← Back to variant description

GeneBe API Showcase

This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.

API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.

Documentation & Advanced Usage

Complete API documentation:docs.genebe.net/docs/api/overview/

Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/

Python client for pandas:pypi.org/project/genebe/

Java CLI for VCF files:github.com/pstawinski/genebe-cli

All tools documented at:docs.genebe.net

API Request Examples for Variant: 14-52864426-T-C (hg38)

Bash / cURL Example

bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=14&pos=52864426&ref=T&alt=C&genome=hg38&allGenes=true"

API Response

json
{
  "variants": [
    {
      "chr": "14",
      "pos": 52864426,
      "ref": "T",
      "alt": "C",
      "effect": "missense_variant",
      "transcript": "NM_006832.3",
      "consequences": [
        {
          "aa_ref": "Y",
          "aa_alt": "C",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 12,
          "exon_rank_end": null,
          "exon_count": 15,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "FERMT2",
          "gene_hgnc_id": 15767,
          "hgvs_c": "c.1577A>G",
          "hgvs_p": "p.Tyr526Cys",
          "transcript": "NM_006832.3",
          "protein_id": "NP_006823.1",
          "transcript_support_level": null,
          "aa_start": 526,
          "aa_end": null,
          "aa_length": 680,
          "cds_start": 1577,
          "cds_end": null,
          "cds_length": 2043,
          "cdna_start": 1716,
          "cdna_end": null,
          "cdna_length": 3286,
          "mane_select": "ENST00000341590.8",
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "Y",
          "aa_alt": "C",
          "canonical": true,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 12,
          "exon_rank_end": null,
          "exon_count": 15,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "FERMT2",
          "gene_hgnc_id": 15767,
          "hgvs_c": "c.1577A>G",
          "hgvs_p": "p.Tyr526Cys",
          "transcript": "ENST00000341590.8",
          "protein_id": "ENSP00000340391.3",
          "transcript_support_level": 1,
          "aa_start": 526,
          "aa_end": null,
          "aa_length": 680,
          "cds_start": 1577,
          "cds_end": null,
          "cds_length": 2043,
          "cdna_start": 1716,
          "cdna_end": null,
          "cdna_length": 3286,
          "mane_select": "NM_006832.3",
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "Y",
          "aa_alt": "C",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 11,
          "exon_rank_end": null,
          "exon_count": 15,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "FERMT2",
          "gene_hgnc_id": 15767,
          "hgvs_c": "c.1577A>G",
          "hgvs_p": "p.Tyr526Cys",
          "transcript": "ENST00000553373.5",
          "protein_id": "ENSP00000451084.1",
          "transcript_support_level": 1,
          "aa_start": 526,
          "aa_end": null,
          "aa_length": 687,
          "cds_start": 1577,
          "cds_end": null,
          "cds_length": 2064,
          "cdna_start": 1577,
          "cdna_end": null,
          "cdna_length": 2064,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "Y",
          "aa_alt": "C",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 12,
          "exon_rank_end": null,
          "exon_count": 15,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "FERMT2",
          "gene_hgnc_id": 15767,
          "hgvs_c": "c.1577A>G",
          "hgvs_p": "p.Tyr526Cys",
          "transcript": "ENST00000395631.6",
          "protein_id": "ENSP00000378993.2",
          "transcript_support_level": 1,
          "aa_start": 526,
          "aa_end": null,
          "aa_length": 680,
          "cds_start": 1577,
          "cds_end": null,
          "cds_length": 2043,
          "cdna_start": 1794,
          "cdna_end": null,
          "cdna_length": 3369,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "Y",
          "aa_alt": "C",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 12,
          "exon_rank_end": null,
          "exon_count": 15,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "FERMT2",
          "gene_hgnc_id": 15767,
          "hgvs_c": "c.1577A>G",
          "hgvs_p": "p.Tyr526Cys",
          "transcript": "ENST00000399304.7",
          "protein_id": "ENSP00000382243.3",
          "transcript_support_level": 1,
          "aa_start": 526,
          "aa_end": null,
          "aa_length": 633,
          "cds_start": 1577,
          "cds_end": null,
          "cds_length": 1902,
          "cdna_start": 1684,
          "cdna_end": null,
          "cdna_length": 2082,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "Y",
          "aa_alt": "C",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 12,
          "exon_rank_end": null,
          "exon_count": 16,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "FERMT2",
          "gene_hgnc_id": 15767,
          "hgvs_c": "c.1577A>G",
          "hgvs_p": "p.Tyr526Cys",
          "transcript": "NM_001134999.2",
          "protein_id": "NP_001128471.1",
          "transcript_support_level": null,
          "aa_start": 526,
          "aa_end": null,
