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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 14-73198057-G-A (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=14&pos=73198057&ref=G&alt=A&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "14",
"pos": 73198057,
"ref": "G",
"alt": "A",
"effect": "missense_variant",
"transcript": "ENST00000324501.10",
"consequences": [
{
"aa_ref": "G",
"aa_alt": "S",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PSEN1",
"gene_hgnc_id": 9508,
"hgvs_c": "c.796G>A",
"hgvs_p": "p.Gly266Ser",
"transcript": "NM_000021.4",
"protein_id": "NP_000012.1",
"transcript_support_level": null,
"aa_start": 266,
"aa_end": null,
"aa_length": 467,
"cds_start": 796,
"cds_end": null,
"cds_length": 1404,
"cdna_start": 1008,
"cdna_end": null,
"cdna_length": 6018,
"mane_select": "ENST00000324501.10",
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "G",
"aa_alt": "S",
"canonical": true,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PSEN1",
"gene_hgnc_id": 9508,
"hgvs_c": "c.796G>A",
"hgvs_p": "p.Gly266Ser",
"transcript": "ENST00000324501.10",
"protein_id": "ENSP00000326366.5",
"transcript_support_level": 1,
"aa_start": 266,
"aa_end": null,
"aa_length": 467,
"cds_start": 796,
"cds_end": null,
"cds_length": 1404,
"cdna_start": 1008,
"cdna_end": null,
"cdna_length": 6018,
"mane_select": "NM_000021.4",
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "G",
"aa_alt": "S",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PSEN1",
"gene_hgnc_id": 9508,
"hgvs_c": "c.784G>A",
"hgvs_p": "p.Gly262Ser",
"transcript": "ENST00000357710.8",
"protein_id": "ENSP00000350342.4",
"transcript_support_level": 1,
"aa_start": 262,
"aa_end": null,
"aa_length": 463,
"cds_start": 784,
"cds_end": null,
"cds_length": 1392,
"cdna_start": 1056,
"cdna_end": null,
"cdna_length": 2776,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "G",
"aa_alt": "S",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PSEN1",
"gene_hgnc_id": 9508,
"hgvs_c": "c.784G>A",
"hgvs_p": "p.Gly262Ser",
"transcript": "ENST00000394164.5",
"protein_id": "ENSP00000377719.1",
"transcript_support_level": 1,
"aa_start": 262,
"aa_end": null,
"aa_length": 463,
"cds_start": 784,
"cds_end": null,
"cds_length": 1392,
"cdna_start": 1326,
"cdna_end": null,
"cdna_length": 3046,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": true,
"consequences": [
"non_coding_transcript_exon_variant"
],
"exon_rank": 6,
"exon_rank_end": null,
"exon_count": 10,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PSEN1",
"gene_hgnc_id": 9508,
"hgvs_c": "n.796G>A",
"hgvs_p": null,
"transcript": "ENST00000553855.5",
"protein_id": "ENSP00000452242.1",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": -4,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 1254,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": true,
"consequences": [
"non_coding_transcript_exon_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PSEN1",
"gene_hgnc_id": 9508,
"hgvs_c": "n.784G>A",
"hgvs_p": null,
"transcript": "ENST00000555386.6",
"protein_id": "ENSP00000450845.1",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": -4,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 1752,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "G",
"aa_alt": "S",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PSEN1",
"gene_hgnc_id": 9508,
"hgvs_c": "c.823G>A",
"hgvs_p": "p.Gly275Ser",
"transcript": "ENST00000700320.1",
"protein_id": "ENSP00000514947.1",
"transcript_support_level": null,
"aa_start": 275,
"aa_end": null,
"aa_length": 476,
"cds_start": 823,
"cds_end": null,
"cds_length": 1431,
"cdna_start": 1035,
"cdna_end": null,
"cdna_length": 6034,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "G",
