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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 11-123605383-A-G (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=11&pos=123605383&ref=A&alt=G&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "11",
"pos": 123605383,
"ref": "A",
"alt": "G",
"effect": "missense_variant",
"transcript": "NM_001387024.1",
"consequences": [
{
"aa_ref": "I",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 10,
"exon_rank_end": null,
"exon_count": 20,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "GRAMD1B",
"gene_hgnc_id": 29214,
"hgvs_c": "c.1228A>G",
"hgvs_p": "p.Ile410Val",
"transcript": "NM_001387025.1",
"protein_id": "NP_001373954.1",
"transcript_support_level": null,
"aa_start": 410,
"aa_end": null,
"aa_length": 877,
"cds_start": 1228,
"cds_end": null,
"cds_length": 2634,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "ENST00000635736.2",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001387025.1"
},
{
"aa_ref": "I",
"aa_alt": "V",
"canonical": true,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 10,
"exon_rank_end": null,
"exon_count": 20,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "GRAMD1B",
"gene_hgnc_id": 29214,
"hgvs_c": "c.1228A>G",
"hgvs_p": "p.Ile410Val",
"transcript": "ENST00000635736.2",
"protein_id": "ENSP00000490062.1",
"transcript_support_level": 5,
"aa_start": 410,
"aa_end": null,
"aa_length": 877,
"cds_start": 1228,
"cds_end": null,
"cds_length": 2634,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "NM_001387025.1",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000635736.2"
},
{
"aa_ref": "I",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 9,
"exon_rank_end": null,
"exon_count": 20,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "GRAMD1B",
"gene_hgnc_id": 29214,
"hgvs_c": "c.799A>G",
"hgvs_p": "p.Ile267Val",
"transcript": "ENST00000529750.5",
"protein_id": "ENSP00000436500.1",
"transcript_support_level": 1,
"aa_start": 267,
"aa_end": null,
"aa_length": 738,
"cds_start": 799,
"cds_end": null,
"cds_length": 2217,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000529750.5"
},
{
"aa_ref": "I",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 9,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "GRAMD1B",
"gene_hgnc_id": 29214,
"hgvs_c": "c.787A>G",
"hgvs_p": "p.Ile263Val",
"transcript": "ENST00000534764.1",
"protein_id": "ENSP00000434214.1",
"transcript_support_level": 1,
"aa_start": 263,
"aa_end": null,
"aa_length": 440,
"cds_start": 787,
"cds_end": null,
"cds_length": 1324,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000534764.1"
},
{
"aa_ref": "I",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 10,
"exon_rank_end": null,
"exon_count": 20,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "GRAMD1B",
"gene_hgnc_id": 29214,
"hgvs_c": "c.1228A>G",
"hgvs_p": "p.Ile410Val",
"transcript": "NM_001387024.1",
"protein_id": "NP_001373953.1",
"transcript_support_level": null,
"aa_start": 410,
"aa_end": null,
"aa_length": 901,
"cds_start": 1228,
"cds_end": null,
"cds_length": 2706,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001387024.1"
},
{
"aa_ref": "I",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 10,
"exon_rank_end": null,
"exon_count": 20,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "GRAMD1B",
"gene_hgnc_id": 29214,
"hgvs_c": "c.1228A>G",
"hgvs_p": "p.Ile410Val",
"transcript": "ENST00000943465.1",
"protein_id": "ENSP00000613524.1",
"transcript_support_level": null,
"aa_start": 410,
"aa_end": null,
"aa_length": 887,
"cds_start": 1228,
"cds_end": null,
"cds_length": 2664,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000943465.1"
},
{
"aa_ref": "I",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 11,
"exon_rank_end": null,
"exon_count": 21,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "GRAMD1B",
"gene_hgnc_id": 29214,
"hgvs_c": "c.1252A>G",
"hgvs_p": "p.Ile418Val",
"transcript": "ENST00000943464.1",
"protein_id": "ENSP00000613523.1",
"transcript_support_level": null,
"aa_start": 418,
"aa_end": null,
