← Back to variant description

GeneBe API Showcase

This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.

API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.

Documentation & Advanced Usage

Complete API documentation:docs.genebe.net/docs/api/overview/

Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/

Python client for pandas:pypi.org/project/genebe/

Java CLI for VCF files:github.com/pstawinski/genebe-cli

All tools documented at:docs.genebe.net

API Request Examples for Variant: 11-34984675-A-C (hg38)

Bash / cURL Example

bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=11&pos=34984675&ref=A&alt=C&genome=hg38&allGenes=true"

API Response

json
{
  "variants": [
    {
      "chr": "11",
      "pos": 34984675,
      "ref": "A",
      "alt": "C",
      "effect": "missense_variant",
      "transcript": "NM_003477.3",
      "consequences": [
        {
          "aa_ref": "I",
          "aa_alt": "L",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 9,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PDHX",
          "gene_hgnc_id": 21350,
          "hgvs_c": "c.1129A>C",
          "hgvs_p": "p.Ile377Leu",
          "transcript": "NM_003477.3",
          "protein_id": "NP_003468.2",
          "transcript_support_level": null,
          "aa_start": 377,
          "aa_end": null,
          "aa_length": 501,
          "cds_start": 1129,
          "cds_end": null,
          "cds_length": 1506,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": "ENST00000227868.9",
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_003477.3"
        },
        {
          "aa_ref": "I",
          "aa_alt": "L",
          "canonical": true,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 9,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PDHX",
          "gene_hgnc_id": 21350,
          "hgvs_c": "c.1129A>C",
          "hgvs_p": "p.Ile377Leu",
          "transcript": "ENST00000227868.9",
          "protein_id": "ENSP00000227868.4",
          "transcript_support_level": 1,
          "aa_start": 377,
          "aa_end": null,
          "aa_length": 501,
          "cds_start": 1129,
          "cds_end": null,
          "cds_length": 1506,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": "NM_003477.3",
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000227868.9"
        },
        {
          "aa_ref": "I",
          "aa_alt": "L",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 9,
          "exon_rank_end": null,
          "exon_count": 12,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PDHX",
          "gene_hgnc_id": 21350,
          "hgvs_c": "c.1129A>C",
          "hgvs_p": "p.Ile377Leu",
          "transcript": "ENST00000885501.1",
          "protein_id": "ENSP00000555560.1",
          "transcript_support_level": null,
          "aa_start": 377,
          "aa_end": null,
          "aa_length": 548,
          "cds_start": 1129,
          "cds_end": null,
          "cds_length": 1647,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000885501.1"
        },
        {
          "aa_ref": "I",
          "aa_alt": "L",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 9,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PDHX",
          "gene_hgnc_id": 21350,
          "hgvs_c": "c.1129A>C",
          "hgvs_p": "p.Ile377Leu",
          "transcript": "ENST00000952507.1",
          "protein_id": "ENSP00000622566.1",
          "transcript_support_level": null,
          "aa_start": 377,
          "aa_end": null,
          "aa_length": 508,
          "cds_start": 1129,
          "cds_end": null,
          "cds_length": 1527,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000952507.1"
        },
        {
          "aa_ref": "I",
          "aa_alt": "L",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 9,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PDHX",
          "gene_hgnc_id": 21350,
          "hgvs_c": "c.1147A>C",
          "hgvs_p": "p.Ile383Leu",
          "transcript": "ENST00000952504.1",
          "protein_id": "ENSP00000622563.1",
          "transcript_support_level": null,
          "aa_start": 383,
          "aa_end": null,
          "aa_length": 507,
          "cds_start": 1147,
          "cds_end": null,
          "cds_length": 1524,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000952504.1"
        },
        {
          "aa_ref": "I",
          "aa_alt": "L",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 9,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PDHX",
          "gene_hgnc_id": 21350,
          "hgvs_c": "c.1132A>C",
          "hgvs_p": "p.Ile378Leu",
          "transcript": "ENST00000885499.1",
          "protein_id": "ENSP00000555558.1",
          "transcript_support_level": null,
          "aa_start": 378,
          "aa_end": null,
          "aa_length": 502,