          "aa_length": 687,
          "cds_start": 1577,
          "cds_end": null,
          "cds_length": 2064,
          "cdna_start": 1716,
          "cdna_end": null,
          "cdna_length": 3307,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "Y",
          "aa_alt": "C",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 12,
          "exon_rank_end": null,
          "exon_count": 16,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "FERMT2",
          "gene_hgnc_id": 15767,
          "hgvs_c": "c.1577A>G",
          "hgvs_p": "p.Tyr526Cys",
          "transcript": "ENST00000343279.8",
          "protein_id": "ENSP00000342858.4",
          "transcript_support_level": 5,
          "aa_start": 526,
          "aa_end": null,
          "aa_length": 687,
          "cds_start": 1577,
          "cds_end": null,
          "cds_length": 2064,
          "cdna_start": 1658,
          "cdna_end": null,
          "cdna_length": 3247,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "Y",
          "aa_alt": "C",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 11,
          "exon_rank_end": null,
          "exon_count": 15,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "FERMT2",
          "gene_hgnc_id": 15767,
          "hgvs_c": "c.1436A>G",
          "hgvs_p": "p.Tyr479Cys",
          "transcript": "ENST00000554152.5",
          "protein_id": "ENSP00000450741.1",
          "transcript_support_level": 5,
          "aa_start": 479,
          "aa_end": null,
          "aa_length": 640,
          "cds_start": 1436,
          "cds_end": null,
          "cds_length": 1923,
          "cdna_start": 1436,
          "cdna_end": null,
          "cdna_length": 3029,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "Y",
          "aa_alt": "C",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 12,
          "exon_rank_end": null,
          "exon_count": 15,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "FERMT2",
          "gene_hgnc_id": 15767,
          "hgvs_c": "c.1577A>G",
          "hgvs_p": "p.Tyr526Cys",
          "transcript": "NM_001135000.2",
          "protein_id": "NP_001128472.1",
          "transcript_support_level": null,
          "aa_start": 526,
          "aa_end": null,
          "aa_length": 633,
          "cds_start": 1577,
          "cds_end": null,
          "cds_length": 1902,
          "cdna_start": 1716,
          "cdna_end": null,
          "cdna_length": 2296,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "Y",
          "aa_alt": "C",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 10,
          "exon_rank_end": null,
          "exon_count": 15,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "FERMT2",
          "gene_hgnc_id": 15767,
          "hgvs_c": "c.1124A>G",
          "hgvs_p": "p.Tyr375Cys",
          "transcript": "ENST00000635305.1",
          "protein_id": "ENSP00000489609.1",
          "transcript_support_level": 5,
          "aa_start": 375,
          "aa_end": null,
          "aa_length": 544,
          "cds_start": 1124,
          "cds_end": null,
          "cds_length": 1635,
          "cdna_start": 1125,
          "cdna_end": null,
          "cdna_length": 2482,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "Y",
          "aa_alt": "C",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 1,
          "exon_rank_end": null,
          "exon_count": 3,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "FERMT2",
          "gene_hgnc_id": 15767,
          "hgvs_c": "c.95A>G",
          "hgvs_p": "p.Tyr32Cys",
          "transcript": "ENST00000553663.5",
          "protein_id": "ENSP00000451134.1",
          "transcript_support_level": 3,
          "aa_start": 32,
          "aa_end": null,
          "aa_length": 132,
          "cds_start": 95,
          "cds_end": null,
          "cds_length": 399,
          "cdna_start": 96,
          "cdna_end": null,
          "cdna_length": 655,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "Y",
          "aa_alt": "C",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 13,
          "exon_rank_end": null,
          "exon_count": 18,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "FERMT2",
          "gene_hgnc_id": 15767,
          "hgvs_c": "c.1610A>G",
          "hgvs_p": "p.Tyr537Cys",
          "transcript": "XM_006720008.4",
          "protein_id": "XP_006720071.1",
          "transcript_support_level": null,
          "aa_start": 537,
          "aa_end": null,
          "aa_length": 706,
          "cds_start": 1610,
          "cds_end": null,
          "cds_length": 2121,
          "cdna_start": 1749,
          "cdna_end": null,
          "cdna_length": 3364,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "Y",
          "aa_alt": "C",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 13,
          "exon_rank_end": null,
          "exon_count": 17,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "FERMT2",
          "gene_hgnc_id": 15767,
          "hgvs_c": "c.1610A>G",
          "hgvs_p": "p.Tyr537Cys",
          "transcript": "XM_006720009.4",
          "protein_id": "XP_006720072.1",
          "transcript_support_level": null,
          "aa_start": 537,
          "aa_end": null,
          "aa_length": 698,
