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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 11-9025798-C-G (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=11&pos=9025798&ref=C&alt=G&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "11",
"pos": 9025798,
"ref": "C",
"alt": "G",
"effect": "missense_variant",
"transcript": "NM_001367977.2",
"consequences": [
{
"aa_ref": "A",
"aa_alt": "P",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 21,
"exon_rank_end": null,
"exon_count": 23,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "SCUBE2",
"gene_hgnc_id": 30425,
"hgvs_c": "c.2758G>C",
"hgvs_p": "p.Ala920Pro",
"transcript": "NM_001367977.2",
"protein_id": "NP_001354906.1",
"transcript_support_level": null,
"aa_start": 920,
"aa_end": null,
"aa_length": 1028,
"cds_start": 2758,
"cds_end": null,
"cds_length": 3087,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "ENST00000649792.2",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001367977.2"
},
{
"aa_ref": "A",
"aa_alt": "P",
"canonical": true,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 21,
"exon_rank_end": null,
"exon_count": 23,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "SCUBE2",
"gene_hgnc_id": 30425,
"hgvs_c": "c.2758G>C",
"hgvs_p": "p.Ala920Pro",
"transcript": "ENST00000649792.2",
"protein_id": "ENSP00000497523.1",
"transcript_support_level": null,
"aa_start": 920,
"aa_end": null,
"aa_length": 1028,
"cds_start": 2758,
"cds_end": null,
"cds_length": 3087,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "NM_001367977.2",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000649792.2"
},
{
"aa_ref": "A",
"aa_alt": "P",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 16,
"exon_rank_end": null,
"exon_count": 18,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "SCUBE2",
"gene_hgnc_id": 30425,
"hgvs_c": "c.2095G>C",
"hgvs_p": "p.Ala699Pro",
"transcript": "ENST00000450649.6",
"protein_id": "ENSP00000415187.2",
"transcript_support_level": 1,
"aa_start": 699,
"aa_end": null,
"aa_length": 807,
"cds_start": 2095,
"cds_end": null,
"cds_length": 2424,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000450649.6"
},
{
"aa_ref": "A",
"aa_alt": "P",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 20,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "SCUBE2",
"gene_hgnc_id": 30425,
"hgvs_c": "c.2671G>C",
"hgvs_p": "p.Ala891Pro",
"transcript": "NM_001330199.3",
"protein_id": "NP_001317128.1",
"transcript_support_level": null,
"aa_start": 891,
"aa_end": null,
"aa_length": 999,
"cds_start": 2671,
"cds_end": null,
"cds_length": 3000,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001330199.3"
},
{
"aa_ref": "A",
"aa_alt": "P",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 20,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "SCUBE2",
"gene_hgnc_id": 30425,
"hgvs_c": "c.2671G>C",
"hgvs_p": "p.Ala891Pro",
"transcript": "ENST00000309263.7",
"protein_id": "ENSP00000310658.3",
"transcript_support_level": 5,
"aa_start": 891,
"aa_end": null,
"aa_length": 999,
"cds_start": 2671,
"cds_end": null,
"cds_length": 3000,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000309263.7"
},
{
"aa_ref": "A",
"aa_alt": "P",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 20,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "SCUBE2",
"gene_hgnc_id": 30425,
"hgvs_c": "c.2665G>C",
"hgvs_p": "p.Ala889Pro",
"transcript": "ENST00000936074.1",
"protein_id": "ENSP00000606133.1",
"transcript_support_level": null,
"aa_start": 889,
"aa_end": null,
"aa_length": 997,
"cds_start": 2665,
"cds_end": null,
"cds_length": 2994,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000936074.1"
},
{
"aa_ref": "A",
"aa_alt": "P",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 20,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "SCUBE2",
"gene_hgnc_id": 30425,
"hgvs_c": "c.2653G>C",
"hgvs_p": "p.Ala885Pro",
"transcript": "ENST00000950246.1",
"protein_id": "ENSP00000620305.1",
"transcript_support_level": null,
"aa_start": 885,
"aa_end": null,
"aa_length": 993,
"cds_start": 2653,
