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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 10-102425162-TG-GA (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=10&pos=102425162&ref=TG&alt=GA&genome=hg38&allGenes=true"API Response
json
{
"message": null,
"variants": [
{
"acmg_by_gene": [
{
"benign_score": 0,
"criteria": [],
"effects": [
"missense_variant"
],
"gene_symbol": "CUEDC2",
"hgnc_id": 28352,
"hgvs_c": "c.26_27delCAinsTC",
"hgvs_p": "p.Ala9Val",
"inheritance_mode": "AR",
"pathogenic_score": 0,
"score": 0,
"transcript": "NM_024040.3",
"verdict": "Uncertain_significance"
}
],
"acmg_classification": "Uncertain_significance",
"acmg_criteria": "",
"acmg_score": 0,
"allele_count_reference_population": 0,
"alphamissense_prediction": null,
"alphamissense_score": null,
"alt": "GA",
"apogee2_prediction": null,
"apogee2_score": null,
"bayesdelnoaf_prediction": null,
"bayesdelnoaf_score": null,
"chr": "10",
"clinvar_classification": "",
"clinvar_disease": "",
"clinvar_review_status": "",
"clinvar_submissions_summary": "",
"computational_prediction_selected": null,
"computational_score_selected": null,
"computational_source_selected": null,
"consequences": [
{
"aa_alt": "V",
"aa_end": null,
"aa_length": 287,
"aa_ref": "A",
"aa_start": 9,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 1100,
"cdna_start": 86,
"cds_end": null,
"cds_length": 864,
"cds_start": 26,
"consequences": [
"missense_variant"
],
"exon_count": 9,
"exon_rank": null,
"exon_rank_end": null,
"feature": "NM_024040.3",
"gene_hgnc_id": 28352,
"gene_symbol": "CUEDC2",
"hgvs_c": "c.26_27delCAinsTC",
"hgvs_p": "p.Ala9Val",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": "ENST00000369937.5",
"protein_coding": true,
"protein_id": "NP_076945.2",
"strand": false,
"transcript": "NM_024040.3",
"transcript_support_level": null
},
{
"aa_alt": "V",
"aa_end": null,
"aa_length": 287,
"aa_ref": "A",
"aa_start": 9,
"biotype": "protein_coding",
"canonical": true,
"cdna_end": null,
"cdna_length": 1100,
"cdna_start": 86,
"cds_end": null,
"cds_length": 864,
"cds_start": 26,
"consequences": [
"missense_variant"
],
"exon_count": 9,
"exon_rank": null,
"exon_rank_end": null,
"feature": "ENST00000369937.5",
"gene_hgnc_id": 28352,
"gene_symbol": "CUEDC2",
"hgvs_c": "c.26_27delCAinsTC",
"hgvs_p": "p.Ala9Val",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": "NM_024040.3",
"protein_coding": true,
"protein_id": "ENSP00000358953.4",
"strand": false,
"transcript": "ENST00000369937.5",
"transcript_support_level": 1
},
{
"aa_alt": "V",
"aa_end": null,
"aa_length": 289,
"aa_ref": "A",
"aa_start": 9,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 1122,
"cdna_start": 102,
"cds_end": null,
"cds_length": 870,
"cds_start": 26,
"consequences": [
"missense_variant"
],
"exon_count": 9,
"exon_rank": null,
"exon_rank_end": null,
"feature": "ENST00000888785.1",
"gene_hgnc_id": 28352,
"gene_symbol": "CUEDC2",
"hgvs_c": "c.26_27delCAinsTC",
"hgvs_p": "p.Ala9Val",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000558844.1",
"strand": false,
"transcript": "ENST00000888785.1",
"transcript_support_level": null
},
{
"aa_alt": "V",
"aa_end": null,
"aa_length": 289,
"aa_ref": "A",
"aa_start": 9,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 1130,
"cdna_start": 110,
"cds_end": null,
"cds_length": 870,
"cds_start": 26,
"consequences": [
"missense_variant"
],
"exon_count": 9,
"exon_rank": null,
"exon_rank_end": null,
"feature": "ENST00000925790.1",
"gene_hgnc_id": 28352,
"gene_symbol": "CUEDC2",
"hgvs_c": "c.26_27delCAinsTC",
"hgvs_p": "p.Ala9Val",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000595849.1",
"strand": false,
"transcript": "ENST00000925790.1",
"transcript_support_level": null
},
{
"aa_alt": "V",
"aa_end": null,
"aa_length": 289,
"aa_ref": "A",