"aa_length": 885,
"cds_start": 1252,
"cds_end": null,
"cds_length": 2658,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000943464.1"
},
{
"aa_ref": "I",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 11,
"exon_rank_end": null,
"exon_count": 21,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "GRAMD1B",
"gene_hgnc_id": 29214,
"hgvs_c": "c.1228A>G",
"hgvs_p": "p.Ile410Val",
"transcript": "ENST00000943461.1",
"protein_id": "ENSP00000613520.1",
"transcript_support_level": null,
"aa_start": 410,
"aa_end": null,
"aa_length": 877,
"cds_start": 1228,
"cds_end": null,
"cds_length": 2634,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000943461.1"
},
{
"aa_ref": "I",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 12,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "GRAMD1B",
"gene_hgnc_id": 29214,
"hgvs_c": "c.1228A>G",
"hgvs_p": "p.Ile410Val",
"transcript": "ENST00000943462.1",
"protein_id": "ENSP00000613521.1",
"transcript_support_level": null,
"aa_start": 410,
"aa_end": null,
"aa_length": 877,
"cds_start": 1228,
"cds_end": null,
"cds_length": 2634,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000943462.1"
},
{
"aa_ref": "I",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 12,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "GRAMD1B",
"gene_hgnc_id": 29214,
"hgvs_c": "c.1228A>G",
"hgvs_p": "p.Ile410Val",
"transcript": "ENST00000943463.1",
"protein_id": "ENSP00000613522.1",
"transcript_support_level": null,
"aa_start": 410,
"aa_end": null,
"aa_length": 877,
"cds_start": 1228,
"cds_end": null,
"cds_length": 2634,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000943463.1"
},
{
"aa_ref": "I",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 10,
"exon_rank_end": null,
"exon_count": 20,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "GRAMD1B",
"gene_hgnc_id": 29214,
"hgvs_c": "c.1225A>G",
"hgvs_p": "p.Ile409Val",
"transcript": "NM_001387026.1",
"protein_id": "NP_001373955.1",
"transcript_support_level": null,
"aa_start": 409,
"aa_end": null,
"aa_length": 876,
"cds_start": 1225,
"cds_end": null,
"cds_length": 2631,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001387026.1"
},
{
"aa_ref": "I",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 11,
"exon_rank_end": null,
"exon_count": 21,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "GRAMD1B",
"gene_hgnc_id": 29214,
"hgvs_c": "c.1096A>G",
"hgvs_p": "p.Ile366Val",
"transcript": "NM_001367421.2",
"protein_id": "NP_001354350.1",
"transcript_support_level": null,
"aa_start": 366,
"aa_end": null,
"aa_length": 833,
"cds_start": 1096,
"cds_end": null,
"cds_length": 2502,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001367421.2"
},
{
"aa_ref": "I",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 10,
"exon_rank_end": null,
"exon_count": 21,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "GRAMD1B",
"gene_hgnc_id": 29214,
"hgvs_c": "c.880A>G",
"hgvs_p": "p.Ile294Val",
"transcript": "NM_001367420.2",
"protein_id": "NP_001354349.1",
"transcript_support_level": null,
"aa_start": 294,
"aa_end": null,
"aa_length": 789,
"cds_start": 880,
"cds_end": null,
"cds_length": 2370,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001367420.2"
},
{
"aa_ref": "I",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 9,
"exon_rank_end": null,
"exon_count": 20,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "GRAMD1B",
"gene_hgnc_id": 29214,
"hgvs_c": "c.886A>G",
"hgvs_p": "p.Ile296Val",
"transcript": "ENST00000638086.1",
"protein_id": "ENSP00000490920.1",
"transcript_support_level": 5,
"aa_start": 296,
"aa_end": null,
"aa_length": 767,
"cds_start": 886,
"cds_end": null,
"cds_length": 2304,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000638086.1"
},
{
"aa_ref": "I",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 10,
"exon_rank_end": null,
"exon_count": 21,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "GRAMD1B",
"gene_hgnc_id": 29214,
"hgvs_c": "c.880A>G",
"hgvs_p": "p.Ile294Val",
"transcript": "NM_001367419.2",
"protein_id": "NP_001354348.1",