          "cds_start": 1132,
          "cds_end": null,
          "cds_length": 1509,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000885499.1"
        },
        {
          "aa_ref": "I",
          "aa_alt": "L",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 9,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PDHX",
          "gene_hgnc_id": 21350,
          "hgvs_c": "c.1126A>C",
          "hgvs_p": "p.Ile376Leu",
          "transcript": "ENST00000885497.1",
          "protein_id": "ENSP00000555556.1",
          "transcript_support_level": null,
          "aa_start": 376,
          "aa_end": null,
          "aa_length": 500,
          "cds_start": 1126,
          "cds_end": null,
          "cds_length": 1503,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000885497.1"
        },
        {
          "aa_ref": "I",
          "aa_alt": "L",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 9,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PDHX",
          "gene_hgnc_id": 21350,
          "hgvs_c": "c.1126A>C",
          "hgvs_p": "p.Ile376Leu",
          "transcript": "ENST00000885498.1",
          "protein_id": "ENSP00000555557.1",
          "transcript_support_level": null,
          "aa_start": 376,
          "aa_end": null,
          "aa_length": 500,
          "cds_start": 1126,
          "cds_end": null,
          "cds_length": 1503,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000885498.1"
        },
        {
          "aa_ref": "I",
          "aa_alt": "L",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 9,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PDHX",
          "gene_hgnc_id": 21350,
          "hgvs_c": "c.1123A>C",
          "hgvs_p": "p.Ile375Leu",
          "transcript": "ENST00000952503.1",
          "protein_id": "ENSP00000622562.1",
          "transcript_support_level": null,
          "aa_start": 375,
          "aa_end": null,
          "aa_length": 499,
          "cds_start": 1123,
          "cds_end": null,
          "cds_length": 1500,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000952503.1"
        },
        {
          "aa_ref": "I",
          "aa_alt": "L",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 8,
          "exon_rank_end": null,
          "exon_count": 10,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PDHX",
          "gene_hgnc_id": 21350,
          "hgvs_c": "c.1030A>C",
          "hgvs_p": "p.Ile344Leu",
          "transcript": "ENST00000952501.1",
          "protein_id": "ENSP00000622560.1",
          "transcript_support_level": null,
          "aa_start": 344,
          "aa_end": null,
          "aa_length": 468,
          "cds_start": 1030,
          "cds_end": null,
          "cds_length": 1407,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000952501.1"
        },
        {
          "aa_ref": "I",
          "aa_alt": "L",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 8,
          "exon_rank_end": null,
          "exon_count": 10,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PDHX",
          "gene_hgnc_id": 21350,
          "hgvs_c": "c.1000A>C",
          "hgvs_p": "p.Ile334Leu",
          "transcript": "ENST00000952505.1",
          "protein_id": "ENSP00000622564.1",
          "transcript_support_level": null,
          "aa_start": 334,
          "aa_end": null,
          "aa_length": 458,
          "cds_start": 1000,
          "cds_end": null,
          "cds_length": 1377,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000952505.1"
        },
        {
          "aa_ref": "I",
          "aa_alt": "L",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 9,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PDHX",
          "gene_hgnc_id": 21350,
          "hgvs_c": "c.949A>C",
          "hgvs_p": "p.Ile317Leu",
          "transcript": "NM_001135024.2",
          "protein_id": "NP_001128496.2",
          "transcript_support_level": null,
          "aa_start": 317,
          "aa_end": null,
          "aa_length": 441,
          "cds_start": 949,
          "cds_end": null,
          "cds_length": 1326,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001135024.2"
        },
        {
          "aa_ref": "I",
          "aa_alt": "L",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 9,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PDHX",
          "gene_hgnc_id": 21350,
          "hgvs_c": "c.949A>C",
          "hgvs_p": "p.Ile317Leu",
          "transcript": "ENST00000448838.8",
          "protein_id": "ENSP00000389404.3",
          "transcript_support_level": 5,
          "aa_start": 317,
          "aa_end": null,
          "aa_length": 441,
          "cds_start": 949,
          "cds_end": null,
          "cds_length": 1326,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000448838.8"
        },
        {
