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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 11-6932310-CT-TC (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=11&pos=6932310&ref=CT&alt=TC&genome=hg38&allGenes=true"API Response
json
{
"message": null,
"variants": [
{
"acmg_by_gene": [
{
"benign_score": 0,
"criteria": [],
"effects": [
"missense_variant"
],
"gene_symbol": "ZNF215",
"hgnc_id": 13007,
"hgvs_c": "c.38_39delCTinsTC",
"hgvs_p": "p.Pro13Leu",
"inheritance_mode": "Unknown",
"pathogenic_score": 0,
"score": 0,
"transcript": "NM_013250.4",
"verdict": "Uncertain_significance"
},
{
"benign_score": 0,
"criteria": [],
"effects": [
"intron_variant"
],
"gene_symbol": "LOC107984019",
"hgnc_id": null,
"hgvs_c": "n.43-5149_43-5148delAGinsGA",
"hgvs_p": null,
"inheritance_mode": "",
"pathogenic_score": 0,
"score": 0,
"transcript": "XR_001748111.2",
"verdict": "Uncertain_significance"
}
],
"acmg_classification": "Uncertain_significance",
"acmg_criteria": "",
"acmg_score": 0,
"allele_count_reference_population": 0,
"alphamissense_prediction": null,
"alphamissense_score": null,
"alt": "TC",
"apogee2_prediction": null,
"apogee2_score": null,
"bayesdelnoaf_prediction": null,
"bayesdelnoaf_score": null,
"chr": "11",
"clinvar_classification": "",
"clinvar_disease": "",
"clinvar_review_status": "",
"clinvar_submissions_summary": "",
"computational_prediction_selected": null,
"computational_score_selected": null,
"computational_source_selected": null,
"consequences": [
{
"aa_alt": "L",
"aa_end": null,
"aa_length": 517,
"aa_ref": "P",
"aa_start": 13,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 3655,
"cdna_start": 623,
"cds_end": null,
"cds_length": 1554,
"cds_start": 38,
"consequences": [
"missense_variant"
],
"exon_count": 7,
"exon_rank": null,
"exon_rank_end": null,
"feature": "NM_013250.4",
"gene_hgnc_id": 13007,
"gene_symbol": "ZNF215",
"hgvs_c": "c.38_39delCTinsTC",
"hgvs_p": "p.Pro13Leu",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": "ENST00000278319.10",
"protein_coding": true,
"protein_id": "NP_037382.2",
"strand": true,
"transcript": "NM_013250.4",
"transcript_support_level": null
},
{
"aa_alt": "L",
"aa_end": null,
"aa_length": 517,
"aa_ref": "P",
"aa_start": 13,
"biotype": "protein_coding",
"canonical": true,
"cdna_end": null,
"cdna_length": 3655,
"cdna_start": 623,
"cds_end": null,
"cds_length": 1554,
"cds_start": 38,
"consequences": [
"missense_variant"
],
"exon_count": 7,
"exon_rank": null,
"exon_rank_end": null,
"feature": "ENST00000278319.10",
"gene_hgnc_id": 13007,
"gene_symbol": "ZNF215",
"hgvs_c": "c.38_39delCTinsTC",
"hgvs_p": "p.Pro13Leu",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": "NM_013250.4",
"protein_coding": true,
"protein_id": "ENSP00000278319.5",
"strand": true,
"transcript": "ENST00000278319.10",
"transcript_support_level": 1
},
{
"aa_alt": "L",
"aa_end": null,
"aa_length": 304,
"aa_ref": "P",
"aa_start": 13,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 1396,
"cdna_start": 125,
"cds_end": null,
"cds_length": 915,
"cds_start": 38,
"consequences": [
"missense_variant"
],
"exon_count": 6,
"exon_rank": null,
"exon_rank_end": null,
"feature": "ENST00000529903.1",
"gene_hgnc_id": 13007,
"gene_symbol": "ZNF215",
"hgvs_c": "c.38_39delCTinsTC",
"hgvs_p": "p.Pro13Leu",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000432306.1",
"strand": true,
"transcript": "ENST00000529903.1",
"transcript_support_level": 1
},
{
"aa_alt": "L",
"aa_end": null,
"aa_length": 518,
