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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 14-64458272-C-T (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=14&pos=64458272&ref=C&alt=T&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "14",
"pos": 64458272,
"ref": "C",
"alt": "T",
"effect": "missense_variant",
"transcript": "NM_005956.4",
"consequences": [
{
"aa_ref": "P",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 27,
"exon_rank_end": null,
"exon_count": 28,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MTHFD1",
"gene_hgnc_id": 7432,
"hgvs_c": "c.2777C>T",
"hgvs_p": "p.Pro926Leu",
"transcript": "NM_005956.4",
"protein_id": "NP_005947.3",
"transcript_support_level": null,
"aa_start": 926,
"aa_end": null,
"aa_length": 935,
"cds_start": 2777,
"cds_end": null,
"cds_length": 2808,
"cdna_start": 2852,
"cdna_end": null,
"cdna_length": 3154,
"mane_select": "ENST00000652337.1",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_005956.4"
},
{
"aa_ref": "P",
"aa_alt": "L",
"canonical": true,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 27,
"exon_rank_end": null,
"exon_count": 28,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MTHFD1",
"gene_hgnc_id": 7432,
"hgvs_c": "c.2777C>T",
"hgvs_p": "p.Pro926Leu",
"transcript": "ENST00000652337.1",
"protein_id": "ENSP00000498336.1",
"transcript_support_level": null,
"aa_start": 926,
"aa_end": null,
"aa_length": 935,
"cds_start": 2777,
"cds_end": null,
"cds_length": 2808,
"cdna_start": 2852,
"cdna_end": null,
"cdna_length": 3154,
"mane_select": "NM_005956.4",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000652337.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 3,
"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "ZBTB25",
"gene_hgnc_id": 13112,
"hgvs_c": "c.174-8634G>A",
"hgvs_p": null,
"transcript": "ENST00000555220.5",
"protein_id": "ENSP00000450718.1",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 86,
"cds_start": null,
"cds_end": null,
"cds_length": 261,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 1440,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000555220.5"
},
{
"aa_ref": "P",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 28,
"exon_rank_end": null,
"exon_count": 29,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MTHFD1",
"gene_hgnc_id": 7432,
"hgvs_c": "c.2858C>T",
"hgvs_p": "p.Pro953Leu",
"transcript": "ENST00000900031.1",
"protein_id": "ENSP00000570090.1",
"transcript_support_level": null,
"aa_start": 953,
"aa_end": null,
"aa_length": 962,
"cds_start": 2858,
"cds_end": null,
"cds_length": 2889,
"cdna_start": 2901,
"cdna_end": null,
"cdna_length": 3182,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000900031.1"
},
{
"aa_ref": "P",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 27,
"exon_rank_end": null,
"exon_count": 28,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MTHFD1",
"gene_hgnc_id": 7432,
"hgvs_c": "c.2828C>T",
"hgvs_p": "p.Pro943Leu",
"transcript": "ENST00000940490.1",
"protein_id": "ENSP00000610549.1",
"transcript_support_level": null,
"aa_start": 943,
"aa_end": null,
"aa_length": 952,
"cds_start": 2828,
"cds_end": null,
"cds_length": 2859,
"cdna_start": 2937,
"cdna_end": null,
"cdna_length": 3219,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000940490.1"
},
{
"aa_ref": "P",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 27,
"exon_rank_end": null,
"exon_count": 27,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MTHFD1",
"gene_hgnc_id": 7432,
"hgvs_c": "c.2777C>T",
"hgvs_p": "p.Pro926Leu",
"transcript": "ENST00000940495.1",
"protein_id": "ENSP00000610554.1",
"transcript_support_level": null,
"aa_start": 926,
"aa_end": null,
"aa_length": 935,
"cds_start": 2777,
"cds_end": null,
"cds_length": 2808,
"cdna_start": 2851,
"cdna_end": null,
"cdna_length": 4581,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000940495.1"
},
{
"aa_ref": "P",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 27,
"exon_rank_end": null,
"exon_count": 28,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MTHFD1",
"gene_hgnc_id": 7432,
"hgvs_c": "c.2777C>T",
"hgvs_p": "p.Pro926Leu",
"transcript": "ENST00000941180.1",
"protein_id": "ENSP00000611239.1",
"transcript_support_level": null,
"aa_start": 926,
"aa_end": null,
"aa_length": 935,
"cds_start": 2777,
"cds_end": null,
"cds_length": 2808,
