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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 11-16791013-T-G (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=11&pos=16791013&ref=T&alt=G&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "11",
"pos": 16791013,
"ref": "T",
"alt": "G",
"effect": "splice_region_variant,synonymous_variant",
"transcript": "NM_001410960.1",
"consequences": [
{
"aa_ref": "R",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"splice_region_variant",
"synonymous_variant"
],
"exon_rank": 20,
"exon_rank_end": null,
"exon_count": 27,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PLEKHA7",
"gene_hgnc_id": 27049,
"hgvs_c": "c.2932A>C",
"hgvs_p": "p.Arg978Arg",
"transcript": "NM_001329630.2",
"protein_id": "NP_001316559.1",
"transcript_support_level": null,
"aa_start": 978,
"aa_end": null,
"aa_length": 1271,
"cds_start": 2932,
"cds_end": null,
"cds_length": 3816,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "ENST00000531066.6",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001329630.2"
},
{
"aa_ref": "R",
"aa_alt": "R",
"canonical": true,
"protein_coding": true,
"strand": false,
"consequences": [
"splice_region_variant",
"synonymous_variant"
],
"exon_rank": 20,
"exon_rank_end": null,
"exon_count": 27,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PLEKHA7",
"gene_hgnc_id": 27049,
"hgvs_c": "c.2932A>C",
"hgvs_p": "p.Arg978Arg",
"transcript": "ENST00000531066.6",
"protein_id": "ENSP00000435389.1",
"transcript_support_level": 5,
"aa_start": 978,
"aa_end": null,
"aa_length": 1271,
"cds_start": 2932,
"cds_end": null,
"cds_length": 3816,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "NM_001329630.2",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000531066.6"
},
{
"aa_ref": "R",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"splice_region_variant",
"synonymous_variant"
],
"exon_rank": 20,
"exon_rank_end": null,
"exon_count": 23,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PLEKHA7",
"gene_hgnc_id": 27049,
"hgvs_c": "c.2932A>C",
"hgvs_p": "p.Arg978Arg",
"transcript": "ENST00000355661.7",
"protein_id": "ENSP00000347883.2",
"transcript_support_level": 1,
"aa_start": 978,
"aa_end": null,
"aa_length": 1121,
"cds_start": 2932,
"cds_end": null,
"cds_length": 3366,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000355661.7"
},
{
"aa_ref": "R",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"splice_region_variant",
"synonymous_variant"
],
"exon_rank": 11,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PLEKHA7",
"gene_hgnc_id": 27049,
"hgvs_c": "c.1825A>C",
"hgvs_p": "p.Arg609Arg",
"transcript": "ENST00000530489.5",
"protein_id": "ENSP00000433467.1",
"transcript_support_level": 1,
"aa_start": 609,
"aa_end": null,
"aa_length": 752,
"cds_start": 1825,
"cds_end": null,
"cds_length": 2259,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000530489.5"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"splice_region_variant",
"non_coding_transcript_exon_variant"
],
"exon_rank": 2,
"exon_rank_end": null,
"exon_count": 5,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PLEKHA7",
"gene_hgnc_id": 27049,
"hgvs_c": "n.331A>C",
"hgvs_p": null,
"transcript": "ENST00000332954.8",
"protein_id": null,
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": null,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "pseudogene",
"feature": "ENST00000332954.8"
},
{
"aa_ref": "R",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"splice_region_variant",
"synonymous_variant"
],
"exon_rank": 20,
"exon_rank_end": null,
"exon_count": 27,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PLEKHA7",
"gene_hgnc_id": 27049,
"hgvs_c": "c.2935A>C",
"hgvs_p": "p.Arg979Arg",
"transcript": "NM_001410960.1",
"protein_id": "NP_001397889.1",
"transcript_support_level": null,
"aa_start": 979,
"aa_end": null,
"aa_length": 1272,
"cds_start": 2935,
"cds_end": null,
"cds_length": 3819,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001410960.1"
},
{
"aa_ref": "R",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"splice_region_variant",
"synonymous_variant"
],
"exon_rank": 20,
"exon_rank_end": null,
"exon_count": 27,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PLEKHA7",
"gene_hgnc_id": 27049,
"hgvs_c": "c.2935A>C",
"hgvs_p": "p.Arg979Arg",