"transcript_support_level": null,
"aa_start": 294,
"aa_end": null,
"aa_length": 765,
"cds_start": 880,
"cds_end": null,
"cds_length": 2298,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001367419.2"
},
{
"aa_ref": "I",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 9,
"exon_rank_end": null,
"exon_count": 20,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "GRAMD1B",
"gene_hgnc_id": 29214,
"hgvs_c": "c.799A>G",
"hgvs_p": "p.Ile267Val",
"transcript": "NM_001387028.1",
"protein_id": "NP_001373957.1",
"transcript_support_level": null,
"aa_start": 267,
"aa_end": null,
"aa_length": 762,
"cds_start": 799,
"cds_end": null,
"cds_length": 2289,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001387028.1"
},
{
"aa_ref": "I",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 10,
"exon_rank_end": null,
"exon_count": 20,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "GRAMD1B",
"gene_hgnc_id": 29214,
"hgvs_c": "c.880A>G",
"hgvs_p": "p.Ile294Val",
"transcript": "NM_001367418.2",
"protein_id": "NP_001354347.1",
"transcript_support_level": null,
"aa_start": 294,
"aa_end": null,
"aa_length": 761,
"cds_start": 880,
"cds_end": null,
"cds_length": 2286,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001367418.2"
},
{
"aa_ref": "I",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 10,
"exon_rank_end": null,
"exon_count": 21,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "GRAMD1B",
"gene_hgnc_id": 29214,
"hgvs_c": "c.820A>G",
"hgvs_p": "p.Ile274Val",
"transcript": "NM_001286563.3",
"protein_id": "NP_001273492.1",
"transcript_support_level": null,
"aa_start": 274,
"aa_end": null,
"aa_length": 745,
"cds_start": 820,
"cds_end": null,
"cds_length": 2238,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001286563.3"
},
{
"aa_ref": "I",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 10,
"exon_rank_end": null,
"exon_count": 21,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "GRAMD1B",
"gene_hgnc_id": 29214,
"hgvs_c": "c.820A>G",
"hgvs_p": "p.Ile274Val",
"transcript": "ENST00000456860.6",
"protein_id": "ENSP00000402457.2",
"transcript_support_level": 2,
"aa_start": 274,
"aa_end": null,
"aa_length": 745,
"cds_start": 820,
"cds_end": null,
"cds_length": 2238,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000456860.6"
},
{
"aa_ref": "I",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 9,
"exon_rank_end": null,
"exon_count": 20,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "GRAMD1B",
"gene_hgnc_id": 29214,
"hgvs_c": "c.799A>G",
"hgvs_p": "p.Ile267Val",
"transcript": "NM_020716.4",
"protein_id": "NP_065767.1",
"transcript_support_level": null,
"aa_start": 267,
"aa_end": null,
"aa_length": 738,
"cds_start": 799,
"cds_end": null,
"cds_length": 2217,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_020716.4"
},
{
"aa_ref": "I",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 9,
"exon_rank_end": null,
"exon_count": 19,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "GRAMD1B",
"gene_hgnc_id": 29214,
"hgvs_c": "c.799A>G",
"hgvs_p": "p.Ile267Val",
"transcript": "NM_001387029.1",
"protein_id": "NP_001373958.1",
"transcript_support_level": null,
"aa_start": 267,
"aa_end": null,
"aa_length": 734,
"cds_start": 799,
"cds_end": null,
"cds_length": 2205,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001387029.1"
},
{
"aa_ref": "I",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 10,
"exon_rank_end": null,
"exon_count": 19,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "GRAMD1B",
"gene_hgnc_id": 29214,
"hgvs_c": "c.679A>G",
"hgvs_p": "p.Ile227Val",
"transcript": "NM_001387030.1",
"protein_id": "NP_001373959.1",
"transcript_support_level": null,
"aa_start": 227,
"aa_end": null,
"aa_length": 713,
"cds_start": 679,
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"clinvar_classification": "Uncertain significance",
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"phenotype_combined": "not specified",
"pathogenicity_classification_combined": "Uncertain significance",
"custom_annotations": null
}
],
"message": null
}