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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 11-118618067-A-C (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=11&pos=118618067&ref=A&alt=C&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "11",
"pos": 118618067,
"ref": "A",
"alt": "C",
"effect": "intron_variant",
"transcript": "NM_015157.4",
"consequences": [
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 23,
"intron_rank": 4,
"intron_rank_end": null,
"gene_symbol": "PHLDB1",
"gene_hgnc_id": 23697,
"hgvs_c": "c.355+1856A>C",
"hgvs_p": null,
"transcript": "NM_001144758.3",
"protein_id": "NP_001138230.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1377,
"cds_start": null,
"cds_end": null,
"cds_length": 4134,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "ENST00000600882.6",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001144758.3"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": true,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 23,
"intron_rank": 4,
"intron_rank_end": null,
"gene_symbol": "PHLDB1",
"gene_hgnc_id": 23697,
"hgvs_c": "c.355+1856A>C",
"hgvs_p": null,
"transcript": "ENST00000600882.6",
"protein_id": "ENSP00000469820.1",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 1377,
"cds_start": null,
"cds_end": null,
"cds_length": 4134,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "NM_001144758.3",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000600882.6"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 24,
"intron_rank": 5,
"intron_rank_end": null,
"gene_symbol": "PHLDB1",
"gene_hgnc_id": 23697,
"hgvs_c": "c.355+1856A>C",
"hgvs_p": null,
"transcript": "ENST00000361417.6",
"protein_id": "ENSP00000354498.2",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 1377,
"cds_start": null,
"cds_end": null,
"cds_length": 4134,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000361417.6"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 25,
"intron_rank": 4,
"intron_rank_end": null,
"gene_symbol": "PHLDB1",
"gene_hgnc_id": 23697,
"hgvs_c": "c.355+1856A>C",
"hgvs_p": null,
"transcript": "ENST00000860962.1",
"protein_id": "ENSP00000531021.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1482,
"cds_start": null,
"cds_end": null,
"cds_length": 4449,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000860962.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 24,
"intron_rank": 4,
"intron_rank_end": null,
"gene_symbol": "PHLDB1",
"gene_hgnc_id": 23697,
"hgvs_c": "c.355+1856A>C",
"hgvs_p": null,
"transcript": "ENST00000860972.1",
"protein_id": "ENSP00000531031.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1471,
"cds_start": null,
"cds_end": null,
"cds_length": 4416,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000860972.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 24,
"intron_rank": 4,
"intron_rank_end": null,
"gene_symbol": "PHLDB1",
"gene_hgnc_id": 23697,
"hgvs_c": "c.355+1856A>C",
"hgvs_p": null,
"transcript": "ENST00000860971.1",
"protein_id": "ENSP00000531030.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1458,
"cds_start": null,
"cds_end": null,
"cds_length": 4377,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000860971.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 25,
"intron_rank": 5,
"intron_rank_end": null,
"gene_symbol": "PHLDB1",
"gene_hgnc_id": 23697,
"hgvs_c": "c.355+1856A>C",
"hgvs_p": null,
"transcript": "ENST00000860958.1",
"protein_id": "ENSP00000531017.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1434,
"cds_start": null,
"cds_end": null,
"cds_length": 4305,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000860958.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 24,
"intron_rank": 4,
"intron_rank_end": null,
"gene_symbol": "PHLDB1",
"gene_hgnc_id": 23697,
"hgvs_c": "c.355+1856A>C",
"hgvs_p": null,
"transcript": "ENST00000860961.1",
"protein_id": "ENSP00000531020.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1434,
"cds_start": null,
"cds_end": null,
"cds_length": 4305,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000860961.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 25,
"intron_rank": 5,
"intron_rank_end": null,
"gene_symbol": "PHLDB1",
"gene_hgnc_id": 23697,
"hgvs_c": "c.355+1856A>C",
"hgvs_p": null,
"transcript": "ENST00000860959.1",
"protein_id": "ENSP00000531018.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1433,
"cds_start": null,
"cds_end": null,
"cds_length": 4302,
"cdna_start": null,
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"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000860959.1"
},
{
"aa_ref": null,
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 24,
"intron_rank": 4,
"intron_rank_end": null,
"gene_symbol": "PHLDB1",
"gene_hgnc_id": 23697,
"hgvs_c": "c.355+1856A>C",
"hgvs_p": null,
"transcript": "ENST00000860974.1",
"protein_id": "ENSP00000531033.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1433,
"cds_start": null,
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"cds_length": 4302,
"cdna_start": null,
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"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000860974.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 25,
"intron_rank": 5,
"intron_rank_end": null,
"gene_symbol": "PHLDB1",
"gene_hgnc_id": 23697,
"hgvs_c": "c.355+1856A>C",
"hgvs_p": null,
"transcript": "ENST00000860984.1",
"protein_id": "ENSP00000531043.1",
"transcript_support_level": null,
"aa_start": null,
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"cds_start": null,
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"cdna_start": null,
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"feature": "ENST00000860984.1"
},
{
