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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 1-6637211-G-C (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=1&pos=6637211&ref=G&alt=C&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "1",
"pos": 6637211,
"ref": "G",
"alt": "C",
"effect": "missense_variant",
"transcript": "NM_018198.4",
"consequences": [
{
"aa_ref": "T",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 14,
"exon_rank_end": null,
"exon_count": 16,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DNAJC11",
"gene_hgnc_id": 25570,
"hgvs_c": "c.1511C>G",
"hgvs_p": "p.Thr504Arg",
"transcript": "NM_018198.4",
"protein_id": "NP_060668.2",
"transcript_support_level": null,
"aa_start": 504,
"aa_end": null,
"aa_length": 559,
"cds_start": 1511,
"cds_end": null,
"cds_length": 1680,
"cdna_start": 1527,
"cdna_end": null,
"cdna_length": 3201,
"mane_select": "ENST00000377577.10",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_018198.4"
},
{
"aa_ref": "T",
"aa_alt": "R",
"canonical": true,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 14,
"exon_rank_end": null,
"exon_count": 16,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DNAJC11",
"gene_hgnc_id": 25570,
"hgvs_c": "c.1511C>G",
"hgvs_p": "p.Thr504Arg",
"transcript": "ENST00000377577.10",
"protein_id": "ENSP00000366800.5",
"transcript_support_level": 1,
"aa_start": 504,
"aa_end": null,
"aa_length": 559,
"cds_start": 1511,
"cds_end": null,
"cds_length": 1680,
"cdna_start": 1527,
"cdna_end": null,
"cdna_length": 3201,
"mane_select": "NM_018198.4",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000377577.10"
},
{
"aa_ref": "T",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 13,
"exon_rank_end": null,
"exon_count": 15,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DNAJC11",
"gene_hgnc_id": 25570,
"hgvs_c": "c.1355C>G",
"hgvs_p": "p.Thr452Arg",
"transcript": "ENST00000294401.11",
"protein_id": "ENSP00000294401.7",
"transcript_support_level": 1,
"aa_start": 452,
"aa_end": null,
"aa_length": 507,
"cds_start": 1355,
"cds_end": null,
"cds_length": 1524,
"cdna_start": 1479,
"cdna_end": null,
"cdna_length": 2210,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000294401.11"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": 7,
"intron_rank_end": null,
"gene_symbol": "DNAJC11",
"gene_hgnc_id": 25570,
"hgvs_c": "c.741-2427C>G",
"hgvs_p": null,
"transcript": "ENST00000451196.5",
"protein_id": "ENSP00000415871.1",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 332,
"cds_start": null,
"cds_end": null,
"cds_length": 999,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 1357,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000451196.5"
},
{
"aa_ref": "T",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 15,
"exon_rank_end": null,
"exon_count": 17,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DNAJC11",
"gene_hgnc_id": 25570,
"hgvs_c": "c.1601C>G",
"hgvs_p": "p.Thr534Arg",
"transcript": "ENST00000885072.1",
"protein_id": "ENSP00000555131.1",
"transcript_support_level": null,
"aa_start": 534,
"aa_end": null,
"aa_length": 589,
"cds_start": 1601,
"cds_end": null,
"cds_length": 1770,
"cdna_start": 1618,
"cdna_end": null,
"cdna_length": 2343,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000885072.1"
},
{
"aa_ref": "T",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 14,
"exon_rank_end": null,
"exon_count": 16,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DNAJC11",
"gene_hgnc_id": 25570,
"hgvs_c": "c.1571C>G",
"hgvs_p": "p.Thr524Arg",
"transcript": "ENST00000954225.1",
"protein_id": "ENSP00000624284.1",
"transcript_support_level": null,
"aa_start": 524,
"aa_end": null,
"aa_length": 579,
"cds_start": 1571,
"cds_end": null,
"cds_length": 1740,
"cdna_start": 1590,
"cdna_end": null,
"cdna_length": 3263,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000954225.1"
},
{
"aa_ref": "T",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 14,
"exon_rank_end": null,
"exon_count": 16,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DNAJC11",
"gene_hgnc_id": 25570,
"hgvs_c": "c.1553C>G",
"hgvs_p": "p.Thr518Arg",
"transcript": "ENST00000885069.1",
"protein_id": "ENSP00000555128.1",
"transcript_support_level": null,
"aa_start": 518,
"aa_end": null,
"aa_length": 573,