"aa_ref": "P",
"aa_start": 13,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 3452,
"cdna_start": 624,
"cds_end": null,
"cds_length": 1557,
"cds_start": 38,
"consequences": [
"missense_variant"
],
"exon_count": 7,
"exon_rank": null,
"exon_rank_end": null,
"feature": "ENST00000921289.1",
"gene_hgnc_id": 13007,
"gene_symbol": "ZNF215",
"hgvs_c": "c.38_39delCTinsTC",
"hgvs_p": "p.Pro13Leu",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000591348.1",
"strand": true,
"transcript": "ENST00000921289.1",
"transcript_support_level": null
},
{
"aa_alt": "L",
"aa_end": null,
"aa_length": 517,
"aa_ref": "P",
"aa_start": 13,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 3698,
"cdna_start": 666,
"cds_end": null,
"cds_length": 1554,
"cds_start": 38,
"consequences": [
"missense_variant"
],
"exon_count": 7,
"exon_rank": null,
"exon_rank_end": null,
"feature": "NM_001354853.2",
"gene_hgnc_id": 13007,
"gene_symbol": "ZNF215",
"hgvs_c": "c.38_39delCTinsTC",
"hgvs_p": "p.Pro13Leu",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "NP_001341782.1",
"strand": true,
"transcript": "NM_001354853.2",
"transcript_support_level": null
},
{
"aa_alt": "L",
"aa_end": null,
"aa_length": 517,
"aa_ref": "P",
"aa_start": 13,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 3257,
"cdna_start": 424,
"cds_end": null,
"cds_length": 1554,
"cds_start": 38,
"consequences": [
"missense_variant"
],
"exon_count": 6,
"exon_rank": null,
"exon_rank_end": null,
"feature": "ENST00000414517.6",
"gene_hgnc_id": 13007,
"gene_symbol": "ZNF215",
"hgvs_c": "c.38_39delCTinsTC",
"hgvs_p": "p.Pro13Leu",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000393202.2",
"strand": true,
"transcript": "ENST00000414517.6",
"transcript_support_level": 5
},
{
"aa_alt": "L",
"aa_end": null,
"aa_length": 517,
"aa_ref": "P",
"aa_start": 13,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 3675,
"cdna_start": 852,
"cds_end": null,
"cds_length": 1554,
"cds_start": 38,
"consequences": [
"missense_variant"
],
"exon_count": 7,
"exon_rank": null,
"exon_rank_end": null,
"feature": "ENST00000864177.1",
"gene_hgnc_id": 13007,
"gene_symbol": "ZNF215",
"hgvs_c": "c.38_39delCTinsTC",
"hgvs_p": "p.Pro13Leu",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000534236.1",
"strand": true,
"transcript": "ENST00000864177.1",
"transcript_support_level": null
},
{
"aa_alt": "L",
"aa_end": null,
"aa_length": 517,
"aa_ref": "P",
"aa_start": 13,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 3489,
"cdna_start": 666,
"cds_end": null,
"cds_length": 1554,
"cds_start": 38,
"consequences": [
"missense_variant"
],
"exon_count": 7,
"exon_rank": null,
"exon_rank_end": null,
"feature": "ENST00000864178.1",
"gene_hgnc_id": 13007,
"gene_symbol": "ZNF215",
"hgvs_c": "c.38_39delCTinsTC",
"hgvs_p": "p.Pro13Leu",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000534237.1",
"strand": true,
"transcript": "ENST00000864178.1",
"transcript_support_level": null
},
{
"aa_alt": "L",
"aa_end": null,
"aa_length": 517,
"aa_ref": "P",
"aa_start": 13,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 3481,
"cdna_start": 658,
"cds_end": null,
"cds_length": 1554,
"cds_start": 38,
"consequences": [
"missense_variant"
],
"exon_count": 7,
"exon_rank": null,
"exon_rank_end": null,
"feature": "ENST00000864179.1",
"gene_hgnc_id": 13007,
"gene_symbol": "ZNF215",
"hgvs_c": "c.38_39delCTinsTC",
"hgvs_p": "p.Pro13Leu",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000534238.1",
"strand": true,