"cdna_start": 2852,
"cdna_end": null,
"cdna_length": 3019,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000941180.1"
},
{
"aa_ref": "P",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 27,
"exon_rank_end": null,
"exon_count": 28,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MTHFD1",
"gene_hgnc_id": 7432,
"hgvs_c": "c.2768C>T",
"hgvs_p": "p.Pro923Leu",
"transcript": "ENST00000900023.1",
"protein_id": "ENSP00000570082.1",
"transcript_support_level": null,
"aa_start": 923,
"aa_end": null,
"aa_length": 932,
"cds_start": 2768,
"cds_end": null,
"cds_length": 2799,
"cdna_start": 2868,
"cdna_end": null,
"cdna_length": 3152,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000900023.1"
},
{
"aa_ref": "P",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 27,
"exon_rank_end": null,
"exon_count": 28,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MTHFD1",
"gene_hgnc_id": 7432,
"hgvs_c": "c.2750C>T",
"hgvs_p": "p.Pro917Leu",
"transcript": "ENST00000940488.1",
"protein_id": "ENSP00000610547.1",
"transcript_support_level": null,
"aa_start": 917,
"aa_end": null,
"aa_length": 926,
"cds_start": 2750,
"cds_end": null,
"cds_length": 2781,
"cdna_start": 2872,
"cdna_end": null,
"cdna_length": 3156,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000940488.1"
},
{
"aa_ref": "P",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 26,
"exon_rank_end": null,
"exon_count": 27,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MTHFD1",
"gene_hgnc_id": 7432,
"hgvs_c": "c.2708C>T",
"hgvs_p": "p.Pro903Leu",
"transcript": "ENST00000900025.1",
"protein_id": "ENSP00000570084.1",
"transcript_support_level": null,
"aa_start": 903,
"aa_end": null,
"aa_length": 912,
"cds_start": 2708,
"cds_end": null,
"cds_length": 2739,
"cdna_start": 2793,
"cdna_end": null,
"cdna_length": 3075,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000900025.1"
},
{
"aa_ref": "P",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 26,
"exon_rank_end": null,
"exon_count": 27,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MTHFD1",
"gene_hgnc_id": 7432,
"hgvs_c": "c.2636C>T",
"hgvs_p": "p.Pro879Leu",
"transcript": "ENST00000940494.1",
"protein_id": "ENSP00000610553.1",
"transcript_support_level": null,
"aa_start": 879,
"aa_end": null,
"aa_length": 888,
"cds_start": 2636,
"cds_end": null,
"cds_length": 2667,
"cdna_start": 2724,
"cdna_end": null,
"cdna_length": 3006,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000940494.1"
},
{
"aa_ref": "P",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 26,
"exon_rank_end": null,
"exon_count": 27,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MTHFD1",
"gene_hgnc_id": 7432,
"hgvs_c": "c.2630C>T",
"hgvs_p": "p.Pro877Leu",
"transcript": "ENST00000940489.1",
"protein_id": "ENSP00000610548.1",
"transcript_support_level": null,
"aa_start": 877,
"aa_end": null,
"aa_length": 886,
"cds_start": 2630,
"cds_end": null,
"cds_length": 2661,
"cdna_start": 2752,
"cdna_end": null,
"cdna_length": 3034,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000940489.1"
},
{
"aa_ref": "P",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 26,
"exon_rank_end": null,
"exon_count": 27,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MTHFD1",
"gene_hgnc_id": 7432,
"hgvs_c": "c.2624C>T",
"hgvs_p": "p.Pro875Leu",
"transcript": "ENST00000697168.1",
"protein_id": "ENSP00000513156.1",
"transcript_support_level": null,
"aa_start": 875,
"aa_end": null,
"aa_length": 884,
"cds_start": 2624,
"cds_end": null,
"cds_length": 2655,
"cdna_start": 2773,
"cdna_end": null,
"cdna_length": 3038,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000697168.1"
},
{
"aa_ref": "P",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 26,
"exon_rank_end": null,
"exon_count": 27,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MTHFD1",
"gene_hgnc_id": 7432,
"hgvs_c": "c.2624C>T",
"hgvs_p": "p.Pro875Leu",
"transcript": "ENST00000940486.1",
"protein_id": "ENSP00000610545.1",
"transcript_support_level": null,
"aa_start": 875,
"aa_end": null,
"aa_length": 884,
"cds_start": 2624,
"cds_end": null,
"cds_length": 2655,
"cdna_start": 2745,
"cdna_end": null,
"cdna_length": 3041,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000940486.1"
},
{
"aa_ref": "P",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 25,
"exon_rank_end": null,
