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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 11-9522369-G-A (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=11&pos=9522369&ref=G&alt=A&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "11",
"pos": 9522369,
"ref": "G",
"alt": "A",
"effect": "intron_variant",
"transcript": "NM_003442.6",
"consequences": [
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 16,
"intron_rank": 14,
"intron_rank_end": null,
"gene_symbol": "ZNF143",
"gene_hgnc_id": 12928,
"hgvs_c": "c.1687-2871G>A",
"hgvs_p": null,
"transcript": "NM_003442.6",
"protein_id": "NP_003433.3",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 638,
"cds_start": null,
"cds_end": null,
"cds_length": 1917,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "ENST00000396602.7",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_003442.6"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": true,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 16,
"intron_rank": 14,
"intron_rank_end": null,
"gene_symbol": "ZNF143",
"gene_hgnc_id": 12928,
"hgvs_c": "c.1687-2871G>A",
"hgvs_p": null,
"transcript": "ENST00000396602.7",
"protein_id": "ENSP00000379847.2",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 638,
"cds_start": null,
"cds_end": null,
"cds_length": 1917,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "NM_003442.6",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000396602.7"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 16,
"intron_rank": 14,
"intron_rank_end": null,
"gene_symbol": "ZNF143",
"gene_hgnc_id": 12928,
"hgvs_c": "c.1684-2871G>A",
"hgvs_p": null,
"transcript": "ENST00000530463.5",
"protein_id": "ENSP00000432154.1",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 637,
"cds_start": null,
"cds_end": null,
"cds_length": 1914,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000530463.5"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 17,
"intron_rank": 15,
"intron_rank_end": null,
"gene_symbol": "ZNF143",
"gene_hgnc_id": 12928,
"hgvs_c": "c.1804-2871G>A",
"hgvs_p": null,
"transcript": "ENST00000965750.1",
"protein_id": "ENSP00000635809.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 677,
"cds_start": null,
"cds_end": null,
"cds_length": 2034,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000965750.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 17,
"intron_rank": 15,
"intron_rank_end": null,
"gene_symbol": "ZNF143",
"gene_hgnc_id": 12928,
"hgvs_c": "c.1801-2871G>A",
"hgvs_p": null,
"transcript": "ENST00000965749.1",
"protein_id": "ENSP00000635808.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 676,
"cds_start": null,
"cds_end": null,
"cds_length": 2031,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000965749.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 16,
"intron_rank": 14,
"intron_rank_end": null,
"gene_symbol": "ZNF143",
"gene_hgnc_id": 12928,
"hgvs_c": "c.1687-2871G>A",
"hgvs_p": null,
"transcript": "ENST00000934543.1",
"protein_id": "ENSP00000604602.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 647,
"cds_start": null,
"cds_end": null,
"cds_length": 1944,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000934543.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 16,
"intron_rank": 14,
"intron_rank_end": null,
"gene_symbol": "ZNF143",
"gene_hgnc_id": 12928,
"hgvs_c": "c.1693-2871G>A",
"hgvs_p": null,
"transcript": "ENST00000934540.1",
"protein_id": "ENSP00000604599.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 640,
"cds_start": null,
"cds_end": null,
"cds_length": 1923,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000934540.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 16,
"intron_rank": 14,
"intron_rank_end": null,
"gene_symbol": "ZNF143",
"gene_hgnc_id": 12928,
"hgvs_c": "c.1693-2871G>A",
"hgvs_p": null,
"transcript": "ENST00000965737.1",
"protein_id": "ENSP00000635796.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 640,
"cds_start": null,
"cds_end": null,
"cds_length": 1923,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000965737.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 17,
"intron_rank": 15,
"intron_rank_end": null,
"gene_symbol": "ZNF143",
"gene_hgnc_id": 12928,
"hgvs_c": "c.1687-2871G>A",
"hgvs_p": null,
"transcript": "ENST00000871183.1",
"protein_id": "ENSP00000541242.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 638,
"cds_start": null,
"cds_end": null,
"cds_length": 1917,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000871183.1"
},
{
"aa_ref": null,
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 17,
"intron_rank": 15,
"intron_rank_end": null,
"gene_symbol": "ZNF143",
"gene_hgnc_id": 12928,
"hgvs_c": "c.1687-2871G>A",
"hgvs_p": null,
"transcript": "ENST00000965741.1",
"protein_id": "ENSP00000635800.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 638,
"cds_start": null,
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"cds_length": 1917,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000965741.1"
},
{
"aa_ref": null,
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 17,
"intron_rank": 15,
"intron_rank_end": null,
"gene_symbol": "ZNF143",
"gene_hgnc_id": 12928,
"hgvs_c": "c.1687-2871G>A",
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"transcript": "ENST00000965746.1",
"protein_id": "ENSP00000635805.1",
"transcript_support_level": null,
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"cds_start": null,
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"cdna_start": null,
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"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000965746.1"
},
{