"aa_alt": "S",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 9,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PSEN1",
"gene_hgnc_id": 9508,
"hgvs_c": "c.796G>A",
"hgvs_p": "p.Gly266Ser",
"transcript": "ENST00000554131.6",
"protein_id": "ENSP00000451915.2",
"transcript_support_level": 3,
"aa_start": 266,
"aa_end": null,
"aa_length": 467,
"cds_start": 796,
"cds_end": null,
"cds_length": 1404,
"cdna_start": 1060,
"cdna_end": null,
"cdna_length": 6064,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "G",
"aa_alt": "S",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PSEN1",
"gene_hgnc_id": 9508,
"hgvs_c": "c.796G>A",
"hgvs_p": "p.Gly266Ser",
"transcript": "ENST00000700267.1",
"protein_id": "ENSP00000514903.1",
"transcript_support_level": null,
"aa_start": 266,
"aa_end": null,
"aa_length": 467,
"cds_start": 796,
"cds_end": null,
"cds_length": 1404,
"cdna_start": 953,
"cdna_end": null,
"cdna_length": 5957,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "G",
"aa_alt": "S",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PSEN1",
"gene_hgnc_id": 9508,
"hgvs_c": "c.796G>A",
"hgvs_p": "p.Gly266Ser",
"transcript": "ENST00000700268.1",
"protein_id": "ENSP00000514904.1",
"transcript_support_level": null,
"aa_start": 266,
"aa_end": null,
"aa_length": 467,
"cds_start": 796,
"cds_end": null,
"cds_length": 1404,
"cdna_start": 1072,
"cdna_end": null,
"cdna_length": 6076,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "G",
"aa_alt": "S",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 9,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PSEN1",
"gene_hgnc_id": 9508,
"hgvs_c": "c.796G>A",
"hgvs_p": "p.Gly266Ser",
"transcript": "ENST00000700269.1",
"protein_id": "ENSP00000514905.1",
"transcript_support_level": null,
"aa_start": 266,
"aa_end": null,
"aa_length": 467,
"cds_start": 796,
"cds_end": null,
"cds_length": 1404,
"cdna_start": 1112,
"cdna_end": null,
"cdna_length": 6116,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "G",
"aa_alt": "S",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PSEN1",
"gene_hgnc_id": 9508,
"hgvs_c": "c.796G>A",
"hgvs_p": "p.Gly266Ser",
"transcript": "ENST00000700306.1",
"protein_id": "ENSP00000514933.1",
"transcript_support_level": null,
"aa_start": 266,
"aa_end": null,
"aa_length": 467,
"cds_start": 796,
"cds_end": null,
"cds_length": 1404,
"cdna_start": 1085,
"cdna_end": null,
"cdna_length": 6089,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "G",
"aa_alt": "S",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PSEN1",
"gene_hgnc_id": 9508,
"hgvs_c": "c.796G>A",
"hgvs_p": "p.Gly266Ser",
"transcript": "ENST00000700317.1",
"protein_id": "ENSP00000514944.1",
"transcript_support_level": null,
"aa_start": 266,
"aa_end": null,
"aa_length": 467,
"cds_start": 796,
"cds_end": null,
"cds_length": 1404,
"cdna_start": 976,
"cdna_end": null,
"cdna_length": 5975,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "G",
"aa_alt": "S",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PSEN1",
"gene_hgnc_id": 9508,
"hgvs_c": "c.796G>A",
"hgvs_p": "p.Gly266Ser",
"transcript": "ENST00000700321.1",
"protein_id": "ENSP00000514948.1",
"transcript_support_level": null,
"aa_start": 266,
"aa_end": null,
"aa_length": 467,
"cds_start": 796,
"cds_end": null,
"cds_length": 1404,
"cdna_start": 1010,
"cdna_end": null,
"cdna_length": 6014,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "G",
"aa_alt": "S",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 9,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PSEN1",
"gene_hgnc_id": 9508,
"hgvs_c": "c.796G>A",
"hgvs_p": "p.Gly266Ser",
"transcript": "ENST00000700323.1",
"protein_id": "ENSP00000514950.1",
"transcript_support_level": null,
"aa_start": 266,
"aa_end": null,
"aa_length": 467,
"cds_start": 796,
"cds_end": null,
"cds_length": 1404,
"cdna_start": 1052,
