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GeneBe API Showcase

This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.

API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.

Documentation & Advanced Usage

Complete API documentation:docs.genebe.net/docs/api/overview/

Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/

Python client for pandas:pypi.org/project/genebe/

Java CLI for VCF files:github.com/pstawinski/genebe-cli

All tools documented at:docs.genebe.net

API Request Examples for Variant: 14-73953419-A-ATT (hg38)

Bash / cURL Example

bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=14&pos=73953419&ref=A&alt=ATT&genome=hg38&allGenes=true"

API Response

json
{
  "variants": [
    {
      "chr": "14",
      "pos": 73953419,
      "ref": "A",
      "alt": "ATT",
      "effect": "intron_variant",
      "transcript": "NM_182476.3",
      "consequences": [
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 12,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "COQ6",
          "gene_hgnc_id": 20233,
          "hgvs_c": "c.164-13_164-12dupTT",
          "hgvs_p": null,
          "transcript": "NM_182476.3",
          "protein_id": "NP_872282.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 468,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 1407,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": "ENST00000334571.7",
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_182476.3"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": true,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 12,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "COQ6",
          "gene_hgnc_id": 20233,
          "hgvs_c": "c.164-16_164-15insTT",
          "hgvs_p": null,
          "transcript": "ENST00000334571.7",
          "protein_id": "ENSP00000333946.2",
          "transcript_support_level": 1,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 468,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 1407,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": "NM_182476.3",
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000334571.7"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": true,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 4,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "COQ6",
          "gene_hgnc_id": 20233,
          "hgvs_c": "n.187-16_187-15insTT",
          "hgvs_p": null,
          "transcript": "ENST00000554193.5",
          "protein_id": null,
          "transcript_support_level": 1,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": null,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "retained_intron",
          "feature": "ENST00000554193.5"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": true,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "COQ6",
          "gene_hgnc_id": 20233,
          "hgvs_c": "n.89-16_89-15insTT",
          "hgvs_p": null,
          "transcript": "ENST00000554341.6",
          "protein_id": "ENSP00000450736.2",
          "transcript_support_level": 1,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": null,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "nonsense_mediated_decay",
          "feature": "ENST00000554341.6"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": true,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 5,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "COQ6",
          "gene_hgnc_id": 20233,
          "hgvs_c": "n.198-16_198-15insTT",
          "hgvs_p": null,
          "transcript": "ENST00000556300.6",
          "protein_id": null,
          "transcript_support_level": 1,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": null,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "retained_intron",
          "feature": "ENST00000556300.6"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 12,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "COQ6",
          "gene_hgnc_id": 20233,
          "hgvs_c": "c.164-16_164-15insTT",
          "hgvs_p": null,
          "transcript": "ENST00000963229.1",
          "protein_id": "ENSP00000633288.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 467,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 1404,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000963229.1"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 12,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "COQ6",
          "gene_hgnc_id": 20233,
          "hgvs_c": "c.164-64_164-63insTT",
          "hgvs_p": null,
          "transcript": "ENST00000901628.1",
          "protein_id": "ENSP00000571687.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 452,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 1359,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000901628.1"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "COQ6",
          "gene_hgnc_id": 20233,
          "hgvs_c": "c.164-13_164-12dupTT",
          "hgvs_p": null,
          "transcript": "NM_001425255.1",
          "protein_id": "NP_001412184.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 443,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 1332,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001425255.1"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
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          "exon_count": 12,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "COQ6",
          "gene_hgnc_id": 20233,
          "hgvs_c": "c.89-13_89-12dupTT",
          "hgvs_p": null,
          "transcript": "NM_182480.3",
          "protein_id": "NP_872286.2",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 443,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 1332,
          "cdna_start": null,
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          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_182480.3"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 12,
          "intron_rank": 1,
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          "gene_symbol": "COQ6",
          "gene_hgnc_id": 20233,
          "hgvs_c": "c.89-16_89-15insTT",
          "hgvs_p": null,
          "transcript": "ENST00000394026.8",
          "protein_id": "ENSP00000377594.4",
          "transcript_support_level": 2,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 443,
          "cds_start": null,
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          "cdna_start": null,
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        {
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          "gene_symbol": "COQ6",
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          "hgvs_c": "c.164-16_164-15insTT",
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          "transcript": "ENST00000901627.1",
          "protein_id": "ENSP00000571686.1",
          "transcript_support_level": null,
          "aa_start": null,
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          "aa_length": 435,
          "cds_start": null,
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          "cdna_start": null,
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        {
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        {
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        {
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        {
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        {
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          "gene_symbol": "COQ6",
          "gene_hgnc_id": 20233,
          "hgvs_c": "c.-3-16_-3-15insTT",
          "hgvs_p": null,
          "transcript": "ENST00000629426.2",
          "protein_id": "ENSP00000486650.1",
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