"transcript": "ENST00000698836.1",
"protein_id": "ENSP00000513972.1",
"transcript_support_level": null,
"aa_start": 979,
"aa_end": null,
"aa_length": 1272,
"cds_start": 2935,
"cds_end": null,
"cds_length": 3819,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000698836.1"
},
{
"aa_ref": "R",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"splice_region_variant",
"synonymous_variant"
],
"exon_rank": 20,
"exon_rank_end": null,
"exon_count": 26,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PLEKHA7",
"gene_hgnc_id": 27049,
"hgvs_c": "c.2935A>C",
"hgvs_p": "p.Arg979Arg",
"transcript": "ENST00000917925.1",
"protein_id": "ENSP00000587984.1",
"transcript_support_level": null,
"aa_start": 979,
"aa_end": null,
"aa_length": 1219,
"cds_start": 2935,
"cds_end": null,
"cds_length": 3660,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000917925.1"
},
{
"aa_ref": "R",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"splice_region_variant",
"synonymous_variant"
],
"exon_rank": 16,
"exon_rank_end": null,
"exon_count": 23,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PLEKHA7",
"gene_hgnc_id": 27049,
"hgvs_c": "c.2563A>C",
"hgvs_p": "p.Arg855Arg",
"transcript": "ENST00000637162.1",
"protein_id": "ENSP00000489780.1",
"transcript_support_level": 5,
"aa_start": 855,
"aa_end": null,
"aa_length": 1191,
"cds_start": 2563,
"cds_end": null,
"cds_length": 3576,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000637162.1"
},
{
"aa_ref": "R",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"splice_region_variant",
"synonymous_variant"
],
"exon_rank": 20,
"exon_rank_end": null,
"exon_count": 23,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PLEKHA7",
"gene_hgnc_id": 27049,
"hgvs_c": "c.2935A>C",
"hgvs_p": "p.Arg979Arg",
"transcript": "NM_001329631.2",
"protein_id": "NP_001316560.1",
"transcript_support_level": null,
"aa_start": 979,
"aa_end": null,
"aa_length": 1122,
"cds_start": 2935,
"cds_end": null,
"cds_length": 3369,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001329631.2"
},
{
"aa_ref": "R",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"splice_region_variant",
"synonymous_variant"
],
"exon_rank": 20,
"exon_rank_end": null,
"exon_count": 23,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PLEKHA7",
"gene_hgnc_id": 27049,
"hgvs_c": "c.2932A>C",
"hgvs_p": "p.Arg978Arg",
"transcript": "NM_175058.5",
"protein_id": "NP_778228.3",
"transcript_support_level": null,
"aa_start": 978,
"aa_end": null,
"aa_length": 1121,
"cds_start": 2932,
"cds_end": null,
"cds_length": 3366,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_175058.5"
},
{
"aa_ref": "R",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"splice_region_variant",
"synonymous_variant"
],
"exon_rank": 18,
"exon_rank_end": null,
"exon_count": 21,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PLEKHA7",
"gene_hgnc_id": 27049,
"hgvs_c": "c.2803A>C",
"hgvs_p": "p.Arg935Arg",
"transcript": "ENST00000696749.1",
"protein_id": "ENSP00000512848.1",
"transcript_support_level": null,
"aa_start": 935,
"aa_end": null,
"aa_length": 1078,
"cds_start": 2803,
"cds_end": null,
"cds_length": 3237,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000696749.1"
},
{
"aa_ref": "R",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"splice_region_variant",
"synonymous_variant"
],
"exon_rank": 10,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PLEKHA7",
"gene_hgnc_id": 27049,
"hgvs_c": "c.1150A>C",
"hgvs_p": "p.Arg384Arg",
"transcript": "ENST00000636113.1",
"protein_id": "ENSP00000490177.1",
"transcript_support_level": 5,
"aa_start": 384,
"aa_end": null,
"aa_length": 527,
"cds_start": 1150,
"cds_end": null,
"cds_length": 1584,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000636113.1"
},
{
"aa_ref": "R",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"splice_region_variant",
"synonymous_variant"
],
"exon_rank": 4,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PLEKHA7",
"gene_hgnc_id": 27049,
"hgvs_c": "c.595A>C",
"hgvs_p": "p.Arg199Arg",
"transcript": "ENST00000636090.1",
"protein_id": "ENSP00000490167.1",
"transcript_support_level": 5,
"aa_start": 199,
"aa_end": null,
"aa_length": 518,
"cds_start": 595,
"cds_end": null,
"cds_length": 1557,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000636090.1"
},
{