          "cds_start": 1610,
          "cds_end": null,
          "cds_length": 2097,
          "cdna_start": 1749,
          "cdna_end": null,
          "cdna_length": 3340,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "Y",
          "aa_alt": "C",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 12,
          "exon_rank_end": null,
          "exon_count": 17,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "FERMT2",
          "gene_hgnc_id": 15767,
          "hgvs_c": "c.1577A>G",
          "hgvs_p": "p.Tyr526Cys",
          "transcript": "XM_006720010.4",
          "protein_id": "XP_006720073.1",
          "transcript_support_level": null,
          "aa_start": 526,
          "aa_end": null,
          "aa_length": 695,
          "cds_start": 1577,
          "cds_end": null,
          "cds_length": 2088,
          "cdna_start": 1716,
          "cdna_end": null,
          "cdna_length": 3331,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "Y",
          "aa_alt": "C",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 13,
          "exon_rank_end": null,
          "exon_count": 16,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "FERMT2",
          "gene_hgnc_id": 15767,
          "hgvs_c": "c.1610A>G",
          "hgvs_p": "p.Tyr537Cys",
          "transcript": "XM_005267285.4",
          "protein_id": "XP_005267342.1",
          "transcript_support_level": null,
          "aa_start": 537,
          "aa_end": null,
          "aa_length": 691,
          "cds_start": 1610,
          "cds_end": null,
          "cds_length": 2076,
          "cdna_start": 1749,
          "cdna_end": null,
          "cdna_length": 3319,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 4,
          "exon_rank_end": null,
          "exon_count": 7,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "FERMT2",
          "gene_hgnc_id": 15767,
          "hgvs_c": "n.478A>G",
          "hgvs_p": null,
          "transcript": "ENST00000553768.1",
          "protein_id": null,
          "transcript_support_level": 3,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 791,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": true,
          "consequences": [
            "splice_region_variant",
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 2,
          "exon_rank_end": null,
          "exon_count": 2,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ENSG00000285664",
          "gene_hgnc_id": null,
          "hgvs_c": "n.565T>C",
          "hgvs_p": null,
          "transcript": "ENST00000740963.1",
          "protein_id": null,
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 1046,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": true,
          "consequences": [
            "splice_region_variant",
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 3,
          "exon_rank_end": null,
          "exon_count": 3,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ENSG00000285664",
          "gene_hgnc_id": null,
          "hgvs_c": "n.543T>C",
          "hgvs_p": null,
          "transcript": "ENST00000740964.1",
          "protein_id": null,
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 822,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": true,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 6,
          "intron_rank": 3,
          "intron_rank_end": null,
          "gene_symbol": "ENSG00000285664",
          "gene_hgnc_id": null,
          "hgvs_c": "n.668+31938T>C",
          "hgvs_p": null,
          "transcript": "ENST00000649005.1",
          "protein_id": null,
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 2500,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": true,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 3,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "ENSG00000285664",
          "gene_hgnc_id": null,
          "hgvs_c": "n.410-33647T>C",
          "hgvs_p": null,
          "transcript": "ENST00000653549.1",
          "protein_id": null,
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 1954,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": true,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 4,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "ENSG00000285664",
          "gene_hgnc_id": null,
          "hgvs_c": "n.572-33647T>C",
          "hgvs_p": null,
          "transcript": "ENST00000654071.1",
          "protein_id": null,
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 2569,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": true,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 4,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "ENSG00000285664",
          "gene_hgnc_id": null,
          "hgvs_c": "n.550-33647T>C",
          "hgvs_p": null,
          "transcript": "ENST00000658290.1",
          "protein_id": null,
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 2105,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": true,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 2,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "ENSG00000285664",
          "gene_hgnc_id": null,
          "hgvs_c": "n.550-33647T>C",
          "hgvs_p": null,
          "transcript": "ENST00000670923.2",
          "protein_id": null,