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"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 23,
"intron_rank": 4,
"intron_rank_end": null,
"gene_symbol": "PHLDB1",
"gene_hgnc_id": 23697,
"hgvs_c": "c.355+1856A>C",
"hgvs_p": null,
"transcript": "ENST00000860952.1",
"protein_id": "ENSP00000531011.1",
"transcript_support_level": null,
"aa_start": null,
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"cds_start": null,
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"mane_select": null,
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"biotype": "protein_coding",
"feature": "ENST00000860952.1"
},
{
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"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 24,
"intron_rank": 5,
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"gene_symbol": "PHLDB1",
"gene_hgnc_id": 23697,
"hgvs_c": "c.355+1856A>C",
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"transcript": "ENST00000860960.1",
"protein_id": "ENSP00000531019.1",
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"cdna_start": null,
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"mane_select": null,
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"biotype": "protein_coding",
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},
{
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"protein_coding": true,
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],
"exon_rank": null,
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"gene_symbol": "PHLDB1",
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"hgvs_c": "c.355+1856A>C",
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"biotype": "protein_coding",
"feature": "ENST00000860948.1"
},
{
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"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 24,
"intron_rank": 5,
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"gene_symbol": "PHLDB1",
"gene_hgnc_id": 23697,
"hgvs_c": "c.355+1856A>C",
"hgvs_p": null,
"transcript": "ENST00000860976.1",
"protein_id": "ENSP00000531035.1",
"transcript_support_level": null,
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"feature": "ENST00000860976.1"
},
{
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"strand": true,
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],
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"exon_count": 24,
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"gene_symbol": "PHLDB1",
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},
{
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"strand": true,
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],
"exon_rank": null,
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"exon_count": 25,
"intron_rank": 5,
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"gene_symbol": "PHLDB1",
"gene_hgnc_id": 23697,
"hgvs_c": "c.355+1856A>C",
"hgvs_p": null,
"transcript": "ENST00000860982.1",
"protein_id": "ENSP00000531041.1",
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"feature": "ENST00000860982.1"
},
{
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"protein_coding": true,
"strand": true,
"consequences": [
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],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 24,
"intron_rank": 4,
"intron_rank_end": null,
"gene_symbol": "PHLDB1",
"gene_hgnc_id": 23697,
"hgvs_c": "c.355+1856A>C",
"hgvs_p": null,
"transcript": "ENST00000860963.1",
"protein_id": "ENSP00000531022.1",
"transcript_support_level": null,
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},
{
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],
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"exon_count": 23,
"intron_rank": 4,
"intron_rank_end": null,
"gene_symbol": "PHLDB1",
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"hgvs_c": "c.355+1856A>C",
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},
{
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"strand": true,
"consequences": [
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],
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"intron_rank": 5,
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"gene_symbol": "PHLDB1",
"gene_hgnc_id": 23697,
"hgvs_c": "c.355+1856A>C",
"hgvs_p": null,
"transcript": "NM_015157.4",
"protein_id": "NP_055972.1",
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"feature": "NM_015157.4"
},
{
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"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
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"intron_rank": 4,
"intron_rank_end": null,
"gene_symbol": "PHLDB1",
"gene_hgnc_id": 23697,
"hgvs_c": "c.355+1856A>C",
"hgvs_p": null,
"transcript": "ENST00000860953.1",
"protein_id": "ENSP00000531012.1",
"transcript_support_level": null,
"aa_start": null,
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"cdna_start": null,
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"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000860953.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 24,
"intron_rank": 5,
"intron_rank_end": null,
"gene_symbol": "PHLDB1",
"gene_hgnc_id": 23697,
"hgvs_c": "c.355+1856A>C",
"hgvs_p": null,
"transcript": "ENST00000860966.1",
"protein_id": "ENSP00000531025.1",
"transcript_support_level": null,
"aa_start": null,
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"aa_length": 1377,
"cds_start": null,
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"cdna_start": null,
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"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000860966.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
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