          "aa_ref": "I",
          "aa_alt": "L",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 6,
          "exon_rank_end": null,
          "exon_count": 8,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PDHX",
          "gene_hgnc_id": 21350,
          "hgvs_c": "c.655A>C",
          "hgvs_p": "p.Ile219Leu",
          "transcript": "ENST00000885500.1",
          "protein_id": "ENSP00000555559.1",
          "transcript_support_level": null,
          "aa_start": 219,
          "aa_end": null,
          "aa_length": 343,
          "cds_start": 655,
          "cds_end": null,
          "cds_length": 1032,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000885500.1"
        },
        {
          "aa_ref": "I",
          "aa_alt": "L",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 4,
          "exon_rank_end": null,
          "exon_count": 6,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PDHX",
          "gene_hgnc_id": 21350,
          "hgvs_c": "c.448A>C",
          "hgvs_p": "p.Ile150Leu",
          "transcript": "NM_001166158.2",
          "protein_id": "NP_001159630.1",
          "transcript_support_level": null,
          "aa_start": 150,
          "aa_end": null,
          "aa_length": 274,
          "cds_start": 448,
          "cds_end": null,
          "cds_length": 825,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001166158.2"
        },
        {
          "aa_ref": "I",
          "aa_alt": "L",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 4,
          "exon_rank_end": null,
          "exon_count": 6,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PDHX",
          "gene_hgnc_id": 21350,
          "hgvs_c": "c.448A>C",
          "hgvs_p": "p.Ile150Leu",
          "transcript": "ENST00000430469.6",
          "protein_id": "ENSP00000415695.2",
          "transcript_support_level": 2,
          "aa_start": 150,
          "aa_end": null,
          "aa_length": 274,
          "cds_start": 448,
          "cds_end": null,
          "cds_length": 825,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000430469.6"
        },
        {
          "aa_ref": "I",
          "aa_alt": "L",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 4,
          "exon_rank_end": null,
          "exon_count": 6,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PDHX",
          "gene_hgnc_id": 21350,
          "hgvs_c": "c.442A>C",
          "hgvs_p": "p.Ile148Leu",
          "transcript": "ENST00000952502.1",
          "protein_id": "ENSP00000622561.1",
          "transcript_support_level": null,
          "aa_start": 148,
          "aa_end": null,
          "aa_length": 272,
          "cds_start": 442,
          "cds_end": null,
          "cds_length": 819,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000952502.1"
        },
        {
          "aa_ref": "I",
          "aa_alt": "L",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 4,
          "exon_rank_end": null,
          "exon_count": 6,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PDHX",
          "gene_hgnc_id": 21350,
          "hgvs_c": "c.406A>C",
          "hgvs_p": "p.Ile136Leu",
          "transcript": "ENST00000885503.1",
          "protein_id": "ENSP00000555562.1",
          "transcript_support_level": null,
          "aa_start": 136,
          "aa_end": null,
          "aa_length": 260,
          "cds_start": 406,
          "cds_end": null,
          "cds_length": 783,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000885503.1"
        },
        {
          "aa_ref": "I",
          "aa_alt": "L",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 3,
          "exon_rank_end": null,
          "exon_count": 5,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PDHX",
          "gene_hgnc_id": 21350,
          "hgvs_c": "c.190A>C",
          "hgvs_p": "p.Ile64Leu",
          "transcript": "ENST00000526309.1",
          "protein_id": "ENSP00000433204.1",
          "transcript_support_level": 3,
          "aa_start": 64,
          "aa_end": null,
          "aa_length": 188,
          "cds_start": 190,
          "cds_end": null,
          "cds_length": 567,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000526309.1"
        },
        {
          "aa_ref": "I",
          "aa_alt": "L",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 9,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PDHX",
          "gene_hgnc_id": 21350,
          "hgvs_c": "c.949A>C",
          "hgvs_p": "p.Ile317Leu",
          "transcript": "XM_011520390.2",
          "protein_id": "XP_011518692.1",
          "transcript_support_level": null,
          "aa_start": 317,
          "aa_end": null,
          "aa_length": 441,
          "cds_start": 949,
          "cds_end": null,
          "cds_length": 1326,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "XM_011520390.2"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 10,