"transcript": "ENST00000864179.1",
"transcript_support_level": null
},
{
"aa_alt": "L",
"aa_end": null,
"aa_length": 517,
"aa_ref": "P",
"aa_start": 13,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 3465,
"cdna_start": 433,
"cds_end": null,
"cds_length": 1554,
"cds_start": 38,
"consequences": [
"missense_variant"
],
"exon_count": 7,
"exon_rank": null,
"exon_rank_end": null,
"feature": "ENST00000921287.1",
"gene_hgnc_id": 13007,
"gene_symbol": "ZNF215",
"hgvs_c": "c.38_39delCTinsTC",
"hgvs_p": "p.Pro13Leu",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000591346.1",
"strand": true,
"transcript": "ENST00000921287.1",
"transcript_support_level": null
},
{
"aa_alt": "L",
"aa_end": null,
"aa_length": 517,
"aa_ref": "P",
"aa_start": 13,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 3381,
"cdna_start": 352,
"cds_end": null,
"cds_length": 1554,
"cds_start": 38,
"consequences": [
"missense_variant"
],
"exon_count": 6,
"exon_rank": null,
"exon_rank_end": null,
"feature": "ENST00000921288.1",
"gene_hgnc_id": 13007,
"gene_symbol": "ZNF215",
"hgvs_c": "c.38_39delCTinsTC",
"hgvs_p": "p.Pro13Leu",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000591347.1",
"strand": true,
"transcript": "ENST00000921288.1",
"transcript_support_level": null
},
{
"aa_alt": "L",
"aa_end": null,
"aa_length": 517,
"aa_ref": "P",
"aa_start": 13,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 3237,
"cdna_start": 407,
"cds_end": null,
"cds_length": 1554,
"cds_start": 38,
"consequences": [
"missense_variant"
],
"exon_count": 6,
"exon_rank": null,
"exon_rank_end": null,
"feature": "ENST00000921290.1",
"gene_hgnc_id": 13007,
"gene_symbol": "ZNF215",
"hgvs_c": "c.38_39delCTinsTC",
"hgvs_p": "p.Pro13Leu",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000591349.1",
"strand": true,
"transcript": "ENST00000921290.1",
"transcript_support_level": null
},
{
"aa_alt": "L",
"aa_end": null,
"aa_length": 517,
"aa_ref": "P",
"aa_start": 13,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 3391,
"cdna_start": 566,
"cds_end": null,
"cds_length": 1554,
"cds_start": 38,
"consequences": [
"missense_variant"
],
"exon_count": 7,
"exon_rank": null,
"exon_rank_end": null,
"feature": "ENST00000921291.1",
"gene_hgnc_id": 13007,
"gene_symbol": "ZNF215",
"hgvs_c": "c.38_39delCTinsTC",
"hgvs_p": "p.Pro13Leu",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000591350.1",
"strand": true,
"transcript": "ENST00000921291.1",
"transcript_support_level": null
},
{
"aa_alt": "L",
"aa_end": null,
"aa_length": 485,
"aa_ref": "P",
"aa_start": 13,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 3559,
"cdna_start": 623,
"cds_end": null,
"cds_length": 1458,
"cds_start": 38,
"consequences": [
"missense_variant"
],
"exon_count": 6,
"exon_rank": null,
"exon_rank_end": null,
"feature": "ENST00000921286.1",
"gene_hgnc_id": 13007,
"gene_symbol": "ZNF215",
"hgvs_c": "c.38_39delCTinsTC",
"hgvs_p": "p.Pro13Leu",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000591345.1",
"strand": true,
"transcript": "ENST00000921286.1",
"transcript_support_level": null
},
{
"aa_alt": "L",
"aa_end": null,
"aa_length": 304,
"aa_ref": "P",
"aa_start": 13,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 1632,
"cdna_start": 363,
"cds_end": null,
"cds_length": 915,
"cds_start": 38,
"consequences": [
"missense_variant"
],
"exon_count": 7,
"exon_rank": null,
"exon_rank_end": null,
"feature": "NM_001354854.1",
"gene_hgnc_id": 13007,
"gene_symbol": "ZNF215",
"hgvs_c": "c.38_39delCTinsTC",