"cds_end": null,
"cds_length": 2982,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000950246.1"
},
{
"aa_ref": "A",
"aa_alt": "P",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 20,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "SCUBE2",
"gene_hgnc_id": 30425,
"hgvs_c": "c.2641G>C",
"hgvs_p": "p.Ala881Pro",
"transcript": "ENST00000950245.1",
"protein_id": "ENSP00000620304.1",
"transcript_support_level": null,
"aa_start": 881,
"aa_end": null,
"aa_length": 989,
"cds_start": 2641,
"cds_end": null,
"cds_length": 2970,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000950245.1"
},
{
"aa_ref": "A",
"aa_alt": "P",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 20,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "SCUBE2",
"gene_hgnc_id": 30425,
"hgvs_c": "c.2587G>C",
"hgvs_p": "p.Ala863Pro",
"transcript": "NM_020974.4",
"protein_id": "NP_066025.2",
"transcript_support_level": null,
"aa_start": 863,
"aa_end": null,
"aa_length": 971,
"cds_start": 2587,
"cds_end": null,
"cds_length": 2916,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_020974.4"
},
{
"aa_ref": "A",
"aa_alt": "P",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 20,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "SCUBE2",
"gene_hgnc_id": 30425,
"hgvs_c": "c.2587G>C",
"hgvs_p": "p.Ala863Pro",
"transcript": "ENST00000520467.5",
"protein_id": "ENSP00000429969.1",
"transcript_support_level": 2,
"aa_start": 863,
"aa_end": null,
"aa_length": 971,
"cds_start": 2587,
"cds_end": null,
"cds_length": 2916,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000520467.5"
},
{
"aa_ref": "A",
"aa_alt": "P",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 19,
"exon_rank_end": null,
"exon_count": 21,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "SCUBE2",
"gene_hgnc_id": 30425,
"hgvs_c": "c.2554G>C",
"hgvs_p": "p.Ala852Pro",
"transcript": "ENST00000899097.1",
"protein_id": "ENSP00000569156.1",
"transcript_support_level": null,
"aa_start": 852,
"aa_end": null,
"aa_length": 960,
"cds_start": 2554,
"cds_end": null,
"cds_length": 2883,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000899097.1"
},
{
"aa_ref": "A",
"aa_alt": "P",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 19,
"exon_rank_end": null,
"exon_count": 21,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "SCUBE2",
"gene_hgnc_id": 30425,
"hgvs_c": "c.2512G>C",
"hgvs_p": "p.Ala838Pro",
"transcript": "ENST00000936075.1",
"protein_id": "ENSP00000606134.1",
"transcript_support_level": null,
"aa_start": 838,
"aa_end": null,
"aa_length": 946,
"cds_start": 2512,
"cds_end": null,
"cds_length": 2841,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000936075.1"
},
{
"aa_ref": "A",
"aa_alt": "P",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 19,
"exon_rank_end": null,
"exon_count": 21,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "SCUBE2",
"gene_hgnc_id": 30425,
"hgvs_c": "c.2500G>C",
"hgvs_p": "p.Ala834Pro",
"transcript": "ENST00000950248.1",
"protein_id": "ENSP00000620307.1",
"transcript_support_level": null,
"aa_start": 834,
"aa_end": null,
"aa_length": 942,
"cds_start": 2500,
"cds_end": null,
"cds_length": 2829,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000950248.1"
},
{
"aa_ref": "A",
"aa_alt": "P",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 18,
"exon_rank_end": null,
"exon_count": 20,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "SCUBE2",
"gene_hgnc_id": 30425,
"hgvs_c": "c.2431G>C",
"hgvs_p": "p.Ala811Pro",
"transcript": "ENST00000899094.1",
"protein_id": "ENSP00000569153.1",
"transcript_support_level": null,
"aa_start": 811,
"aa_end": null,
"aa_length": 919,
"cds_start": 2431,
"cds_end": null,
"cds_length": 2760,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000899094.1"
},
{
"aa_ref": "A",
"aa_alt": "P",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 17,
"exon_rank_end": null,
"exon_count": 19,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "SCUBE2",
"gene_hgnc_id": 30425,
"hgvs_c": "c.2293G>C",
"hgvs_p": "p.Ala765Pro",
"transcript": "ENST00000950244.1",
