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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 11-6431337-A-G (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=11&pos=6431337&ref=A&alt=G&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "11",
"pos": 6431337,
"ref": "A",
"alt": "G",
"effect": "synonymous_variant",
"transcript": "NM_000613.3",
"consequences": [
{
"aa_ref": "N",
"aa_alt": "N",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 10,
"exon_rank_end": null,
"exon_count": 10,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "HPX",
"gene_hgnc_id": 5171,
"hgvs_c": "c.1263T>C",
"hgvs_p": "p.Asn421Asn",
"transcript": "NM_000613.3",
"protein_id": "NP_000604.1",
"transcript_support_level": null,
"aa_start": 421,
"aa_end": null,
"aa_length": 462,
"cds_start": 1263,
"cds_end": null,
"cds_length": 1389,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "ENST00000265983.8",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_000613.3"
},
{
"aa_ref": "N",
"aa_alt": "N",
"canonical": true,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 10,
"exon_rank_end": null,
"exon_count": 10,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "HPX",
"gene_hgnc_id": 5171,
"hgvs_c": "c.1263T>C",
"hgvs_p": "p.Asn421Asn",
"transcript": "ENST00000265983.8",
"protein_id": "ENSP00000265983.3",
"transcript_support_level": 1,
"aa_start": 421,
"aa_end": null,
"aa_length": 462,
"cds_start": 1263,
"cds_end": null,
"cds_length": 1389,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "NM_000613.3",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000265983.8"
},
{
"aa_ref": "N",
"aa_alt": "N",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 10,
"exon_rank_end": null,
"exon_count": 10,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "HPX",
"gene_hgnc_id": 5171,
"hgvs_c": "c.1260T>C",
"hgvs_p": "p.Asn420Asn",
"transcript": "ENST00000868746.1",
"protein_id": "ENSP00000538805.1",
"transcript_support_level": null,
"aa_start": 420,
"aa_end": null,
"aa_length": 461,
"cds_start": 1260,
"cds_end": null,
"cds_length": 1386,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000868746.1"
},
{
"aa_ref": "N",
"aa_alt": "N",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 10,
"exon_rank_end": null,
"exon_count": 10,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "HPX",
"gene_hgnc_id": 5171,
"hgvs_c": "c.1254T>C",
"hgvs_p": "p.Asn418Asn",
"transcript": "ENST00000868752.1",
"protein_id": "ENSP00000538811.1",
"transcript_support_level": null,
"aa_start": 418,
"aa_end": null,
"aa_length": 459,
"cds_start": 1254,
"cds_end": null,
"cds_length": 1380,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000868752.1"
},
{
"aa_ref": "N",
"aa_alt": "N",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 10,
"exon_rank_end": null,
"exon_count": 10,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "HPX",
"gene_hgnc_id": 5171,
"hgvs_c": "c.1251T>C",
"hgvs_p": "p.Asn417Asn",
"transcript": "ENST00000868750.1",
"protein_id": "ENSP00000538809.1",
"transcript_support_level": null,
"aa_start": 417,
"aa_end": null,
"aa_length": 458,
"cds_start": 1251,
"cds_end": null,
"cds_length": 1377,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000868750.1"
},
{
"aa_ref": "N",
"aa_alt": "N",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 10,
"exon_rank_end": null,
"exon_count": 10,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "HPX",
"gene_hgnc_id": 5171,
"hgvs_c": "c.1233T>C",
"hgvs_p": "p.Asn411Asn",
"transcript": "ENST00000868773.1",
"protein_id": "ENSP00000538832.1",
"transcript_support_level": null,
"aa_start": 411,
"aa_end": null,
"aa_length": 452,
"cds_start": 1233,
"cds_end": null,
"cds_length": 1359,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000868773.1"
},
{
"aa_ref": "N",
"aa_alt": "N",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 10,
"exon_rank_end": null,
"exon_count": 10,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "HPX",
"gene_hgnc_id": 5171,
"hgvs_c": "c.1230T>C",
"hgvs_p": "p.Asn410Asn",
"transcript": "ENST00000868753.1",
"protein_id": "ENSP00000538812.1",
"transcript_support_level": null,