"aa_start": 9,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 1106,
"cdna_start": 86,
"cds_end": null,
"cds_length": 870,
"cds_start": 26,
"consequences": [
"missense_variant"
],
"exon_count": 9,
"exon_rank": null,
"exon_rank_end": null,
"feature": "ENST00000925792.1",
"gene_hgnc_id": 28352,
"gene_symbol": "CUEDC2",
"hgvs_c": "c.26_27delCAinsTC",
"hgvs_p": "p.Ala9Val",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000595851.1",
"strand": false,
"transcript": "ENST00000925792.1",
"transcript_support_level": null
},
{
"aa_alt": "V",
"aa_end": null,
"aa_length": 287,
"aa_ref": "A",
"aa_start": 9,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 1248,
"cdna_start": 227,
"cds_end": null,
"cds_length": 864,
"cds_start": 26,
"consequences": [
"missense_variant"
],
"exon_count": 9,
"exon_rank": null,
"exon_rank_end": null,
"feature": "ENST00000888778.1",
"gene_hgnc_id": 28352,
"gene_symbol": "CUEDC2",
"hgvs_c": "c.26_27delCAinsTC",
"hgvs_p": "p.Ala9Val",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000558837.1",
"strand": false,
"transcript": "ENST00000888778.1",
"transcript_support_level": null
},
{
"aa_alt": "V",
"aa_end": null,
"aa_length": 287,
"aa_ref": "A",
"aa_start": 9,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 1198,
"cdna_start": 184,
"cds_end": null,
"cds_length": 864,
"cds_start": 26,
"consequences": [
"missense_variant"
],
"exon_count": 9,
"exon_rank": null,
"exon_rank_end": null,
"feature": "ENST00000888779.1",
"gene_hgnc_id": 28352,
"gene_symbol": "CUEDC2",
"hgvs_c": "c.26_27delCAinsTC",
"hgvs_p": "p.Ala9Val",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000558838.1",
"strand": false,
"transcript": "ENST00000888779.1",
"transcript_support_level": null
},
{
"aa_alt": "V",
"aa_end": null,
"aa_length": 287,
"aa_ref": "A",
"aa_start": 9,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 1361,
"cdna_start": 347,
"cds_end": null,
"cds_length": 864,
"cds_start": 26,
"consequences": [
"missense_variant"
],
"exon_count": 9,
"exon_rank": null,
"exon_rank_end": null,
"feature": "ENST00000888780.1",
"gene_hgnc_id": 28352,
"gene_symbol": "CUEDC2",
"hgvs_c": "c.26_27delCAinsTC",
"hgvs_p": "p.Ala9Val",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000558839.1",
"strand": false,
"transcript": "ENST00000888780.1",
"transcript_support_level": null
},
{
"aa_alt": "V",
"aa_end": null,
"aa_length": 287,
"aa_ref": "A",
"aa_start": 9,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 1177,
"cdna_start": 165,
"cds_end": null,
"cds_length": 864,
"cds_start": 26,
"consequences": [
"missense_variant"
],
"exon_count": 10,
"exon_rank": null,
"exon_rank_end": null,
"feature": "ENST00000888781.1",
"gene_hgnc_id": 28352,
"gene_symbol": "CUEDC2",
"hgvs_c": "c.26_27delCAinsTC",
"hgvs_p": "p.Ala9Val",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000558840.1",
"strand": false,
"transcript": "ENST00000888781.1",
"transcript_support_level": null
},
{
"aa_alt": "V",
"aa_end": null,
"aa_length": 287,
"aa_ref": "A",
"aa_start": 9,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 1265,
"cdna_start": 247,
"cds_end": null,
"cds_length": 864,
"cds_start": 26,
"consequences": [
"missense_variant"
],
"exon_count": 10,
"exon_rank": null,
"exon_rank_end": null,
"feature": "ENST00000888783.1",
"gene_hgnc_id": 28352,
"gene_symbol": "CUEDC2",
"hgvs_c": "c.26_27delCAinsTC",
"hgvs_p": "p.Ala9Val",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000558842.1",
"strand": false,
"transcript": "ENST00000888783.1",
"transcript_support_level": null
},
{
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"aa_length": 287,
"aa_ref": "A",
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"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 1290,
"cdna_start": 276,
"cds_end": null,
"cds_length": 864,
"cds_start": 26,
"consequences": [