          "intron_rank": 8,
          "intron_rank_end": null,
          "gene_symbol": "PDHX",
          "gene_hgnc_id": 21350,
          "hgvs_c": "c.1023+6493A>C",
          "hgvs_p": null,
          "transcript": "ENST00000952506.1",
          "protein_id": "ENSP00000622565.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 448,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 1347,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000952506.1"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 5,
          "intron_rank": 3,
          "intron_rank_end": null,
          "gene_symbol": "PDHX",
          "gene_hgnc_id": 21350,
          "hgvs_c": "c.343-7640A>C",
          "hgvs_p": null,
          "transcript": "ENST00000885502.1",
          "protein_id": "ENSP00000555561.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 221,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 666,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000885502.1"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": true,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 1,
          "exon_rank_end": null,
          "exon_count": 3,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PDHX",
          "gene_hgnc_id": 21350,
          "hgvs_c": "n.43A>C",
          "hgvs_p": null,
          "transcript": "ENST00000477173.3",
          "protein_id": null,
          "transcript_support_level": 3,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": null,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "pseudogene",
          "feature": "ENST00000477173.3"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": true,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 2,
          "exon_rank_end": null,
          "exon_count": 2,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PDHX",
          "gene_hgnc_id": 21350,
          "hgvs_c": "n.354A>C",
          "hgvs_p": null,
          "transcript": "ENST00000532159.1",
          "protein_id": null,
          "transcript_support_level": 3,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": null,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "retained_intron",
          "feature": "ENST00000532159.1"
        }
      ],
      "gene_symbol": "PDHX",
      "gene_hgnc_id": 21350,
      "dbsnp": "rs75430333",
      "frequency_reference_population": 6.841059e-7,
      "hom_count_reference_population": 0,
      "allele_count_reference_population": 1,
      "gnomad_exomes_af": 6.84106e-7,
      "gnomad_genomes_af": null,
      "gnomad_exomes_ac": 1,
      "gnomad_genomes_ac": null,
      "gnomad_exomes_homalt": 0,
      "gnomad_genomes_homalt": null,
      "gnomad_mito_homoplasmic": null,
      "gnomad_mito_heteroplasmic": null,
      "computational_score_selected": 0.7987757921218872,
      "computational_prediction_selected": "Pathogenic",
      "computational_source_selected": "MetaRNN",
      "splice_score_selected": 0,
      "splice_prediction_selected": "Benign",
      "splice_source_selected": "max_spliceai",
      "revel_score": 0.324,
      "revel_prediction": "Uncertain_significance",
      "alphamissense_score": 0.268,
      "alphamissense_prediction": null,
      "bayesdelnoaf_score": -0.3,
      "bayesdelnoaf_prediction": "Benign",
      "phylop100way_score": 2.617,
      "phylop100way_prediction": "Benign",
      "spliceai_max_score": 0,
      "spliceai_max_prediction": "Benign",
      "dbscsnv_ada_score": null,
      "dbscsnv_ada_prediction": null,
      "apogee2_score": null,
      "apogee2_prediction": null,
      "mitotip_score": null,
      "mitotip_prediction": null,
      "acmg_score": 3,
      "acmg_classification": "Uncertain_significance",
      "acmg_criteria": "PM2,PP3",
      "acmg_by_gene": [
        {
          "score": 3,
          "benign_score": 0,
          "pathogenic_score": 3,
          "criteria": [
            "PM2",
            "PP3"
          ],
          "verdict": "Uncertain_significance",
          "transcript": "NM_003477.3",
          "gene_symbol": "PDHX",
          "hgnc_id": 21350,
          "effects": [
            "missense_variant"
          ],
          "inheritance_mode": "AR",
          "hgvs_c": "c.1129A>C",
          "hgvs_p": "p.Ile377Leu"
        }
      ],
      "clinvar_disease": "",
      "clinvar_classification": "",
      "clinvar_review_status": "",
      "clinvar_submissions_summary": "",
      "phenotype_combined": null,
      "pathogenicity_classification_combined": null,
      "custom_annotations": null
    }
  ],
  "message": null
}
For research and educational, non-commercial use only. Not for clinical or diagnostic use. GeneBe does not provide medical advice. Data use for AI modeling is prohibited: if used, the cost is $0.001 per byte of downloaded uncompressed data.