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 3568,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": true,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 3,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "ENSG00000285664",
          "gene_hgnc_id": null,
          "hgvs_c": "n.550-33647T>C",
          "hgvs_p": null,
          "transcript": "ENST00000740961.1",
          "protein_id": null,
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 748,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": true,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 3,
          "intron_rank": 2,
          "intron_rank_end": null,
          "gene_symbol": "ENSG00000285664",
          "gene_hgnc_id": null,
          "hgvs_c": "n.635-33647T>C",
          "hgvs_p": null,
          "transcript": "ENST00000740962.1",
          "protein_id": null,
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 1656,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": true,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 3,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "LOC105370500",
          "gene_hgnc_id": null,
          "hgvs_c": "n.540-33647T>C",
          "hgvs_p": null,
          "transcript": "XR_007064167.1",
          "protein_id": null,
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 793,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": true,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 3,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "LOC105370500",
          "gene_hgnc_id": null,
          "hgvs_c": "n.540-33647T>C",
          "hgvs_p": null,
          "transcript": "XR_943867.3",
          "protein_id": null,
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 2499,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        }
      ],
      "gene_symbol": "FERMT2",
      "gene_hgnc_id": 15767,
      "dbsnp": "rs1427546535",
      "frequency_reference_population": 0.0000105366635,
      "hom_count_reference_population": 0,
      "allele_count_reference_population": 17,
      "gnomad_exomes_af": 0.00000889691,
      "gnomad_genomes_af": 0.0000262757,
      "gnomad_exomes_ac": 13,
      "gnomad_genomes_ac": 4,
      "gnomad_exomes_homalt": 0,
      "gnomad_genomes_homalt": 0,
      "gnomad_mito_homoplasmic": null,
      "gnomad_mito_heteroplasmic": null,
      "computational_score_selected": 0.6725766658782959,
      "computational_prediction_selected": "Uncertain_significance",
      "computational_source_selected": "MetaRNN",
      "splice_score_selected": 0,
      "splice_prediction_selected": "Benign",
      "splice_source_selected": "max_spliceai",
      "revel_score": 0.459,
      "revel_prediction": "Uncertain_significance",
      "alphamissense_score": 0.32,
      "alphamissense_prediction": null,
      "bayesdelnoaf_score": 0.07,
      "bayesdelnoaf_prediction": "Uncertain_significance",
      "phylop100way_score": 7.951,
      "phylop100way_prediction": "Pathogenic",
      "spliceai_max_score": 0,
      "spliceai_max_prediction": "Benign",
      "dbscsnv_ada_score": null,
      "dbscsnv_ada_prediction": null,
      "apogee2_score": null,
      "apogee2_prediction": null,
      "mitotip_score": null,
      "mitotip_prediction": null,
      "acmg_score": -4,
      "acmg_classification": "Likely_benign",
      "acmg_criteria": "BS2",
      "acmg_by_gene": [
        {
          "score": -4,
          "benign_score": 4,
          "pathogenic_score": 0,
          "criteria": [
            "BS2"
          ],
          "verdict": "Likely_benign",
          "transcript": "NM_006832.3",
          "gene_symbol": "FERMT2",
          "hgnc_id": 15767,
          "effects": [
            "missense_variant"
          ],
          "inheritance_mode": "AD",
          "hgvs_c": "c.1577A>G",
          "hgvs_p": "p.Tyr526Cys"
        },
        {
          "score": 2,
          "benign_score": 0,
          "pathogenic_score": 2,
          "criteria": [
            "PM2"
          ],
          "verdict": "Uncertain_significance",
          "transcript": "ENST00000740963.1",
          "gene_symbol": "ENSG00000285664",
          "hgnc_id": null,
          "effects": [
            "splice_region_variant",
            "non_coding_transcript_exon_variant"
          ],
          "inheritance_mode": "",
          "hgvs_c": "n.565T>C",
          "hgvs_p": null
        },
        {
          "score": 2,
          "benign_score": 0,
          "pathogenic_score": 2,
          "criteria": [
            "PM2"
          ],
          "verdict": "Uncertain_significance",
          "transcript": "XR_943867.3",
          "gene_symbol": "LOC105370500",
          "hgnc_id": null,
          "effects": [
            "intron_variant"
          ],
          "inheritance_mode": "",
          "hgvs_c": "n.540-33647T>C",
          "hgvs_p": null
        }
      ],
      "clinvar_disease": "not specified",
      "clinvar_classification": "Uncertain significance",
      "clinvar_review_status": "criteria provided, single submitter",
      "clinvar_submissions_summary": "US:1",
      "phenotype_combined": "not specified",
      "pathogenicity_classification_combined": "Uncertain significance",
      "custom_annotations": null
    }
  ],
  "message": null
}