"aa_start": 410,
"aa_end": null,
"aa_length": 451,
"cds_start": 1230,
"cds_end": null,
"cds_length": 1356,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000868753.1"
},
{
"aa_ref": "N",
"aa_alt": "N",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 10,
"exon_rank_end": null,
"exon_count": 10,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "HPX",
"gene_hgnc_id": 5171,
"hgvs_c": "c.1230T>C",
"hgvs_p": "p.Asn410Asn",
"transcript": "ENST00000868755.1",
"protein_id": "ENSP00000538814.1",
"transcript_support_level": null,
"aa_start": 410,
"aa_end": null,
"aa_length": 451,
"cds_start": 1230,
"cds_end": null,
"cds_length": 1356,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000868755.1"
},
{
"aa_ref": "N",
"aa_alt": "N",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 10,
"exon_rank_end": null,
"exon_count": 10,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "HPX",
"gene_hgnc_id": 5171,
"hgvs_c": "c.1227T>C",
"hgvs_p": "p.Asn409Asn",
"transcript": "ENST00000868768.1",
"protein_id": "ENSP00000538827.1",
"transcript_support_level": null,
"aa_start": 409,
"aa_end": null,
"aa_length": 450,
"cds_start": 1227,
"cds_end": null,
"cds_length": 1353,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000868768.1"
},
{
"aa_ref": "N",
"aa_alt": "N",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 9,
"exon_rank_end": null,
"exon_count": 9,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "HPX",
"gene_hgnc_id": 5171,
"hgvs_c": "c.1191T>C",
"hgvs_p": "p.Asn397Asn",
"transcript": "ENST00000868760.1",
"protein_id": "ENSP00000538819.1",
"transcript_support_level": null,
"aa_start": 397,
"aa_end": null,
"aa_length": 438,
"cds_start": 1191,
"cds_end": null,
"cds_length": 1317,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000868760.1"
},
{
"aa_ref": "N",
"aa_alt": "N",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 10,
"exon_rank_end": null,
"exon_count": 10,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "HPX",
"gene_hgnc_id": 5171,
"hgvs_c": "c.1167T>C",
"hgvs_p": "p.Asn389Asn",
"transcript": "ENST00000868751.1",
"protein_id": "ENSP00000538810.1",
"transcript_support_level": null,
"aa_start": 389,
"aa_end": null,
"aa_length": 430,
"cds_start": 1167,
"cds_end": null,
"cds_length": 1293,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000868751.1"
},
{
"aa_ref": "N",
"aa_alt": "N",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 9,
"exon_rank_end": null,
"exon_count": 9,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "HPX",
"gene_hgnc_id": 5171,
"hgvs_c": "c.1131T>C",
"hgvs_p": "p.Asn377Asn",
"transcript": "ENST00000868757.1",
"protein_id": "ENSP00000538816.1",
"transcript_support_level": null,
"aa_start": 377,
"aa_end": null,
"aa_length": 418,
"cds_start": 1131,
"cds_end": null,
"cds_length": 1257,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000868757.1"
},
{
"aa_ref": "N",
"aa_alt": "N",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 10,
"exon_rank_end": null,
"exon_count": 10,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "HPX",
"gene_hgnc_id": 5171,
"hgvs_c": "c.1119T>C",
"hgvs_p": "p.Asn373Asn",
"transcript": "ENST00000868756.1",
"protein_id": "ENSP00000538815.1",
"transcript_support_level": null,
"aa_start": 373,
"aa_end": null,
"aa_length": 414,
"cds_start": 1119,
"cds_end": null,
"cds_length": 1245,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000868756.1"
},
{
"aa_ref": "N",
"aa_alt": "N",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 9,
"exon_rank_end": null,
"exon_count": 9,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "HPX",
"gene_hgnc_id": 5171,
"hgvs_c": "c.1104T>C",
"hgvs_p": "p.Asn368Asn",
"transcript": "ENST00000868761.1",
"protein_id": "ENSP00000538820.1",
"transcript_support_level": null,
"aa_start": 368,
"aa_end": null,
"aa_length": 409,
"cds_start": 1104,
"cds_end": null,
"cds_length": 1230,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000868761.1"
},
{
"aa_ref": "N",
"aa_alt": "N",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 9,
"exon_rank_end": null,
