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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 10-73837531-T-A (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=10&pos=73837531&ref=T&alt=A&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "10",
"pos": 73837531,
"ref": "T",
"alt": "A",
"effect": "intron_variant",
"transcript": "ENST00000423381.6",
"consequences": [
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 23,
"intron_rank": 13,
"intron_rank_end": null,
"gene_symbol": "CAMK2G",
"gene_hgnc_id": 1463,
"hgvs_c": "c.1010-20A>T",
"hgvs_p": null,
"transcript": "NM_001367534.1",
"protein_id": "NP_001354463.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 588,
"cds_start": -4,
"cds_end": null,
"cds_length": 1767,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 3878,
"mane_select": "ENST00000423381.6",
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": true,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 23,
"intron_rank": 13,
"intron_rank_end": null,
"gene_symbol": "CAMK2G",
"gene_hgnc_id": 1463,
"hgvs_c": "c.1010-20A>T",
"hgvs_p": null,
"transcript": "ENST00000423381.6",
"protein_id": "ENSP00000410298.3",
"transcript_support_level": 5,
"aa_start": null,
"aa_end": null,
"aa_length": 588,
"cds_start": -4,
"cds_end": null,
"cds_length": 1767,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 3878,
"mane_select": "NM_001367534.1",
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 21,
"intron_rank": 13,
"intron_rank_end": null,
"gene_symbol": "CAMK2G",
"gene_hgnc_id": 1463,
"hgvs_c": "c.1010-20A>T",
"hgvs_p": null,
"transcript": "ENST00000322635.7",
"protein_id": "ENSP00000315599.3",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 527,
"cds_start": -4,
"cds_end": null,
"cds_length": 1584,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 3720,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 18,
"intron_rank": 10,
"intron_rank_end": null,
"gene_symbol": "CAMK2G",
"gene_hgnc_id": 1463,
"hgvs_c": "c.752-20A>T",
"hgvs_p": null,
"transcript": "ENST00000433289.5",
"protein_id": "ENSP00000393784.1",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 453,
"cds_start": -4,
"cds_end": null,
"cds_length": 1362,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 1618,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 21,
"intron_rank": 13,
"intron_rank_end": null,
"gene_symbol": "CAMK2G",
"gene_hgnc_id": 1463,
"hgvs_c": "c.257-20A>T",
"hgvs_p": null,
"transcript": "ENST00000394762.7",
"protein_id": "ENSP00000378243.4",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 288,
"cds_start": -4,
"cds_end": null,
"cds_length": 867,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 1893,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 9,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "CAMK2G",
"gene_hgnc_id": 1463,
"hgvs_c": "n.44-20A>T",
"hgvs_p": null,
"transcript": "ENST00000474131.5",
"protein_id": "ENSP00000514975.1",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": -4,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 512,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 20,
"intron_rank": 13,
"intron_rank_end": null,
"gene_symbol": "CAMK2G",
"gene_hgnc_id": 1463,
"hgvs_c": "c.1010-20A>T",
"hgvs_p": null,
"transcript": "NM_001320898.2",
"protein_id": "NP_001307827.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 592,
"cds_start": -4,
"cds_end": null,
"cds_length": 1779,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 2715,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": 13,
"intron_rank_end": null,
"gene_symbol": "CAMK2G",
"gene_hgnc_id": 1463,
"hgvs_c": "c.1010-20A>T",
"hgvs_p": null,
"transcript": "ENST00000441192.2",
"protein_id": "ENSP00000405561.2",
"transcript_support_level": 5,
"aa_start": null,
"aa_end": null,
"aa_length": 588,
"cds_start": -4,
"cds_end": null,
"cds_length": 1767,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 2423,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": 13,
"intron_rank_end": null,
"gene_symbol": "CAMK2G",
"gene_hgnc_id": 1463,
"hgvs_c": "c.1010-20A>T",
"hgvs_p": null,
"transcript": "NM_001367544.1",
"protein_id": "NP_001354473.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 577,
"cds_start": -4,
"cds_end": null,
"cds_length": 1734,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 3845,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 19,
"intron_rank": 12,
"intron_rank_end": null,
"gene_symbol": "CAMK2G",
"gene_hgnc_id": 1463,
"hgvs_c": "c.923-20A>T",
"hgvs_p": null,
"transcript": "NM_001367514.1",
"protein_id": "NP_001354443.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 575,
"cds_start": -4,
"cds_end": null,
"cds_length": 1728,
"cdna_start": null,
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"cdna_length": 2664,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 23,
"intron_rank": 13,
"intron_rank_end": null,
"gene_symbol": "CAMK2G",
"gene_hgnc_id": 1463,
"hgvs_c": "c.1010-20A>T",
"hgvs_p": null,
"transcript": "NM_001367548.1",
"protein_id": "NP_001354477.1",
"transcript_support_level": null,
"aa_start": null,
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"cds_start": -4,
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},
{
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"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 19,
"intron_rank": 12,
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"gene_symbol": "CAMK2G",
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"hgvs_c": "c.947-20A>T",
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"transcript": "NM_001367522.1",
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},
{
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"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 19,
"intron_rank": 12,
"intron_rank_end": null,
"gene_symbol": "CAMK2G",
"gene_hgnc_id": 1463,
"hgvs_c": "c.947-20A>T",
"hgvs_p": null,
"transcript": "NM_001367520.1",
"protein_id": "NP_001354449.1",
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},
{
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"strand": false,
"consequences": [
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],
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"exon_count": 19,
"intron_rank": 13,
"intron_rank_end": null,
"gene_symbol": "CAMK2G",
"gene_hgnc_id": 1463,
"hgvs_c": "c.1010-20A>T",
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"transcript": "NM_001367521.1",
"protein_id": "NP_001354450.1",
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},
{
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"strand": false,
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],
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"intron_rank": 13,
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"gene_symbol": "CAMK2G",
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"hgvs_c": "c.1010-20A>T",
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"transcript": "NM_001367546.1",
"protein_id": "NP_001354475.1",
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},
{
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"consequences": [
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],
"exon_rank": null,
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"gene_symbol": "CAMK2G",
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"hgvs_c": "c.947-20A>T",
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"transcript": "NM_001367547.1",
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},
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],
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"gene_symbol": "CAMK2G",
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"hgvs_c": "c.947-20A>T",
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"transcript": "NM_001367528.1",
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},
{
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],
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"intron_rank": 12,
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"gene_symbol": "CAMK2G",
"gene_hgnc_id": 1463,
"hgvs_c": "c.947-20A>T",
"hgvs_p": null,
"transcript": "NM_172171.3",
"protein_id": "NP_751911.1",
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},
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"consequences": [
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],
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"gene_symbol": "CAMK2G",
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"hgvs_c": "c.947-20A>T",
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"transcript": "ENST00000322680.7",
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],
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"gene_symbol": "CAMK2G",
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},
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],
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},
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"strand": false,
"consequences": [
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],
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"intron_rank": 13,
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"gene_symbol": "CAMK2G",
"gene_hgnc_id": 1463,
"hgvs_c": "c.1010-20A>T",
"hgvs_p": null,
"transcript": "NM_001367543.1",
"protein_id": "NP_001354472.1",
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"cds_start": -4,
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},
{
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"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 21,
"intron_rank": 12,
"intron_rank_end": null,
"gene_symbol": "CAMK2G",
"gene_hgnc_id": 1463,
"hgvs_c": "c.923-20A>T",
"hgvs_p": null,
"transcript": "NM_001367525.1",
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}
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}