"cdna_end": null,
"cdna_length": 6056,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "G",
"aa_alt": "S",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 9,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PSEN1",
"gene_hgnc_id": 9508,
"hgvs_c": "c.796G>A",
"hgvs_p": "p.Gly266Ser",
"transcript": "ENST00000700375.1",
"protein_id": "ENSP00000514966.1",
"transcript_support_level": null,
"aa_start": 266,
"aa_end": null,
"aa_length": 467,
"cds_start": 796,
"cds_end": null,
"cds_length": 1404,
"cdna_start": 1071,
"cdna_end": null,
"cdna_length": 6075,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "G",
"aa_alt": "S",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PSEN1",
"gene_hgnc_id": 9508,
"hgvs_c": "c.796G>A",
"hgvs_p": "p.Gly266Ser",
"transcript": "ENST00000700378.1",
"protein_id": "ENSP00000514968.1",
"transcript_support_level": null,
"aa_start": 266,
"aa_end": null,
"aa_length": 467,
"cds_start": 796,
"cds_end": null,
"cds_length": 1404,
"cdna_start": 1392,
"cdna_end": null,
"cdna_length": 6396,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "G",
"aa_alt": "S",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PSEN1",
"gene_hgnc_id": 9508,
"hgvs_c": "c.784G>A",
"hgvs_p": "p.Gly262Ser",
"transcript": "NM_007318.3",
"protein_id": "NP_015557.2",
"transcript_support_level": null,
"aa_start": 262,
"aa_end": null,
"aa_length": 463,
"cds_start": 784,
"cds_end": null,
"cds_length": 1392,
"cdna_start": 996,
"cdna_end": null,
"cdna_length": 6006,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "G",
"aa_alt": "S",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PSEN1",
"gene_hgnc_id": 9508,
"hgvs_c": "c.784G>A",
"hgvs_p": "p.Gly262Ser",
"transcript": "ENST00000553599.6",
"protein_id": "ENSP00000452477.2",
"transcript_support_level": 4,
"aa_start": 262,
"aa_end": null,
"aa_length": 463,
"cds_start": 784,
"cds_end": null,
"cds_length": 1392,
"cdna_start": 1100,
"cdna_end": null,
"cdna_length": 6099,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "G",
"aa_alt": "S",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PSEN1",
"gene_hgnc_id": 9508,
"hgvs_c": "c.784G>A",
"hgvs_p": "p.Gly262Ser",
"transcript": "ENST00000556951.6",
"protein_id": "ENSP00000450551.2",
"transcript_support_level": 2,
"aa_start": 262,
"aa_end": null,
"aa_length": 463,
"cds_start": 784,
"cds_end": null,
"cds_length": 1392,
"cdna_start": 1063,
"cdna_end": null,
"cdna_length": 6062,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "G",
"aa_alt": "S",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PSEN1",
"gene_hgnc_id": 9508,
"hgvs_c": "c.784G>A",
"hgvs_p": "p.Gly262Ser",
"transcript": "ENST00000700265.1",
"protein_id": "ENSP00000514901.1",
"transcript_support_level": null,
"aa_start": 262,
"aa_end": null,
"aa_length": 463,
"cds_start": 784,
"cds_end": null,
"cds_length": 1392,
"cdna_start": 912,
"cdna_end": null,
"cdna_length": 5911,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "G",
"aa_alt": "S",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 9,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PSEN1",
"gene_hgnc_id": 9508,
"hgvs_c": "c.784G>A",
"hgvs_p": "p.Gly262Ser",
"transcript": "ENST00000700273.1",
"protein_id": "ENSP00000514908.1",
"transcript_support_level": null,
"aa_start": 262,
"aa_end": null,
"aa_length": 463,
"cds_start": 784,
"cds_end": null,
"cds_length": 1392,
"cdna_start": 1092,
"cdna_end": null,
"cdna_length": 6091,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "G",
"aa_alt": "S",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 9,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PSEN1",
"gene_hgnc_id": 9508,
"hgvs_c": "c.784G>A",
"hgvs_p": "p.Gly262Ser",
"transcript": "ENST00000700313.1",
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