"hgvs_p": "p.Pro13Leu",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "NP_001341783.1",
"strand": true,
"transcript": "NM_001354854.1",
"transcript_support_level": null
},
{
"aa_alt": "L",
"aa_end": null,
"aa_length": 304,
"aa_ref": "P",
"aa_start": 13,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 1503,
"cdna_start": 626,
"cds_end": null,
"cds_length": 915,
"cds_start": 38,
"consequences": [
"missense_variant"
],
"exon_count": 8,
"exon_rank": null,
"exon_rank_end": null,
"feature": "ENST00000610573.4",
"gene_hgnc_id": 13007,
"gene_symbol": "ZNF215",
"hgvs_c": "c.38_39delCTinsTC",
"hgvs_p": "p.Pro13Leu",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000484674.1",
"strand": true,
"transcript": "ENST00000610573.4",
"transcript_support_level": 5
},
{
"aa_alt": "L",
"aa_end": null,
"aa_length": 517,
"aa_ref": "P",
"aa_start": 13,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 3831,
"cdna_start": 799,
"cds_end": null,
"cds_length": 1554,
"cds_start": 38,
"consequences": [
"missense_variant"
],
"exon_count": 7,
"exon_rank": null,
"exon_rank_end": null,
"feature": "XM_047427566.1",
"gene_hgnc_id": 13007,
"gene_symbol": "ZNF215",
"hgvs_c": "c.38_39delCTinsTC",
"hgvs_p": "p.Pro13Leu",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "XP_047283522.1",
"strand": true,
"transcript": "XM_047427566.1",
"transcript_support_level": null
},
{
"aa_alt": "L",
"aa_end": null,
"aa_length": 517,
"aa_ref": "P",
"aa_start": 13,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 7941,
"cdna_start": 4909,
"cds_end": null,
"cds_length": 1554,
"cds_start": 38,
"consequences": [
"missense_variant"
],
"exon_count": 6,
"exon_rank": null,
"exon_rank_end": null,
"feature": "XM_047427567.1",
"gene_hgnc_id": 13007,
"gene_symbol": "ZNF215",
"hgvs_c": "c.38_39delCTinsTC",
"hgvs_p": "p.Pro13Leu",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "XP_047283523.1",
"strand": true,
"transcript": "XM_047427567.1",
"transcript_support_level": null
},
{
"aa_alt": "L",
"aa_end": null,
"aa_length": 517,
"aa_ref": "P",
"aa_start": 13,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 3513,
"cdna_start": 481,
"cds_end": null,
"cds_length": 1554,
"cds_start": 38,
"consequences": [
"missense_variant"
],
"exon_count": 7,
"exon_rank": null,
"exon_rank_end": null,
"feature": "XM_047427568.1",
"gene_hgnc_id": 13007,
"gene_symbol": "ZNF215",
"hgvs_c": "c.38_39delCTinsTC",
"hgvs_p": "p.Pro13Leu",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "XP_047283524.1",
"strand": true,
"transcript": "XM_047427568.1",
"transcript_support_level": null
},
{
"aa_alt": "L",
"aa_end": null,
"aa_length": 517,
"aa_ref": "P",
"aa_start": 13,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 8117,
"cdna_start": 5085,
"cds_end": null,
"cds_length": 1554,
"cds_start": 38,
"consequences": [
"missense_variant"
],
"exon_count": 6,
"exon_rank": null,
"exon_rank_end": null,
"feature": "XM_047427569.1",
"gene_hgnc_id": 13007,
"gene_symbol": "ZNF215",
"hgvs_c": "c.38_39delCTinsTC",
"hgvs_p": "p.Pro13Leu",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "XP_047283525.1",
"strand": true,
"transcript": "XM_047427569.1",
"transcript_support_level": null
},
{
"aa_alt": "L",
"aa_end": null,
"aa_length": 517,
"aa_ref": "P",
"aa_start": 13,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 7765,
"cdna_start": 4733,
"cds_end": null,
"cds_length": 1554,
"cds_start": 38,
"consequences": [
"missense_variant"
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