"cds_start": 1553,
"cds_end": null,
"cds_length": 1722,
"cdna_start": 1567,
"cdna_end": null,
"cdna_length": 3241,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000885069.1"
},
{
"aa_ref": "T",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 14,
"exon_rank_end": null,
"exon_count": 16,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DNAJC11",
"gene_hgnc_id": 25570,
"hgvs_c": "c.1544C>G",
"hgvs_p": "p.Thr515Arg",
"transcript": "ENST00000885068.1",
"protein_id": "ENSP00000555127.1",
"transcript_support_level": null,
"aa_start": 515,
"aa_end": null,
"aa_length": 570,
"cds_start": 1544,
"cds_end": null,
"cds_length": 1713,
"cdna_start": 1566,
"cdna_end": null,
"cdna_length": 3234,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000885068.1"
},
{
"aa_ref": "T",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 13,
"exon_rank_end": null,
"exon_count": 15,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DNAJC11",
"gene_hgnc_id": 25570,
"hgvs_c": "c.1409C>G",
"hgvs_p": "p.Thr470Arg",
"transcript": "ENST00000885070.1",
"protein_id": "ENSP00000555129.1",
"transcript_support_level": null,
"aa_start": 470,
"aa_end": null,
"aa_length": 525,
"cds_start": 1409,
"cds_end": null,
"cds_length": 1578,
"cdna_start": 1415,
"cdna_end": null,
"cdna_length": 3089,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000885070.1"
},
{
"aa_ref": "T",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 13,
"exon_rank_end": null,
"exon_count": 15,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DNAJC11",
"gene_hgnc_id": 25570,
"hgvs_c": "c.1388C>G",
"hgvs_p": "p.Thr463Arg",
"transcript": "ENST00000885071.1",
"protein_id": "ENSP00000555130.1",
"transcript_support_level": null,
"aa_start": 463,
"aa_end": null,
"aa_length": 518,
"cds_start": 1388,
"cds_end": null,
"cds_length": 1557,
"cdna_start": 1392,
"cdna_end": null,
"cdna_length": 3068,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000885071.1"
},
{
"aa_ref": "T",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 12,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DNAJC11",
"gene_hgnc_id": 25570,
"hgvs_c": "c.1307C>G",
"hgvs_p": "p.Thr436Arg",
"transcript": "ENST00000954226.1",
"protein_id": "ENSP00000624285.1",
"transcript_support_level": null,
"aa_start": 436,
"aa_end": null,
"aa_length": 491,
"cds_start": 1307,
"cds_end": null,
"cds_length": 1476,
"cdna_start": 1313,
"cdna_end": null,
"cdna_length": 2986,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000954226.1"
},
{
"aa_ref": "T",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 12,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DNAJC11",
"gene_hgnc_id": 25570,
"hgvs_c": "c.1286C>G",
"hgvs_p": "p.Thr429Arg",
"transcript": "ENST00000939001.1",
"protein_id": "ENSP00000609060.1",
"transcript_support_level": null,
"aa_start": 429,
"aa_end": null,
"aa_length": 484,
"cds_start": 1286,
"cds_end": null,
"cds_length": 1455,
"cdna_start": 1305,
"cdna_end": null,
"cdna_length": 2980,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000939001.1"
},
{
"aa_ref": "T",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 12,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DNAJC11",
"gene_hgnc_id": 25570,
"hgvs_c": "c.1259C>G",
"hgvs_p": "p.Thr420Arg",
"transcript": "ENST00000939002.1",
"protein_id": "ENSP00000609061.1",
"transcript_support_level": null,
"aa_start": 420,
"aa_end": null,
"aa_length": 475,
"cds_start": 1259,
"cds_end": null,
"cds_length": 1428,
"cdna_start": 1277,
"cdna_end": null,
"cdna_length": 2951,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000939002.1"
},
{
"aa_ref": "T",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 12,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DNAJC11",
"gene_hgnc_id": 25570,
"hgvs_c": "c.1232C>G",
"hgvs_p": "p.Thr411Arg",
"transcript": "ENST00000939003.1",
"protein_id": "ENSP00000609062.1",
"transcript_support_level": null,
"aa_start": 411,
"aa_end": null,
"aa_length": 466,
"cds_start": 1232,
"cds_end": null,
"cds_length": 1401,
"cdna_start": 1251,
"cdna_end": null,
"cdna_length": 2924,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000939003.1"
},
{
"aa_ref": "T",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 11,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DNAJC11",
