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GeneBe API Showcase

This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.

API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.

Documentation & Advanced Usage

Complete API documentation:docs.genebe.net/docs/api/overview/

Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/

Python client for pandas:pypi.org/project/genebe/

Java CLI for VCF files:github.com/pstawinski/genebe-cli

All tools documented at:docs.genebe.net

API Request Examples for Variant: 11-95836283-GT-AC (hg38)

Bash / cURL Example

bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=11&pos=95836283&ref=GT&alt=AC&genome=hg38&allGenes=true"

API Response

json
{
  "message": null,
  "variants": [
    {
      "acmg_by_gene": [
        {
          "benign_score": 0,
          "criteria": [
            "PP3"
          ],
          "effects": [
            "missense_variant"
          ],
          "gene_symbol": "MTMR2",
          "hgnc_id": 7450,
          "hgvs_c": "c.1634_1635delACinsGT",
          "hgvs_p": "p.Asn545Ser",
          "inheritance_mode": "AR",
          "pathogenic_score": 1,
          "score": 1,
          "transcript": "NM_016156.6",
          "verdict": "Uncertain_significance"
        }
      ],
      "acmg_classification": "Uncertain_significance",
      "acmg_criteria": "PP3",
      "acmg_score": 1,
      "allele_count_reference_population": 0,
      "alphamissense_prediction": null,
      "alphamissense_score": null,
      "alt": "AC",
      "apogee2_prediction": null,
      "apogee2_score": null,
      "bayesdelnoaf_prediction": null,
      "bayesdelnoaf_score": null,
      "chr": "11",
      "clinvar_classification": "",
      "clinvar_disease": "",
      "clinvar_review_status": "",
      "clinvar_submissions_summary": "",
      "computational_prediction_selected": null,
      "computational_score_selected": null,
      "computational_source_selected": null,
      "consequences": [
        {
          "aa_alt": "S",
          "aa_end": null,
          "aa_length": 643,
          "aa_ref": "N",
          "aa_start": 545,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 4495,
          "cdna_start": 1788,
          "cds_end": null,
          "cds_length": 1932,
          "cds_start": 1634,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 15,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "NM_016156.6",
          "gene_hgnc_id": 7450,
          "gene_symbol": "MTMR2",
          "hgvs_c": "c.1634_1635delACinsGT",
          "hgvs_p": "p.Asn545Ser",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": "ENST00000346299.10",
          "protein_coding": true,
          "protein_id": "NP_057240.3",
          "strand": false,
          "transcript": "NM_016156.6",
          "transcript_support_level": null
        },
        {
          "aa_alt": "S",
          "aa_end": null,
          "aa_length": 643,
          "aa_ref": "N",
          "aa_start": 545,
          "biotype": "protein_coding",
          "canonical": true,
          "cdna_end": null,
          "cdna_length": 4495,
          "cdna_start": 1788,
          "cds_end": null,
          "cds_length": 1932,
          "cds_start": 1634,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 15,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "ENST00000346299.10",
          "gene_hgnc_id": 7450,
          "gene_symbol": "MTMR2",
          "hgvs_c": "c.1634_1635delACinsGT",
          "hgvs_p": "p.Asn545Ser",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": "NM_016156.6",
          "protein_coding": true,
          "protein_id": "ENSP00000345752.6",
          "strand": false,
          "transcript": "ENST00000346299.10",
          "transcript_support_level": 1
        },
        {
          "aa_alt": "S",
          "aa_end": null,
          "aa_length": 571,
          "aa_ref": "N",
          "aa_start": 473,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 3350,
          "cdna_start": 1852,
          "cds_end": null,
          "cds_length": 1716,
          "cds_start": 1418,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 16,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "ENST00000352297.11",
          "gene_hgnc_id": 7450,
          "gene_symbol": "MTMR2",
          "hgvs_c": "c.1418_1419delACinsGT",
          "hgvs_p": "p.Asn473Ser",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000343737.7",
          "strand": false,
          "transcript": "ENST00000352297.11",
          "transcript_support_level": 1
        },
        {
          "aa_alt": "S",
          "aa_end": null,
          "aa_length": 571,
          "aa_ref": "N",
          "aa_start": 473,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 4601,
          "cdna_start": 1896,
          "cds_end": null,
          "cds_length": 1716,
          "cds_start": 1418,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 16,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "ENST00000393223.8",
          "gene_hgnc_id": 7450,
          "gene_symbol": "MTMR2",
          "hgvs_c": "c.1418_1419delACinsGT",
          "hgvs_p": "p.Asn473Ser",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000376915.3",
          "strand": false,
          "transcript": "ENST00000393223.8",
          "transcript_support_level": 1
        },
        {
          "aa_alt": "S",
          "aa_end": null,
          "aa_length": 615,
          "aa_ref": "N",
          "aa_start": 517,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 4411,
          "cdna_start": 1704,