"exon_count": 26,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MTHFD1",
"gene_hgnc_id": 7432,
"hgvs_c": "c.2567C>T",
"hgvs_p": "p.Pro856Leu",
"transcript": "ENST00000940485.1",
"protein_id": "ENSP00000610544.1",
"transcript_support_level": null,
"aa_start": 856,
"aa_end": null,
"aa_length": 865,
"cds_start": 2567,
"cds_end": null,
"cds_length": 2598,
"cdna_start": 2719,
"cdna_end": null,
"cdna_length": 3001,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000940485.1"
},
{
"aa_ref": "P",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 25,
"exon_rank_end": null,
"exon_count": 26,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MTHFD1",
"gene_hgnc_id": 7432,
"hgvs_c": "c.2537C>T",
"hgvs_p": "p.Pro846Leu",
"transcript": "ENST00000900024.1",
"protein_id": "ENSP00000570083.1",
"transcript_support_level": null,
"aa_start": 846,
"aa_end": null,
"aa_length": 855,
"cds_start": 2537,
"cds_end": null,
"cds_length": 2568,
"cdna_start": 2622,
"cdna_end": null,
"cdna_length": 2906,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000900024.1"
},
{
"aa_ref": "P",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 28,
"exon_rank_end": null,
"exon_count": 29,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MTHFD1",
"gene_hgnc_id": 7432,
"hgvs_c": "c.2534C>T",
"hgvs_p": "p.Pro845Leu",
"transcript": "ENST00000554768.6",
"protein_id": "ENSP00000477501.2",
"transcript_support_level": 4,
"aa_start": 845,
"aa_end": null,
"aa_length": 854,
"cds_start": 2534,
"cds_end": null,
"cds_length": 2565,
"cdna_start": 3022,
"cdna_end": null,
"cdna_length": 3295,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000554768.6"
},
{
"aa_ref": "P",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 27,
"exon_rank_end": null,
"exon_count": 28,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MTHFD1",
"gene_hgnc_id": 7432,
"hgvs_c": "c.2534C>T",
"hgvs_p": "p.Pro845Leu",
"transcript": "ENST00000557539.2",
"protein_id": "ENSP00000476468.2",
"transcript_support_level": 4,
"aa_start": 845,
"aa_end": null,
"aa_length": 854,
"cds_start": 2534,
"cds_end": null,
"cds_length": 2565,
"cdna_start": 2940,
"cdna_end": null,
"cdna_length": 3732,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000557539.2"
},
{
"aa_ref": "P",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 29,
"exon_rank_end": null,
"exon_count": 30,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MTHFD1",
"gene_hgnc_id": 7432,
"hgvs_c": "c.2534C>T",
"hgvs_p": "p.Pro845Leu",
"transcript": "ENST00000697173.1",
"protein_id": "ENSP00000513159.1",
"transcript_support_level": null,
"aa_start": 845,
"aa_end": null,
"aa_length": 854,
"cds_start": 2534,
"cds_end": null,
"cds_length": 2565,
"cdna_start": 3166,
"cdna_end": null,
"cdna_length": 3958,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000697173.1"
},
{
"aa_ref": "P",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 25,
"exon_rank_end": null,
"exon_count": 26,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MTHFD1",
"gene_hgnc_id": 7432,
"hgvs_c": "c.2528C>T",
"hgvs_p": "p.Pro843Leu",
"transcript": "ENST00000697174.1",
"protein_id": "ENSP00000513160.1",
"transcript_support_level": null,
"aa_start": 843,
"aa_end": null,
"aa_length": 852,
"cds_start": 2528,
"cds_end": null,
"cds_length": 2559,
"cdna_start": 2590,
"cdna_end": null,
"cdna_length": 2897,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000697174.1"
},
{
"aa_ref": "P",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 25,
"exon_rank_end": null,
"exon_count": 26,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MTHFD1",
"gene_hgnc_id": 7432,
"hgvs_c": "c.2525C>T",
"hgvs_p": "p.Pro842Leu",
"transcript": "ENST00000940496.1",
"protein_id": "ENSP00000610555.1",
"transcript_support_level": null,
"aa_start": 842,
"aa_end": null,
"aa_length": 851,
"cds_start": 2525,
"cds_end": null,
"cds_length": 2556,
"cdna_start": 2591,
"cdna_end": null,
"cdna_length": 2873,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000940496.1"
},
{
"aa_ref": "P",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 25,
"exon_rank_end": null,
"exon_count": 26,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MTHFD1",
"gene_hgnc_id": 7432,
"hgvs_c": "c.2516C>T",
"hgvs_p": "p.Pro839Leu",
"transcript": "ENST00000900022.1",
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}
],
"message": null
}