"exon_count": 9,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "HPX",
"gene_hgnc_id": 5171,
"hgvs_c": "c.1086T>C",
"hgvs_p": "p.Asn362Asn",
"transcript": "ENST00000868759.1",
"protein_id": "ENSP00000538818.1",
"transcript_support_level": null,
"aa_start": 362,
"aa_end": null,
"aa_length": 403,
"cds_start": 1086,
"cds_end": null,
"cds_length": 1212,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000868759.1"
},
{
"aa_ref": "N",
"aa_alt": "N",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 9,
"exon_rank_end": null,
"exon_count": 9,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "HPX",
"gene_hgnc_id": 5171,
"hgvs_c": "c.1083T>C",
"hgvs_p": "p.Asn361Asn",
"transcript": "ENST00000868770.1",
"protein_id": "ENSP00000538829.1",
"transcript_support_level": null,
"aa_start": 361,
"aa_end": null,
"aa_length": 402,
"cds_start": 1083,
"cds_end": null,
"cds_length": 1209,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000868770.1"
},
{
"aa_ref": "N",
"aa_alt": "N",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 9,
"exon_rank_end": null,
"exon_count": 9,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "HPX",
"gene_hgnc_id": 5171,
"hgvs_c": "c.1050T>C",
"hgvs_p": "p.Asn350Asn",
"transcript": "ENST00000868748.1",
"protein_id": "ENSP00000538807.1",
"transcript_support_level": null,
"aa_start": 350,
"aa_end": null,
"aa_length": 391,
"cds_start": 1050,
"cds_end": null,
"cds_length": 1176,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000868748.1"
},
{
"aa_ref": "N",
"aa_alt": "N",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 9,
"exon_rank_end": null,
"exon_count": 9,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "HPX",
"gene_hgnc_id": 5171,
"hgvs_c": "c.1041T>C",
"hgvs_p": "p.Asn347Asn",
"transcript": "ENST00000868765.1",
"protein_id": "ENSP00000538824.1",
"transcript_support_level": null,
"aa_start": 347,
"aa_end": null,
"aa_length": 388,
"cds_start": 1041,
"cds_end": null,
"cds_length": 1167,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000868765.1"
},
{
"aa_ref": "N",
"aa_alt": "N",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 9,
"exon_rank_end": null,
"exon_count": 9,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "HPX",
"gene_hgnc_id": 5171,
"hgvs_c": "c.993T>C",
"hgvs_p": "p.Asn331Asn",
"transcript": "ENST00000868754.1",
"protein_id": "ENSP00000538813.1",
"transcript_support_level": null,
"aa_start": 331,
"aa_end": null,
"aa_length": 372,
"cds_start": 993,
"cds_end": null,
"cds_length": 1119,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000868754.1"
},
{
"aa_ref": "N",
"aa_alt": "N",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "HPX",
"gene_hgnc_id": 5171,
"hgvs_c": "c.987T>C",
"hgvs_p": "p.Asn329Asn",
"transcript": "ENST00000868745.1",
"protein_id": "ENSP00000538804.1",
"transcript_support_level": null,
"aa_start": 329,
"aa_end": null,
"aa_length": 370,
"cds_start": 987,
"cds_end": null,
"cds_length": 1113,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000868745.1"
},
{
"aa_ref": "N",
"aa_alt": "N",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 7,
"exon_rank_end": null,
"exon_count": 7,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "HPX",
"gene_hgnc_id": 5171,
"hgvs_c": "c.978T>C",
"hgvs_p": "p.Asn326Asn",
"transcript": "ENST00000868758.1",
"protein_id": "ENSP00000538817.1",
"transcript_support_level": null,
"aa_start": 326,
"aa_end": null,
"aa_length": 367,
"cds_start": 978,
"cds_end": null,
"cds_length": 1104,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000868758.1"
},
{
"aa_ref": "N",
"aa_alt": "N",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 9,
"exon_rank_end": null,
"exon_count": 9,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "HPX",
"gene_hgnc_id": 5171,
"hgvs_c": "c.948T>C",
"hgvs_p": "p.Asn316Asn",
"transcript": "ENST00000868775.1",
"protein_id": "ENSP00000538834.1",
"transcript_support_level": null,
"aa_start": 316,
"aa_end": null,
"aa_length": 357,
"cds_start": 948,
"cds_end": null,
"cds_length": 1074,
"cdna_start": null,
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}
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}