          "cds_end": null,
          "cds_length": 1848,
          "cds_start": 1550,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 14,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "NM_001440647.1",
          "gene_hgnc_id": 7450,
          "gene_symbol": "MTMR2",
          "hgvs_c": "c.1550_1551delACinsGT",
          "hgvs_p": "p.Asn517Ser",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "NP_001427576.1",
          "strand": false,
          "transcript": "NM_001440647.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": "S",
          "aa_end": null,
          "aa_length": 612,
          "aa_ref": "N",
          "aa_start": 514,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 4402,
          "cdna_start": 1695,
          "cds_end": null,
          "cds_length": 1839,
          "cds_start": 1541,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 14,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "NM_001440648.1",
          "gene_hgnc_id": 7450,
          "gene_symbol": "MTMR2",
          "hgvs_c": "c.1541_1542delACinsGT",
          "hgvs_p": "p.Asn514Ser",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "NP_001427577.1",
          "strand": false,
          "transcript": "NM_001440648.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": "S",
          "aa_end": null,
          "aa_length": 581,
          "aa_ref": "N",
          "aa_start": 483,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 4309,
          "cdna_start": 1602,
          "cds_end": null,
          "cds_length": 1746,
          "cds_start": 1448,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 13,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "NM_001440649.1",
          "gene_hgnc_id": 7450,
          "gene_symbol": "MTMR2",
          "hgvs_c": "c.1448_1449delACinsGT",
          "hgvs_p": "p.Asn483Ser",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "NP_001427578.1",
          "strand": false,
          "transcript": "NM_001440649.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": "S",
          "aa_end": null,
          "aa_length": 581,
          "aa_ref": "N",
          "aa_start": 483,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 4309,
          "cdna_start": 1602,
          "cds_end": null,
          "cds_length": 1746,
          "cds_start": 1448,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 14,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "NM_001440650.1",
          "gene_hgnc_id": 7450,
          "gene_symbol": "MTMR2",
          "hgvs_c": "c.1448_1449delACinsGT",
          "hgvs_p": "p.Asn483Ser",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "NP_001427579.1",
          "strand": false,
          "transcript": "NM_001440650.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": "S",
          "aa_end": null,
          "aa_length": 581,
          "aa_ref": "N",
          "aa_start": 483,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 4323,
          "cdna_start": 1618,
          "cds_end": null,
          "cds_length": 1746,
          "cds_start": 1448,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 13,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "ENST00000675022.1",
          "gene_hgnc_id": 7450,
          "gene_symbol": "MTMR2",
          "hgvs_c": "c.1448_1449delACinsGT",
          "hgvs_p": "p.Asn483Ser",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000502722.1",
          "strand": false,
          "transcript": "ENST00000675022.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": "S",
          "aa_end": null,
          "aa_length": 580,
          "aa_ref": "N",
          "aa_start": 482,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 4306,
          "cdna_start": 1599,
          "cds_end": null,
          "cds_length": 1743,
          "cds_start": 1445,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 14,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "NM_001440651.1",
          "gene_hgnc_id": 7450,
          "gene_symbol": "MTMR2",
          "hgvs_c": "c.1445_1446delACinsGT",
          "hgvs_p": "p.Asn482Ser",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "NP_001427580.1",
          "strand": false,
          "transcript": "NM_001440651.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": "S",
          "aa_end": null,
          "aa_length": 571,
          "aa_ref": "N",
          "aa_start": 473,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 4762,
          "cdna_start": 2055,
          "cds_end": null,
          "cds_length": 1716,
          "cds_start": 1418,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 18,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "NM_001243571.2",
          "gene_hgnc_id": 7450,
          "gene_symbol": "MTMR2",
          "hgvs_c": "c.1418_1419delACinsGT",
          "hgvs_p": "p.Asn473Ser",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "NP_001230500.1",
          "strand": false,
          "transcript": "NM_001243571.2",
          "transcript_support_level": null
        },
        {
          "aa_alt": "S",
          "aa_end": null,
          "aa_length": 571,
          "aa_ref": "N",
          "aa_start": 473,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 4430,
          "cdna_start": 1723,
          "cds_end": null,
          "cds_length": 1716,
          "cds_start": 1418,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 15,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "NM_001440630.1",
          "gene_hgnc_id": 7450,
          "gene_symbol": "MTMR2",