"protein_id": "ENSP00000620303.1",
"transcript_support_level": null,
"aa_start": 765,
"aa_end": null,
"aa_length": 914,
"cds_start": 2293,
"cds_end": null,
"cds_length": 2745,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000950244.1"
},
{
"aa_ref": "A",
"aa_alt": "P",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 18,
"exon_rank_end": null,
"exon_count": 20,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "SCUBE2",
"gene_hgnc_id": 30425,
"hgvs_c": "c.2383G>C",
"hgvs_p": "p.Ala795Pro",
"transcript": "ENST00000950247.1",
"protein_id": "ENSP00000620306.1",
"transcript_support_level": null,
"aa_start": 795,
"aa_end": null,
"aa_length": 903,
"cds_start": 2383,
"cds_end": null,
"cds_length": 2712,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000950247.1"
},
{
"aa_ref": "A",
"aa_alt": "P",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 18,
"exon_rank_end": null,
"exon_count": 20,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "SCUBE2",
"gene_hgnc_id": 30425,
"hgvs_c": "c.2374G>C",
"hgvs_p": "p.Ala792Pro",
"transcript": "ENST00000950243.1",
"protein_id": "ENSP00000620302.1",
"transcript_support_level": null,
"aa_start": 792,
"aa_end": null,
"aa_length": 900,
"cds_start": 2374,
"cds_end": null,
"cds_length": 2703,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000950243.1"
},
{
"aa_ref": "A",
"aa_alt": "P",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 17,
"exon_rank_end": null,
"exon_count": 19,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "SCUBE2",
"gene_hgnc_id": 30425,
"hgvs_c": "c.2314G>C",
"hgvs_p": "p.Ala772Pro",
"transcript": "ENST00000899096.1",
"protein_id": "ENSP00000569155.1",
"transcript_support_level": null,
"aa_start": 772,
"aa_end": null,
"aa_length": 880,
"cds_start": 2314,
"cds_end": null,
"cds_length": 2643,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000899096.1"
},
{
"aa_ref": "A",
"aa_alt": "P",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 17,
"exon_rank_end": null,
"exon_count": 19,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "SCUBE2",
"gene_hgnc_id": 30425,
"hgvs_c": "c.2293G>C",
"hgvs_p": "p.Ala765Pro",
"transcript": "ENST00000899093.1",
"protein_id": "ENSP00000569152.1",
"transcript_support_level": null,
"aa_start": 765,
"aa_end": null,
"aa_length": 873,
"cds_start": 2293,
"cds_end": null,
"cds_length": 2622,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000899093.1"
},
{
"aa_ref": "A",
"aa_alt": "P",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 17,
"exon_rank_end": null,
"exon_count": 19,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "SCUBE2",
"gene_hgnc_id": 30425,
"hgvs_c": "c.2233G>C",
"hgvs_p": "p.Ala745Pro",
"transcript": "ENST00000950242.1",
"protein_id": "ENSP00000620301.1",
"transcript_support_level": null,
"aa_start": 745,
"aa_end": null,
"aa_length": 853,
"cds_start": 2233,
"cds_end": null,
"cds_length": 2562,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000950242.1"
},
{
"aa_ref": "A",
"aa_alt": "P",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 16,
"exon_rank_end": null,
"exon_count": 18,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "SCUBE2",
"gene_hgnc_id": 30425,
"hgvs_c": "c.2170G>C",
"hgvs_p": "p.Ala724Pro",
"transcript": "ENST00000950241.1",
"protein_id": "ENSP00000620300.1",
"transcript_support_level": null,
"aa_start": 724,
"aa_end": null,
"aa_length": 832,
"cds_start": 2170,
"cds_end": null,
"cds_length": 2499,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000950241.1"
},
{
"aa_ref": "A",
"aa_alt": "P",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 16,
"exon_rank_end": null,
"exon_count": 18,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "SCUBE2",
"gene_hgnc_id": 30425,
"hgvs_c": "c.2122G>C",
"hgvs_p": "p.Ala708Pro",
"transcript": "ENST00000899098.1",
"protein_id": "ENSP00000569157.1",
"transcript_support_level": null,
"aa_start": 708,
"aa_end": null,
"aa_length": 816,
"cds_start": 2122,
"cds_end": null,
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}
],
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}