"missense_variant"
],
"exon_count": 9,
"exon_rank": null,
"exon_rank_end": null,
"feature": "ENST00000925786.1",
"gene_hgnc_id": 28352,
"gene_symbol": "CUEDC2",
"hgvs_c": "c.26_27delCAinsTC",
"hgvs_p": "p.Ala9Val",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000595845.1",
"strand": false,
"transcript": "ENST00000925786.1",
"transcript_support_level": null
},
{
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"aa_end": null,
"aa_length": 287,
"aa_ref": "A",
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"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 1260,
"cdna_start": 246,
"cds_end": null,
"cds_length": 864,
"cds_start": 26,
"consequences": [
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],
"exon_count": 9,
"exon_rank": null,
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"feature": "ENST00000925787.1",
"gene_hgnc_id": 28352,
"gene_symbol": "CUEDC2",
"hgvs_c": "c.26_27delCAinsTC",
"hgvs_p": "p.Ala9Val",
"intron_rank": null,
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"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000595846.1",
"strand": false,
"transcript": "ENST00000925787.1",
"transcript_support_level": null
},
{
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"aa_ref": "A",
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"biotype": "protein_coding",
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"cdna_start": 108,
"cds_end": null,
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"consequences": [
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],
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"exon_rank": null,
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"feature": "ENST00000925788.1",
"gene_hgnc_id": 28352,
"gene_symbol": "CUEDC2",
"hgvs_c": "c.26_27delCAinsTC",
"hgvs_p": "p.Ala9Val",
"intron_rank": null,
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"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000595847.1",
"strand": false,
"transcript": "ENST00000925788.1",
"transcript_support_level": null
},
{
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"aa_length": 287,
"aa_ref": "A",
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"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 1157,
"cdna_start": 143,
"cds_end": null,
"cds_length": 864,
"cds_start": 26,
"consequences": [
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],
"exon_count": 9,
"exon_rank": null,
"exon_rank_end": null,
"feature": "ENST00000925793.1",
"gene_hgnc_id": 28352,
"gene_symbol": "CUEDC2",
"hgvs_c": "c.26_27delCAinsTC",
"hgvs_p": "p.Ala9Val",
"intron_rank": null,
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"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000595852.1",
"strand": false,
"transcript": "ENST00000925793.1",
"transcript_support_level": null
},
{
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"aa_length": 287,
"aa_ref": "A",
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"biotype": "protein_coding",
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"cdna_end": null,
"cdna_length": 1234,
"cdna_start": 217,
"cds_end": null,
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"consequences": [
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],
"exon_count": 9,
"exon_rank": null,
"exon_rank_end": null,
"feature": "ENST00000925794.1",
"gene_hgnc_id": 28352,
"gene_symbol": "CUEDC2",
"hgvs_c": "c.26_27delCAinsTC",
"hgvs_p": "p.Ala9Val",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000595853.1",
"strand": false,
"transcript": "ENST00000925794.1",
"transcript_support_level": null
},
{
"aa_alt": "V",
"aa_end": null,
"aa_length": 287,
"aa_ref": "A",
"aa_start": 9,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 1257,
"cdna_start": 245,
"cds_end": null,
"cds_length": 864,
"cds_start": 26,