          "hgvs_c": "c.1418_1419delACinsGT",
          "hgvs_p": "p.Asn473Ser",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "NP_001427559.1",
          "strand": false,
          "transcript": "NM_001440630.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": "S",
          "aa_end": null,
          "aa_length": 571,
          "aa_ref": "N",
          "aa_start": 473,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 4846,
          "cdna_start": 2139,
          "cds_end": null,
          "cds_length": 1716,
          "cds_start": 1418,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 19,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "NM_001440631.1",
          "gene_hgnc_id": 7450,
          "gene_symbol": "MTMR2",
          "hgvs_c": "c.1418_1419delACinsGT",
          "hgvs_p": "p.Asn473Ser",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "NP_001427560.1",
          "strand": false,
          "transcript": "NM_001440631.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": "S",
          "aa_end": null,
          "aa_length": 571,
          "aa_ref": "N",
          "aa_start": 473,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 4810,
          "cdna_start": 2103,
          "cds_end": null,
          "cds_length": 1716,
          "cds_start": 1418,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 19,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "NM_001440632.1",
          "gene_hgnc_id": 7450,
          "gene_symbol": "MTMR2",
          "hgvs_c": "c.1418_1419delACinsGT",
          "hgvs_p": "p.Asn473Ser",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "NP_001427561.1",
          "strand": false,
          "transcript": "NM_001440632.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": "S",
          "aa_end": null,
          "aa_length": 571,
          "aa_ref": "N",
          "aa_start": 473,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 4785,
          "cdna_start": 2078,
          "cds_end": null,
          "cds_length": 1716,
          "cds_start": 1418,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 19,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "NM_001440633.1",
          "gene_hgnc_id": 7450,
          "gene_symbol": "MTMR2",
          "hgvs_c": "c.1418_1419delACinsGT",
          "hgvs_p": "p.Asn473Ser",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "NP_001427562.1",
          "strand": false,
          "transcript": "NM_001440633.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": "S",
          "aa_end": null,
          "aa_length": 571,
          "aa_ref": "N",
          "aa_start": 473,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 4701,
          "cdna_start": 1994,
          "cds_end": null,
          "cds_length": 1716,
          "cds_start": 1418,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 18,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "NM_001440634.1",
          "gene_hgnc_id": 7450,
          "gene_symbol": "MTMR2",
          "hgvs_c": "c.1418_1419delACinsGT",
          "hgvs_p": "p.Asn473Ser",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "NP_001427563.1",
          "strand": false,
          "transcript": "NM_001440634.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": "S",
          "aa_end": null,
          "aa_length": 571,
          "aa_ref": "N",
          "aa_start": 473,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 4389,
          "cdna_start": 1682,
          "cds_end": null,
          "cds_length": 1716,
          "cds_start": 1418,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 14,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "NM_001440635.1",
          "gene_hgnc_id": 7450,
          "gene_symbol": "MTMR2",
          "hgvs_c": "c.1418_1419delACinsGT",
          "hgvs_p": "p.Asn473Ser",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "NP_001427564.1",
          "strand": false,
          "transcript": "NM_001440635.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": "S",
          "aa_end": null,
          "aa_length": 571,
          "aa_ref": "N",
          "aa_start": 473,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 4520,
          "cdna_start": 1813,
          "cds_end": null,
          "cds_length": 1716,
          "cds_start": 1418,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 16,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "NM_001440636.1",
          "gene_hgnc_id": 7450,
          "gene_symbol": "MTMR2",
          "hgvs_c": "c.1418_1419delACinsGT",
          "hgvs_p": "p.Asn473Ser",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "NP_001427565.1",
          "strand": false,
          "transcript": "NM_001440636.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": "S",
          "aa_end": null,
          "aa_length": 571,
          "aa_ref": "N",
          "aa_start": 473,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 4424,
          "cdna_start": 1717,
          "cds_end": null,
          "cds_length": 1716,
          "cds_start": 1418,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 15,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "NM_001440637.1",
          "gene_hgnc_id": 7450,
          "gene_symbol": "MTMR2",
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For research and educational, non-commercial use only. Not for clinical or diagnostic use. GeneBe does not provide medical advice. Data use for AI modeling is prohibited: if used, the cost is $0.001 per byte of downloaded uncompressed data.