"aa_ref": "R",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"splice_region_variant",
"synonymous_variant"
],
"exon_rank": 22,
"exon_rank_end": null,
"exon_count": 29,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PLEKHA7",
"gene_hgnc_id": 27049,
"hgvs_c": "c.3136A>C",
"hgvs_p": "p.Arg1046Arg",
"transcript": "XM_047426426.1",
"protein_id": "XP_047282382.1",
"transcript_support_level": null,
"aa_start": 1046,
"aa_end": null,
"aa_length": 1365,
"cds_start": 3136,
"cds_end": null,
"cds_length": 4098,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "XM_047426426.1"
},
{
"aa_ref": "R",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"splice_region_variant",
"synonymous_variant"
],
"exon_rank": 22,
"exon_rank_end": null,
"exon_count": 29,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PLEKHA7",
"gene_hgnc_id": 27049,
"hgvs_c": "c.3133A>C",
"hgvs_p": "p.Arg1045Arg",
"transcript": "XM_024448357.2",
"protein_id": "XP_024304125.1",
"transcript_support_level": null,
"aa_start": 1045,
"aa_end": null,
"aa_length": 1364,
"cds_start": 3133,
"cds_end": null,
"cds_length": 4095,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "XM_024448357.2"
},
{
"aa_ref": "R",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"splice_region_variant",
"synonymous_variant"
],
"exon_rank": 22,
"exon_rank_end": null,
"exon_count": 29,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PLEKHA7",
"gene_hgnc_id": 27049,
"hgvs_c": "c.3136A>C",
"hgvs_p": "p.Arg1046Arg",
"transcript": "XM_024448358.2",
"protein_id": "XP_024304126.1",
"transcript_support_level": null,
"aa_start": 1046,
"aa_end": null,
"aa_length": 1339,
"cds_start": 3136,
"cds_end": null,
"cds_length": 4020,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "XM_024448358.2"
},
{
"aa_ref": "R",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"splice_region_variant",
"synonymous_variant"
],
"exon_rank": 21,
"exon_rank_end": null,
"exon_count": 28,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PLEKHA7",
"gene_hgnc_id": 27049,
"hgvs_c": "c.3055A>C",
"hgvs_p": "p.Arg1019Arg",
"transcript": "XM_047426427.1",
"protein_id": "XP_047282383.1",
"transcript_support_level": null,
"aa_start": 1019,
"aa_end": null,
"aa_length": 1338,
"cds_start": 3055,
"cds_end": null,
"cds_length": 4017,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "XM_047426427.1"
},
{
"aa_ref": "R",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"splice_region_variant",
"synonymous_variant"
],
"exon_rank": 21,
"exon_rank_end": null,
"exon_count": 28,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PLEKHA7",
"gene_hgnc_id": 27049,
"hgvs_c": "c.3016A>C",
"hgvs_p": "p.Arg1006Arg",
"transcript": "XM_047426428.1",
"protein_id": "XP_047282384.1",
"transcript_support_level": null,
"aa_start": 1006,
"aa_end": null,
"aa_length": 1325,
"cds_start": 3016,
"cds_end": null,
"cds_length": 3978,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "XM_047426428.1"
},
{
"aa_ref": "R",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"splice_region_variant",
"synonymous_variant"
],
"exon_rank": 20,
"exon_rank_end": null,
"exon_count": 27,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PLEKHA7",
"gene_hgnc_id": 27049,
"hgvs_c": "c.3007A>C",
"hgvs_p": "p.Arg1003Arg",
"transcript": "XM_047426433.1",
"protein_id": "XP_047282389.1",
"transcript_support_level": null,
"aa_start": 1003,
"aa_end": null,
"aa_length": 1322,
"cds_start": 3007,
"cds_end": null,
"cds_length": 3969,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "XM_047426433.1"
},
{
"aa_ref": "R",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"splice_region_variant",
"synonymous_variant"
],
"exon_rank": 20,
"exon_rank_end": null,
"exon_count": 27,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PLEKHA7",
"gene_hgnc_id": 27049,
"hgvs_c": "c.2998A>C",
"hgvs_p": "p.Arg1000Arg",
"transcript": "XM_024448361.2",
"protein_id": "XP_024304129.1",
"transcript_support_level": null,
"aa_start": 1000,
"aa_end": null,
"aa_length": 1319,
"cds_start": 2998,
"cds_end": null,
"cds_length": 3960,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "XM_024448361.2"
},
{
"aa_ref": "R",
"aa_alt": "R",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"splice_region_variant",
"synonymous_variant"
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}
],
"message": null
}