"consequences": [
"missense_variant"
],
"exon_count": 10,
"exon_rank": null,
"exon_rank_end": null,
"feature": "ENST00000941433.1",
"gene_hgnc_id": 28352,
"gene_symbol": "CUEDC2",
"hgvs_c": "c.26_27delCAinsTC",
"hgvs_p": "p.Ala9Val",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000611492.1",
"strand": false,
"transcript": "ENST00000941433.1",
"transcript_support_level": null
},
{
"aa_alt": "V",
"aa_end": null,
"aa_length": 275,
"aa_ref": "A",
"aa_start": 9,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 1086,
"cdna_start": 104,
"cds_end": null,
"cds_length": 828,
"cds_start": 26,
"consequences": [
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],
"exon_count": 9,
"exon_rank": null,
"exon_rank_end": null,
"feature": "ENST00000941431.1",
"gene_hgnc_id": 28352,
"gene_symbol": "CUEDC2",
"hgvs_c": "c.26_27delCAinsTC",
"hgvs_p": "p.Ala9Val",
"intron_rank": null,
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"mane_plus": null,
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"protein_coding": true,
"protein_id": "ENSP00000611490.1",
"strand": false,
"transcript": "ENST00000941431.1",
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},
{
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"aa_length": 269,
"aa_ref": "A",
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"cdna_length": 1062,
"cdna_start": 99,
"cds_end": null,
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"cds_start": 26,
"consequences": [
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],
"exon_count": 9,
"exon_rank": null,
"exon_rank_end": null,
"feature": "ENST00000888784.1",
"gene_hgnc_id": 28352,
"gene_symbol": "CUEDC2",
"hgvs_c": "c.26_27delCAinsTC",
"hgvs_p": "p.Ala9Val",
"intron_rank": null,
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"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000558843.1",
"strand": false,
"transcript": "ENST00000888784.1",
"transcript_support_level": null
},
{
"aa_alt": "V",
"aa_end": null,
"aa_length": 262,
"aa_ref": "A",
"aa_start": 9,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 1023,
"cdna_start": 86,
"cds_end": null,
"cds_length": 789,
"cds_start": 26,
"consequences": [
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],
"exon_count": 9,
"exon_rank": null,
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"feature": "ENST00000941432.1",
"gene_hgnc_id": 28352,
"gene_symbol": "CUEDC2",
"hgvs_c": "c.26_27delCAinsTC",
"hgvs_p": "p.Ala9Val",
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"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000611491.1",
"strand": false,
"transcript": "ENST00000941432.1",
"transcript_support_level": null
},
{
"aa_alt": "V",
"aa_end": null,
"aa_length": 261,
"aa_ref": "A",
"aa_start": 9,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 1051,
"cdna_start": 117,
"cds_end": null,
"cds_length": 786,
"cds_start": 26,
"consequences": [
"missense_variant"
],
"exon_count": 9,
"exon_rank": null,
"exon_rank_end": null,
"feature": "ENST00000888782.1",
"gene_hgnc_id": 28352,
"gene_symbol": "CUEDC2",
"hgvs_c": "c.26_27delCAinsTC",
"hgvs_p": "p.Ala9Val",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000558841.1",
"strand": false,
"transcript": "ENST00000888782.1",
"transcript_support_level": null
},
{
"aa_alt": "V",
"aa_end": null,
"aa_length": 226,
"aa_ref": "A",
"aa_start": 9,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 948,
"cdna_start": 113,
"cds_end": null,
"cds_length": 681,
"cds_start": 26,
"consequences": [
"missense_variant"
],
"exon_count": 8,
"exon_rank": null,
"exon_rank_end": null,
"feature": "ENST00000925789.1",
"gene_hgnc_id": 28352,
"gene_symbol": "CUEDC2",
"hgvs_c": "c.26_27delCAinsTC",
"hgvs_p": "p.Ala9Val",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
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