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"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 17,
"intron_rank": 15,
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"gene_symbol": "ZNF143",
"gene_hgnc_id": 12928,
"hgvs_c": "c.1687-2871G>A",
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"transcript": "ENST00000965751.1",
"protein_id": "ENSP00000635810.1",
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"aa_start": null,
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"cds_start": null,
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"cdna_start": null,
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"biotype": "protein_coding",
"feature": "ENST00000965751.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 16,
"intron_rank": 14,
"intron_rank_end": null,
"gene_symbol": "ZNF143",
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"hgvs_c": "c.1687-2871G>A",
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"transcript": "ENST00000965752.1",
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"cdna_start": null,
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"mane_select": null,
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"biotype": "protein_coding",
"feature": "ENST00000965752.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
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],
"exon_rank": null,
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"intron_rank": 14,
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"gene_symbol": "ZNF143",
"gene_hgnc_id": 12928,
"hgvs_c": "c.1684-2871G>A",
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"transcript": "NM_001282656.2",
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"biotype": "protein_coding",
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},
{
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"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 16,
"intron_rank": 14,
"intron_rank_end": null,
"gene_symbol": "ZNF143",
"gene_hgnc_id": 12928,
"hgvs_c": "c.1684-2871G>A",
"hgvs_p": null,
"transcript": "ENST00000396604.5",
"protein_id": "ENSP00000379849.1",
"transcript_support_level": 5,
"aa_start": null,
"aa_end": null,
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"cds_start": null,
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"cdna_start": null,
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"biotype": "protein_coding",
"feature": "ENST00000396604.5"
},
{
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"protein_coding": true,
"strand": true,
"consequences": [
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],
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"exon_count": 17,
"intron_rank": 15,
"intron_rank_end": null,
"gene_symbol": "ZNF143",
"gene_hgnc_id": 12928,
"hgvs_c": "c.1684-2871G>A",
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"biotype": "protein_coding",
"feature": "ENST00000871184.1"
},
{
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"protein_coding": true,
"strand": true,
"consequences": [
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],
"exon_rank": null,
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"exon_count": 17,
"intron_rank": 15,
"intron_rank_end": null,
"gene_symbol": "ZNF143",
"gene_hgnc_id": 12928,
"hgvs_c": "c.1684-2871G>A",
"hgvs_p": null,
"transcript": "ENST00000871189.1",
"protein_id": "ENSP00000541248.1",
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"feature": "ENST00000871189.1"
},
{
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"strand": true,
"consequences": [
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],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 16,
"intron_rank": 14,
"intron_rank_end": null,
"gene_symbol": "ZNF143",
"gene_hgnc_id": 12928,
"hgvs_c": "c.1684-2871G>A",
"hgvs_p": null,
"transcript": "ENST00000965748.1",
"protein_id": "ENSP00000635807.1",
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},
{
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"strand": true,
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],
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"gene_symbol": "ZNF143",
"gene_hgnc_id": 12928,
"hgvs_c": "c.1681-2871G>A",
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"transcript": "ENST00000965738.1",
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},
{
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"strand": true,
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],
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"gene_symbol": "ZNF143",
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},
{
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"strand": true,
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],
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"gene_symbol": "ZNF143",
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"hgvs_c": "c.1639-2871G>A",
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"transcript": "ENST00000934538.1",
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"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000934538.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 16,
"intron_rank": 14,
"intron_rank_end": null,
"gene_symbol": "ZNF143",
"gene_hgnc_id": 12928,
"hgvs_c": "c.1636-2871G>A",
"hgvs_p": null,
"transcript": "ENST00000934541.1",
"protein_id": "ENSP00000604600.1",
"transcript_support_level": null,
"aa_start": null,
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"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000934541.1"
},
{
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"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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}