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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 10-95524605-C-G (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=10&pos=95524605&ref=C&alt=G&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "10",
"pos": 95524605,
"ref": "C",
"alt": "G",
"effect": "intron_variant",
"transcript": "ENST00000371247.7",
"consequences": [
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 33,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "SORBS1",
"gene_hgnc_id": 14565,
"hgvs_c": "c.-131-33485G>C",
"hgvs_p": null,
"transcript": "NM_001034954.3",
"protein_id": "NP_001030126.2",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1292,
"cds_start": -4,
"cds_end": null,
"cds_length": 3879,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 7348,
"mane_select": "ENST00000371247.7",
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": true,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 33,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "SORBS1",
"gene_hgnc_id": 14565,
"hgvs_c": "c.-131-33485G>C",
"hgvs_p": null,
"transcript": "ENST00000371247.7",
"protein_id": "ENSP00000360293.2",
"transcript_support_level": 5,
"aa_start": null,
"aa_end": null,
"aa_length": 1292,
"cds_start": -4,
"cds_end": null,
"cds_length": 3879,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 7348,
"mane_select": "NM_001034954.3",
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 32,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "SORBS1",
"gene_hgnc_id": 14565,
"hgvs_c": "c.-131-33485G>C",
"hgvs_p": null,
"transcript": "ENST00000371227.8",
"protein_id": "ENSP00000360271.3",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 1266,
"cds_start": -4,
"cds_end": null,
"cds_length": 3801,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 7279,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 25,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "SORBS1",
"gene_hgnc_id": 14565,
"hgvs_c": "c.-131-33485G>C",
"hgvs_p": null,
"transcript": "ENST00000371249.6",
"protein_id": "ENSP00000360295.2",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 816,
"cds_start": -4,
"cds_end": null,
"cds_length": 2451,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 5927,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 26,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "SORBS1",
"gene_hgnc_id": 14565,
"hgvs_c": "c.-131-33485G>C",
"hgvs_p": null,
"transcript": "ENST00000306402.10",
"protein_id": "ENSP00000302556.6",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 781,
"cds_start": -4,
"cds_end": null,
"cds_length": 2346,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 5858,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 30,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "SORBS1",
"gene_hgnc_id": 14565,
"hgvs_c": "c.-131-33485G>C",
"hgvs_p": null,
"transcript": "NM_001384452.1",
"protein_id": "NP_001371381.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1628,
"cds_start": -4,
"cds_end": null,
"cds_length": 4887,
"cdna_start": null,
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"cdna_length": 8356,
"mane_select": null,
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"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 29,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "SORBS1",
"gene_hgnc_id": 14565,
"hgvs_c": "c.-131-33485G>C",
"hgvs_p": null,
"transcript": "NM_001384448.1",
"protein_id": "NP_001371377.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1619,
"cds_start": -4,
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"cdna_start": null,
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"cdna_length": 8329,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 29,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "SORBS1",
"gene_hgnc_id": 14565,
"hgvs_c": "c.-131-33485G>C",
"hgvs_p": null,
"transcript": "ENST00000649575.2",
"protein_id": "ENSP00000497106.2",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1619,
"cds_start": -4,
"cds_end": null,
"cds_length": 4860,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 7022,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 29,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "SORBS1",
"gene_hgnc_id": 14565,
"hgvs_c": "c.-131-33485G>C",
"hgvs_p": null,
"transcript": "NM_001384447.1",
"protein_id": "NP_001371376.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1606,
"cds_start": -4,
"cds_end": null,
"cds_length": 4821,
"cdna_start": null,
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"mane_select": null,
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"feature": null
},
{
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"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 30,
"intron_rank": 1,
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"gene_symbol": "SORBS1",
"gene_hgnc_id": 14565,
"hgvs_c": "c.-131-33485G>C",
"hgvs_p": null,
"transcript": "NM_001384449.1",
"protein_id": "NP_001371378.1",
"transcript_support_level": null,
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"feature": null
},
{
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"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 29,
"intron_rank": 1,
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"gene_symbol": "SORBS1",
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"hgvs_c": "c.-131-33485G>C",
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"transcript": "NM_001384450.1",
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},
{
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],
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},
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],
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"gene_symbol": "SORBS1",
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"hgvs_c": "c.-253-31319G>C",
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},
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],
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"gene_symbol": "SORBS1",
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],
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"transcript": "NM_001384451.1",
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},
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],
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],
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"gene_symbol": "SORBS1",
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},
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],
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