,
"aa_end": null,
"aa_length": 475,
"cds_start": 722,
"cds_end": null,
"cds_length": 1428,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001350477.3"
},
{
"aa_ref": "P",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 9,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CAP1",
"gene_hgnc_id": 20040,
"hgvs_c": "c.722C>G",
"hgvs_p": "p.Pro241Arg",
"transcript": "NM_001350478.2",
"protein_id": "NP_001337407.2",
"transcript_support_level": null,
"aa_start": 241,
"aa_end": null,
"aa_length": 475,
"cds_start": 722,
"cds_end": null,
"cds_length": 1428,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001350478.2"
},
{
"aa_ref": "P",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CAP1",
"gene_hgnc_id": 20040,
"hgvs_c": "c.722C>G",
"hgvs_p": "p.Pro241Arg",
"transcript": "NM_001350479.2",
"protein_id": "NP_001337408.2",
"transcript_support_level": null,
"aa_start": 241,
"aa_end": null,
"aa_length": 475,
"cds_start": 722,
"cds_end": null,
"cds_length": 1428,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001350479.2"
},
{
"aa_ref": "P",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CAP1",
"gene_hgnc_id": 20040,
"hgvs_c": "c.722C>G",
"hgvs_p": "p.Pro241Arg",
"transcript": "NM_001350480.2",
"protein_id": "NP_001337409.2",
"transcript_support_level": null,
"aa_start": 241,
"aa_end": null,
"aa_length": 475,
"cds_start": 722,
"cds_end": null,
"cds_length": 1428,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001350480.2"
},
{
"aa_ref": "P",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CAP1",
"gene_hgnc_id": 20040,
"hgvs_c": "c.722C>G",
"hgvs_p": "p.Pro241Arg",
"transcript": "NM_001350481.2",
"protein_id": "NP_001337410.2",
"transcript_support_level": null,
"aa_start": 241,
"aa_end": null,
"aa_length": 475,
"cds_start": 722,
"cds_end": null,
"cds_length": 1428,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001350481.2"
},
{
"aa_ref": "P",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CAP1",
"gene_hgnc_id": 20040,
"hgvs_c": "c.722C>G",
"hgvs_p": "p.Pro241Arg",
"transcript": "ENST00000911193.1",
"protein_id": "ENSP00000581252.1",
"transcript_support_level": null,
"aa_start": 241,
"aa_end": null,
"aa_length": 475,
"cds_start": 722,
"cds_end": null,
"cds_length": 1428,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000911193.1"
},
{
"aa_ref": "P",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CAP1",
"gene_hgnc_id": 20040,
"hgvs_c": "c.722C>G",
"hgvs_p": "p.Pro241Arg",
"transcript": "ENST00000911194.1",
"protein_id": "ENSP00000581253.1",
"transcript_support_level": null,
"aa_start": 241,
"aa_end": null,
"aa_length": 475,
"cds_start": 722,
"cds_end": null,
"cds_length": 1428,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000911194.1"
},
{
"aa_ref": "P",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CAP1",
"gene_hgnc_id": 20040,
"hgvs_c": "c.722C>G",
"hgvs_p": "p.Pro241Arg",
"transcript": "ENST00000911195.1",
"protein_id": "ENSP00000581254.1",
"transcript_support_level": null,
"aa_start": 241,
"aa_end": null,
"aa_length": 475,
"cds_start": 722,
"cds_end": null,
"cds_length": 1428,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000911195.1"
},
{
"aa_ref": "P",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CAP1",
"gene_hgnc_id": 20040,
"hgvs_c": "c.722C>G",
"hgvs_p": "p.Pro241Arg",
"transcript": "ENST00000911196.1",
"protein_id": "ENSP00000581255.1",
"transcript_support_level": null,
"aa_start": 241,
"aa_end": null,
"aa_length": 475,
"cds_start": 722,
"cds_end": null,
"cds_length": 1428,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000911196.1"
},
{
"aa_ref": "P",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 9,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CAP1",
"gene_hgnc_id": 20040,
"hgvs_c": "c.722C>G",
"hgvs_p": "p.Pro241Arg",
"transcript": "ENST00000911199.1",
"protein_id": "ENSP00000581258.1",
"transcript_support_level": null,
"aa_start": 241,
"aa_end": null,
"aa_length": 475,
"cds_start": 722,
"cds_end": null,
"cds_length": 1428,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000911199.1"
},
{
"aa_ref": "P",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CAP1",
"gene_hgnc_id": 20040,
"hgvs_c": "c.722C>G",
"hgvs_p": "p.Pro241Arg",
"transcript": "ENST00000911200.1",
"protein_id": "ENSP00000581259.1",
"transcript_support_level": null,
"aa_start": 241,
"aa_end": null,
"aa_length": 475,
"cds_start": 722,
"cds_end": null,
"cds_length": 1428,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000911200.1"
},
{
"aa_ref": "P",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 9,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CAP1",
"gene_hgnc_id": 20040,
"hgvs_c": "c.722C>G",
"hgvs_p": "p.Pro241Arg",
"transcript": "ENST00000911201.1",
"protein_id": "ENSP00000581260.1",
"transcript_support_level": null,
"aa_start": 241,
"aa_end": null,
"aa_length": 475,
"cds_start": 722,
"cds_end": null,
"cds_length": 1428,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000911201.1"
},
{
"aa_ref": "P",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 9,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CAP1",
"gene_hgnc_id": 20040,
"hgvs_c": "c.722C>G",
"hgvs_p": "p.Pro241Arg",
"transcript": "ENST00000911203.1",
"protein_id": "ENSP00000581262.1",
"transcript_support_level": null,
"aa_start": 241,
"aa_end": null,
"aa_length": 475,
"cds_start": 722,
"cds_end": null,
"cds_length": 1428,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000911203.1"
},
{
"aa_ref": "P",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 9,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CAP1",
"gene_hgnc_id": 20040,
"hgvs_c": "c.722C>G",
"hgvs_p": "p.Pro241Arg",
"transcript": "ENST00000911205.1",
"protein_id": "ENSP00000581264.1",
"transcript_support_level": null,
"aa_start": 241,
"aa_end": null,
"aa_length": 475,
"cds_start": 722,
"cds_end": null,
"cds_length": 1428,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000911205.1"
},
{
"aa_ref": "P",
"aa_alt": "R",
"canonical": false,
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}