"gene_hgnc_id": 25570,
"hgvs_c": "c.1157C>G",
"hgvs_p": "p.Thr386Arg",
"transcript": "ENST00000885067.1",
"protein_id": "ENSP00000555126.1",
"transcript_support_level": null,
"aa_start": 386,
"aa_end": null,
"aa_length": 441,
"cds_start": 1157,
"cds_end": null,
"cds_length": 1326,
"cdna_start": 1176,
"cdna_end": null,
"cdna_length": 2850,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000885067.1"
},
{
"aa_ref": "T",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 12,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DNAJC11",
"gene_hgnc_id": 25570,
"hgvs_c": "c.1241C>G",
"hgvs_p": "p.Thr414Arg",
"transcript": "XM_047424842.1",
"protein_id": "XP_047280798.1",
"transcript_support_level": null,
"aa_start": 414,
"aa_end": null,
"aa_length": 469,
"cds_start": 1241,
"cds_end": null,
"cds_length": 1410,
"cdna_start": 1365,
"cdna_end": null,
"cdna_length": 3039,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "XM_047424842.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"non_coding_transcript_exon_variant"
],
"exon_rank": 6,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DNAJC11",
"gene_hgnc_id": 25570,
"hgvs_c": "n.815C>G",
"hgvs_p": null,
"transcript": "ENST00000465508.6",
"protein_id": null,
"transcript_support_level": 2,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": null,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 2448,
"mane_select": null,
"mane_plus": null,
"biotype": "pseudogene",
"feature": "ENST00000465508.6"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"non_coding_transcript_exon_variant"
],
"exon_rank": 13,
"exon_rank_end": null,
"exon_count": 15,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DNAJC11",
"gene_hgnc_id": 25570,
"hgvs_c": "n.2190C>G",
"hgvs_p": null,
"transcript": "ENST00000472414.2",
"protein_id": null,
"transcript_support_level": 3,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": null,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 3850,
"mane_select": null,
"mane_plus": null,
"biotype": "retained_intron",
"feature": "ENST00000472414.2"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"non_coding_transcript_exon_variant"
],
"exon_rank": 13,
"exon_rank_end": null,
"exon_count": 15,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DNAJC11",
"gene_hgnc_id": 25570,
"hgvs_c": "n.*1255C>G",
"hgvs_p": null,
"transcript": "ENST00000685129.1",
"protein_id": "ENSP00000509149.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": null,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 3555,
"mane_select": null,
"mane_plus": null,
"biotype": "nonsense_mediated_decay",
"feature": "ENST00000685129.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"non_coding_transcript_exon_variant"
],
"exon_rank": 6,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DNAJC11",
"gene_hgnc_id": 25570,
"hgvs_c": "n.2575C>G",
"hgvs_p": null,
"transcript": "ENST00000685360.1",
"protein_id": null,
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": null,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 4233,
"mane_select": null,
"mane_plus": null,
"biotype": "retained_intron",
"feature": "ENST00000685360.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"non_coding_transcript_exon_variant"
],
"exon_rank": 14,
"exon_rank_end": null,
"exon_count": 16,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DNAJC11",
"gene_hgnc_id": 25570,
"hgvs_c": "n.*1898C>G",
"hgvs_p": null,
"transcript": "ENST00000686243.1",
"protein_id": "ENSP00000509108.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": null,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 3712,
"mane_select": null,
"mane_plus": null,
"biotype": "nonsense_mediated_decay",
"feature": "ENST00000686243.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"non_coding_transcript_exon_variant"
],
"exon_rank": 13,
"exon_rank_end": null,
"exon_count": 15,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "DNAJC11",
"gene_hgnc_id": 25570,
"hgvs_c": "n.*1642C>G",
"hgvs_p": null,
"transcript": "ENST00000688524.1",
"protein_id": "ENSP00000508956.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": null,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 3552,
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"custom_annotations": null
}
],
"message": null
}